EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009879 (Gene tree)
Gene ID: 108255904
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6 like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18866 bases
Position: chr22:7672147-7691012
Accession: 108255904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014491	Exo_endo_phos	PF03372.23	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015101	-	3920	XM_017452263	ENSIPUP00000014491	549 (aa)	XP_017307752	A0A2D0PP25

Gene Model

Click here to download ENSIPUG00000009879's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009879	cnot6l	100	73.118	ENSIPUG00000017482	cnot6b	100	73.118
ENSIPUG00000009879	cnot6l	99	75.045	ENSIPUG00000019831	cnot6a	99	75.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009879	cnot6l	100	82.246	ENSG00000138767	CNOT6L	100	87.342	Homo_sapiens
ENSIPUG00000009879	cnot6l	100	88.969	ENSAPOG00000005894	cnot6l	100	89.693	Acanthochromis_polyacanthus
ENSIPUG00000009879	cnot6l	100	82.065	ENSAMEG00000005570	CNOT6L	99	82.428	Ailuropoda_melanoleuca
ENSIPUG00000009879	cnot6l	100	88.608	ENSACIG00000002515	cnot6l	100	89.331	Amphilophus_citrinellus
ENSIPUG00000009879	cnot6l	100	85.172	ENSAOCG00000006705	cnot6l	100	85.895	Amphiprion_ocellaris
ENSIPUG00000009879	cnot6l	100	85.172	ENSAPEG00000020035	cnot6l	100	85.895	Amphiprion_percula
ENSIPUG00000009879	cnot6l	100	89.512	ENSATEG00000008774	cnot6l	100	90.054	Anabas_testudineus
ENSIPUG00000009879	cnot6l	100	80.790	ENSAPLG00000003448	CNOT6L	100	81.149	Anas_platyrhynchos
ENSIPUG00000009879	cnot6l	99	81.785	ENSACAG00000012099	CNOT6L	99	81.785	Anolis_carolinensis
ENSIPUG00000009879	cnot6l	100	82.246	ENSANAG00000023917	CNOT6L	99	82.609	Aotus_nancymaae
ENSIPUG00000009879	cnot6l	100	87.703	ENSACLG00000000879	cnot6l	100	88.427	Astatotilapia_calliptera
ENSIPUG00000009879	cnot6l	100	94.171	ENSAMXG00000008943	cnot6l	98	94.171	Astyanax_mexicanus
ENSIPUG00000009879	cnot6l	100	82.246	ENSBTAG00000049571	CNOT6L	99	82.609	Bos_taurus
ENSIPUG00000009879	cnot6l	100	82.246	ENSCJAG00000014846	CNOT6L	99	82.609	Callithrix_jacchus
ENSIPUG00000009879	cnot6l	100	82.246	ENSCAFG00000008699	CNOT6L	99	82.609	Canis_familiaris
ENSIPUG00000009879	cnot6l	100	82.000	ENSCAFG00020011108	CNOT6L	100	82.364	Canis_lupus_dingo
ENSIPUG00000009879	cnot6l	100	82.246	ENSCHIG00000006297	CNOT6L	99	82.609	Capra_hircus
ENSIPUG00000009879	cnot6l	100	82.246	ENSTSYG00000009068	CNOT6L	100	82.609	Carlito_syrichta
ENSIPUG00000009879	cnot6l	86	86.842	ENSCPOG00000010337	CNOT6L	99	86.842	Cavia_porcellus
ENSIPUG00000009879	cnot6l	100	82.246	ENSCCAG00000025000	CNOT6L	99	82.609	Cebus_capucinus
