EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009896 (Gene tree)
Gene ID: 108267625
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11536 bases
Position: chr7:8737637-8749172
Accession: 108267625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014592	KH_1	PF00013.29	3.1e-67	1	4
ENSIPUP00000014592	KH_1	PF00013.29	3.1e-67	2	4
ENSIPUP00000014592	KH_1	PF00013.29	3.1e-67	3	4
ENSIPUP00000014592	KH_1	PF00013.29	3.1e-67	4	4
ENSIPUP00000014607	KH_1	PF00013.29	3.6e-67	1	4
ENSIPUP00000014607	KH_1	PF00013.29	3.6e-67	2	4
ENSIPUP00000014607	KH_1	PF00013.29	3.6e-67	3	4
ENSIPUP00000014607	KH_1	PF00013.29	3.6e-67	4	4
ENSIPUP00000014563	KH_1	PF00013.29	4.4e-67	1	4
ENSIPUP00000014563	KH_1	PF00013.29	4.4e-67	2	4
ENSIPUP00000014563	KH_1	PF00013.29	4.4e-67	3	4
ENSIPUP00000014563	KH_1	PF00013.29	4.4e-67	4	4
ENSIPUP00000014592	KH_2	PF07650.17	1.7e-21	1	2
ENSIPUP00000014592	KH_2	PF07650.17	1.7e-21	2	2
ENSIPUP00000014607	KH_2	PF07650.17	2.6e-21	1	2
ENSIPUP00000014607	KH_2	PF07650.17	2.6e-21	2	2
ENSIPUP00000014563	KH_2	PF07650.17	3.1e-21	1	2
ENSIPUP00000014563	KH_2	PF07650.17	3.1e-21	2	2
ENSIPUP00000014563	DUF1897	PF09005.10	2e-11	1	2
ENSIPUP00000014563	DUF1897	PF09005.10	2e-11	2	2
ENSIPUP00000014592	DUF1897	PF09005.10	4.1e-09	1	2
ENSIPUP00000014592	DUF1897	PF09005.10	4.1e-09	2	2
ENSIPUP00000014607	DUF1897	PF09005.10	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015219	-	1887	XM_017471886	ENSIPUP00000014607	628 (aa)	XP_017327375	-
ENSIPUT00000015173	-	6829	XM_017471880	ENSIPUP00000014563	653 (aa)	XP_017327369	-
ENSIPUT00000015204	-	1902	-	ENSIPUP00000014592	633 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000009896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009896	fubp1	58	47.541	ENSIPUG00000024819	pcbp2	69	43.836
ENSIPUG00000009896	fubp1	51	35.294	ENSIPUG00000006238	pcbp3	72	35.294
ENSIPUG00000009896	fubp1	98	52.219	ENSIPUG00000008034	khsrp	99	51.383
ENSIPUG00000009896	fubp1	54	30.890	ENSIPUG00000018651	nova1	51	35.821
ENSIPUG00000009896	fubp1	96	52.093	ENSIPUG00000019400	FUBP3	85	60.287
ENSIPUG00000009896	fubp1	54	42.254	ENSIPUG00000008212	pcbp4	67	42.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009896	fubp1	70	77.632	ENSG00000162613	FUBP1	100	74.164	Homo_sapiens
ENSIPUG00000009896	fubp1	99	81.279	ENSAPOG00000014845	fubp1	98	80.343	Acanthochromis_polyacanthus
ENSIPUG00000009896	fubp1	70	73.750	ENSAMEG00000007372	FUBP1	100	71.953	Ailuropoda_melanoleuca
ENSIPUG00000009896	fubp1	100	80.187	ENSACIG00000020024	fubp1	100	79.563	Amphilophus_citrinellus
ENSIPUG00000009896	fubp1	100	81.043	ENSAPEG00000012232	fubp1	100	79.147	Amphiprion_percula
ENSIPUG00000009896	fubp1	100	83.788	ENSATEG00000018619	fubp1	100	82.727	Anabas_testudineus
ENSIPUG00000009896	fubp1	65	79.567	ENSAPLG00000005965	FUBP1	100	73.171	Anas_platyrhynchos
ENSIPUG00000009896	fubp1	67	76.923	ENSACAG00000006310	FUBP1	96	70.732	Anolis_carolinensis
ENSIPUG00000009896	fubp1	100	84.825	ENSACLG00000006708	fubp1	100	83.612	Astatotilapia_calliptera
ENSIPUG00000009896	fubp1	88	89.326	ENSAMXG00000005525	fubp1	99	88.951	Astyanax_mexicanus
ENSIPUG00000009896	fubp1	70	77.851	ENSCJAG00000007062	FUBP1	100	74.277	Callithrix_jacchus
ENSIPUG00000009896	fubp1	70	76.840	ENSCAFG00000020361	FUBP1	100	74.316	Canis_familiaris
ENSIPUG00000009896	fubp1	65	79.177	ENSTSYG00000000148	FUBP1	100	74.595	Carlito_syrichta
ENSIPUG00000009896	fubp1	55	83.600	ENSCAPG00000011052	-	63	83.600	Cavia_aperea
ENSIPUG00000009896	fubp1	70	76.840	ENSCPOG00000002757	FUBP1	98	79.592	Cavia_porcellus
ENSIPUG00000009896	fubp1	91	60.548	ENSCCAG00000036537	FUBP1	100	57.284	Cebus_capucinus
ENSIPUG00000009896	fubp1	70	76.623	ENSCATG00000042126	FUBP1	100	74.164	Cercocebus_atys
ENSIPUG00000009896	fubp1	70	77.778	ENSCLAG00000005621	FUBP1	100	80.255	Chinchilla_lanigera
ENSIPUG00000009896	fubp1	70	76.623	ENSCSAG00000001402	FUBP1	100	74.164	Chlorocebus_sabaeus
ENSIPUG00000009896	fubp1	70	76.623	ENSCHOG00000008177	FUBP1	98	74.429	Choloepus_hoffmanni
ENSIPUG00000009896	fubp1	70	79.157	ENSCGRG00001007103	Fubp1	100	74.085	Cricetulus_griseus_chok1gshd
ENSIPUG00000009896	fubp1	65	78.673	ENSCGRG00000003372	Fubp1	98	78.912	Cricetulus_griseus_crigri
ENSIPUG00000009896	fubp1	100	84.019	ENSCSEG00000021412	fubp1	98	82.911	Cynoglossus_semilaevis
ENSIPUG00000009896	fubp1	99	83.587	ENSCVAG00000014487	fubp1	99	82.523	Cyprinodon_variegatus
ENSIPUG00000009896	fubp1	100	82.169	ENSDARG00000029248	fubp1	100	82.946	Danio_rerio
ENSIPUG00000009896	fubp1	80	61.538	ENSDNOG00000034565	-	78	61.538	Dasypus_novemcinctus
ENSIPUG00000009896	fubp1	70	78.097	ENSDORG00000016534	Fubp1	98	74.277	Dipodomys_ordii
ENSIPUG00000009896	fubp1	75	77.101	ENSETEG00000000948	-	59	77.391	Echinops_telfairi
ENSIPUG00000009