ENSIPUG00000009879	cnot6l	100	82.246	ENSCATG00000029623	CNOT6L	99	82.609	Cercocebus_atys
ENSIPUG00000009879	cnot6l	100	82.428	ENSCLAG00000004598	CNOT6L	99	82.246	Chinchilla_lanigera
ENSIPUG00000009879	cnot6l	100	82.246	ENSCSAG00000004580	CNOT6L	99	82.609	Chlorocebus_sabaeus
ENSIPUG00000009879	cnot6l	74	72.857	ENSCHOG00000001108	-	69	77.143	Choloepus_hoffmanni
ENSIPUG00000009879	cnot6l	100	81.341	ENSCPBG00000019403	CNOT6L	100	81.884	Chrysemys_picta_bellii
ENSIPUG00000009879	cnot6l	100	82.246	ENSCANG00000028583	CNOT6L	99	82.609	Colobus_angolensis_palliatus
ENSIPUG00000009879	cnot6l	100	80.978	ENSCGRG00001022099	Cnot6l	100	81.341	Cricetulus_griseus_chok1gshd
ENSIPUG00000009879	cnot6l	100	80.254	ENSCGRG00000000543	Cnot6l	100	80.616	Cricetulus_griseus_crigri
ENSIPUG00000009879	cnot6l	76	85.132	ENSCSEG00000010395	-	98	85.132	Cynoglossus_semilaevis
ENSIPUG00000009879	cnot6l	100	86.282	ENSCSEG00000014001	cnot6l	100	86.282	Cynoglossus_semilaevis
ENSIPUG00000009879	cnot6l	98	90.706	ENSCVAG00000021683	cnot6l	96	90.706	Cyprinodon_variegatus
ENSIPUG00000009879	cnot6l	99	92.701	ENSDARG00000054597	cnot6l	98	92.701	Danio_rerio
ENSIPUG00000009879	cnot6l	100	74.101	ENSDNOG00000004229	CNOT6L	99	77.709	Dasypus_novemcinctus
ENSIPUG00000009879	cnot6l	100	74.638	ENSDORG00000011458	Cnot6l	100	74.457	Dipodomys_ordii
ENSIPUG00000009879	cnot6l	100	70.693	ENSEBUG00000004849	cnot6l	100	70.693	Eptatretus_burgeri
ENSIPUG00000009879	cnot6l	87	83.610	ENSEASG00005016429	CNOT6L	91	83.402	Equus_asinus_asinus
ENSIPUG00000009879	cnot6l	94	81.625	ENSECAG00000001582	CNOT6L	87	83.402	Equus_caballus
ENSIPUG00000009879	cnot6l	99	88.545	ENSELUG00000013353	cnot6l	87	88.545	Esox_lucius
ENSIPUG00000009879	cnot6l	100	82.246	ENSFCAG00000008322	CNOT6L	99	82.609	Felis_catus
ENSIPUG00000009879	cnot6l	100	81.851	ENSFALG00000008515	CNOT6L	99	82.396	Ficedula_albicollis
ENSIPUG00000009879	cnot6l	100	82.609	ENSFDAG00000007719	CNOT6L	95	82.428	Fukomys_damarensis
ENSIPUG00000009879	cnot6l	100	80.180	ENSFHEG00000012364	cnot6l	100	80.541	Fundulus_heteroclitus
ENSIPUG00000009879	cnot6l	92	65.945	ENSGMOG00000011077	-	99	65.945	Gadus_morhua
ENSIPUG00000009879	cnot6l	87	78.542	ENSGMOG00000000730	cnot6l	99	78.542	Gadus_morhua
ENSIPUG00000009879	cnot6l	100	81.488	ENSGALG00000010333	CNOT6L	90	81.851	Gallus_gallus
ENSIPUG00000009879	cnot6l	97	88.037	ENSGAFG00000006105	cnot6l	99	88.037	Gambusia_affinis
ENSIPUG00000009879	cnot6l	89	81.633	ENSGAGG00000008605	CNOT6L	94	81.633	Gopherus_agassizii
ENSIPUG00000009879	cnot6l	100	82.246	ENSGGOG00000023412	CNOT6L	98	82.609	Gorilla_gorilla
ENSIPUG00000009879	cnot6l	100	87.884	ENSHBUG00000004755	cnot6l	95	90.000	Haplochromis_burtoni
ENSIPUG00000009879	cnot6l	100	82.609	ENSHGLG00000006452	CNOT6L	100	82.428	Heterocephalus_glaber_female
ENSIPUG00000009879	cnot6l	100	82.609	ENSHGLG00100012384	CNOT6L	98	82.428	Heterocephalus_glaber_male
ENSIPUG00000009879	cnot6l	100	75.742	ENSHCOG00000009512	cnot6l	100	76.182	Hippocampus_comes
ENSIPUG00000009879	cnot6l	100	82.246	ENSSTOG00000015293	CNOT6L	100	82.609	Ictidomys_tridecemlineatus
ENSIPUG00000009879	cnot6l	100	81.703	ENSJJAG00000020583	Cnot6l	99	82.065	Jaculus_jaculus
ENSIPUG00000009879	cnot6l	100	87.884	ENSKMAG00000004165	cnot6l	100	88.246	Kryptolebias_marmoratus
ENSIPUG00000009879	cnot6l	100	87.296	ENSLBEG00000027202	cnot6l	100	87.296	Labrus_bergylta
ENSIPUG00000009879	cnot6l	99	82.601	ENSLACG00000004684	CNOT6L	99	82.234	Latimeria_chalumnae
ENSIPUG00000009879	cnot6l	100	83.607	ENSLOCG00000007420	cnot6l	92	83.607	Lepisosteus_oculatus
ENSIPUG00000009879	cnot6l	100	82.246	ENSLAFG00000011449	CNOT6L	100	80.851	Loxodonta_africana
ENSIPUG00000009879	cnot6l	100	82.246	ENSMFAG00000044296	CNOT6L	99	82.609	Macaca_fascicularis
ENSIPUG00000009879	cnot6l	100	82.246	ENSMMUG00000045609	CNOT6L	98	82.609	Macaca_mulatta
ENSIPUG00000009879	cnot6l	100	82.246	ENSMNEG00000041259	CNOT6L	100	82.609	Macaca_nemestrina
ENSIPUG00000009879	cnot6l	100	82.246	ENSMLEG00000029198	CNOT6L	98	82.609	Mandrillus_leucophaeus
ENSIPUG00000009879	cnot6l	99	88.587	ENSMAMG00000016954	cnot6l	98	89.312	Mastacembelus_armatus
ENSIPUG00000009879	cnot6l	100	87.703	ENSMZEG00005020235	cnot6l	100	88.427	Maylandia_zebra
ENSIPUG00000009879	cnot6l	100	81.488	ENSMGAG00000005144	CNOT6L	99	81.851	Meleagris_gallopavo
ENSIPUG00000009879	cnot6l	100	81.884	ENSMICG00000017026	CNOT6L	99	82.246	Microcebus_murinus
ENSIPUG00000009879	cnot6l	100	80.978	ENSMOCG00000009451	Cnot6l	99	81.341	Microtus_ochrogaster
ENSIPUG00000009879	cnot6l	100	88.608	ENSMMOG00000014621	cnot6l	100	88.608	Mola_mola
ENSIPUG00000009879	cnot6l	100	81.522	ENSMODG00000011744	CNOT6L	75	81.884	Monodelphis_domestica
ENSIPUG00000009879	cnot6l	100	88.448	ENSMALG00000006354	cnot6l	100	88.809	Monopterus_albus
ENSIPUG00000009879	cnot6l	100	80.978	MGP_CAROLIEiJ_G0027429	Cnot6l	99	82.569	Mus_caroli
ENSIPUG00000009879	cnot6l	100	80.978	ENSMUSG00000034724	Cnot6l	99	82.569	Mus_musculus
ENSIPUG00000009879	cnot6l	100	80.978	MGP_PahariEiJ_G0017207	Cnot6l	100	81.341	Mus_pahari
ENSIPUG00000009879	cnot6l	100	80.978	MGP_SPRETEiJ_G0028426	Cnot6l	100	81.341	Mus_spretus
ENSIPUG00000009879	cnot6l	95	77.947	ENSMPUG00000003895	CNOT6L	100	78.327	Mustela_putorius_furo
ENSIPUG00000009879	cnot6l	93	82.171	ENSMLUG00000000936	CNOT6L	100	82.558	Myotis_lucifugus
ENSIPUG00000009879	cnot6l	100	80.797	ENSNGAG00000019803	Cnot6l	100	81.159	Nannospalax_galili
ENSIPUG00000009879	cnot6l	90	85.743	ENSNBRG00000016345	cnot6l	81	87.149	Neolamprologus_brichardi
ENSIPUG00000009879	cnot6l	100	82.246	ENSNLEG00000028820	CNOT6L	99	82.609	Nomascus_leucogenys
ENSIPUG00000009879	cnot6l	80	69.526	ENSMEUG00000009767	-	79	70.354	Notamacropus_eugenii
ENSIPUG00000009879	cnot6l	100	82.609	ENSODEG00000004161	CNOT6L	99	82.428	Octodon_degus
ENSIPUG00000009879	cnot6l	100	87.455	ENSONIG00000013992	cnot6l	97	88.172	Oreochromis_niloticus
ENSIPUG00000009879	cnot6l	100	81.884	ENSOANG00000003561	CNOT6L	100	82.246	Ornithorhynchus_anatinus
ENSIPUG00000009879	cnot6l	100	82.246	ENSOCUG00000002497	CNOT6L	99	82.609	Oryctolagus_cuniculus
ENSIPUG00000009879	cnot6l	100	86.257	ENSORLG00000018874	cnot6l	100	86.438	Oryzias_latipes
ENSIPUG00000009879	cnot6l	100	86.618	ENSOMEG00000010026	cnot6l	100	86.618	Oryzias_melastigma
ENSIPUG00000009879	cnot6l	100	78.995	ENSOGAG00000012122	CNOT6L	100	79.354	Otolemur_garnettii
ENSIPUG00000009879	cnot6l	100	82.246	ENSOARG00000017771	CNOT6L	99	82.609	Ovis_aries
ENSIPUG00000009879	cnot6l	84	86.842	ENSPPAG00000034242	-	98	86.842	Pan_paniscus
ENSIPUG00000009879	cnot6l	100	79.529	ENSPPAG00000030178	-	100	79.891	Pan_paniscus
ENSIPUG00000009879	cnot6l	100	82.246	ENSPPRG00000008857	CNOT6L	99	82.609	Panthera_pardus
ENSIPUG00000009879	cnot6l	100	82.246	ENSPTIG00000015698	CNOT6L	99	82.609	Panthera_tigris_altaica
ENSIPUG00000009879	cnot6l	100	82.246	ENSPTRG00000016198	CNOT6L	99	82.609	Pan_troglodytes
ENSIPUG00000009879	cnot6l	84	86.842	ENSPTRG00000045291	-	99	86.842	Pan_troglodytes
ENSIPUG00000009879	cnot6l	100	82.246	ENSPANG00000007831	CNOT6L	99	82.609	Papio_anubis
ENSIPUG00000009879	cnot6l	100	87.796	ENSPKIG00000002892	cnot6l	100	87.796	Paramormyrops_kingsleyae
ENSIPUG00000009879	cnot6l	100	81.341	ENSPSIG00000016241	CNOT6L	99	82.065	Pelodiscus_sinensis
ENSIPUG00000009879	cnot6l	99	85.165	ENSPMGG00000004021	cnot6l	100	84.755	Periophthalmus_magnuspinnatus
ENSIPUG00000009879	cnot6l	100	80.978	ENSPEMG00000011554	Cnot6l	100	81.341	Peromyscus_maniculatus_bairdii
ENSIPUG00000009879	cnot6l	96	70.501	ENSPMAG00000005706	cnot6l	99	69.272	Petromyzon_marinus
ENSIPUG00000009879	cnot6l	100	80.978	ENSPCIG00000027504	-	100	81.341	Phascolarctos_cinereus
ENSIPUG00000009879	cnot6l	100	88.065	ENSPFOG00000013163	cnot6l	100	88.065	Poecilia_formosa
ENSIPUG00000009879	cnot6l	100	87.884	ENSPLAG00000019862	cnot6l	100	87.884	Poecilia_latipinna
ENSIPUG00000009879	cnot6l	100	88.246	ENSPMEG00000015834	cnot6l	100	88.246	Poecilia_mexicana
ENSIPUG00000009879	cnot6l	100	87.703	ENSPREG00000003561	cnot6l	100	87.703	Poecilia_reticulata
ENSIPUG00000009879	cnot6l	100	82.246	ENSPPYG00000014869	CNOT6L	100	82.609	Pongo_abelii
ENSIPUG00000009879	cnot6l	100	53.804	ENSPCAG00000016617	CNOT6L	94	54.167	Procavia_capensis
ENSIPUG00000009879	cnot6l	100	82.246	ENSPCOG00000014669	CNOT6L	99	82.609	Propithecus_coquereli
ENSIPUG00000009879	cnot6l	83	83.784	ENSPVAG00000002690	CNOT6L	78	83.784	Pteropus_vampyrus
ENSIPUG00000009879	cnot6l	91	85.686	ENSPNYG00000006717	cnot6l	92	86.481	Pundamilia_nyererei
ENSIPUG00000009879	cnot6l	100	94.536	ENSPNAG00000003537	cnot6l	98	94.536	Pygocentrus_nattereri
ENSIPUG00000009879	cnot6l	100	80.978	ENSRNOG00000002075	Cnot6l	100	81.341	Rattus_norvegicus
ENSIPUG00000009879	cnot6l	100	81.884	ENSRBIG00000027644	CNOT6L	99	82.246	Rhinopithecus_bieti
ENSIPUG00000009879	cnot6l	100	82.065	ENSRROG00000031003	CNOT6L	100	82.428	Rhinopithecus_roxellana
ENSIPUG00000009879	cnot6l	100	82.246	ENSSBOG00000028521	CNOT6L	100	82.609	Saimiri_boliviensis_boliviensis
ENSIPUG00000009879	cnot6l	100	81.522	ENSSHAG00000006072	CNOT6L	99	81.884	Sarcophilus_harrisii
ENSIPUG00000009879	cnot6l	100	87.978	ENSSFOG00015019044	cnot6l	100	87.978	Scleropages_formosus
ENSIPUG00000009879	cnot6l	100	86.980	ENSSMAG00000015568	cnot6l	100	86.980	Scophthalmus_maximus
ENSIPUG00000009879	cnot6l	100	90.054	ENSSDUG00000018426	cnot6l	100	90.054	Seriola_dumerili
ENSIPUG00000009879	cnot6l	100	89.873	ENSSLDG00000000335	cnot6l	100	89.873	Seriola_lalandi_dorsalis
ENSIPUG00000009879	cnot6l	100	81.703	ENSSPUG00000002016	CNOT6L	100	81.522	Sphenodon_punctatus
ENSIPUG00000009879	cnot6l	100	88.788	ENSSPAG00000022932	cnot6l	100	89.512	Stegastes_partitus
ENSIPUG00000009879	cnot6l	100	82.246	ENSSSCG00000008989	CNOT6L	100	82.609	Sus_scrofa
ENSIPUG00000009879	cnot6l	100	81.488	ENSTGUG00000001737	-	99	82.033	Taeniopygia_guttata
ENSIPUG00000009879	cnot6l	100	87.523	ENSTRUG00000004332	cnot6l	100	87.523	Takifugu_rubripes
ENSIPUG00000009879	cnot6l	100	86.799	ENSTNIG00000016717	cnot6l	100	86.799	Tetraodon_nigroviridis
ENSIPUG00000009879	cnot6l	87	78.423	ENSTBEG00000016519	CNOT6L	96	78.216	Tupaia_belangeri
ENSIPUG00000009879	cnot6l	87	83.195	ENSTTRG00000005606	CNOT6L	99	82.988	Tursiops_truncatus
ENSIPUG00000009879	cnot6l	100	82.065	ENSUAMG00000026982	CNOT6L	100	82.428	Ursus_americanus
ENSIPUG00000009879	cnot6l	100	82.065	ENSUMAG00000007955	CNOT6L	99	82.428	Ursus_maritimus
ENSIPUG00000009879	cnot6l	100	78.623	ENSVPAG00000010892	CNOT6L	99	78.986	Vicugna_pacos
ENSIPUG00000009879	cnot6l	100	82.246	ENSVVUG00000024858	CNOT6L	100	86.982	Vulpes_vulpes
ENSIPUG00000009879	cnot6l	100	81.884	ENSXETG00000000372	cnot6l	99	81.522	Xenopus_tropicalis
ENSIPUG00000009879	cnot6l	100	87.884	ENSXMAG00000002900	cnot6l	100	87.884	Xiphophorus_maculatus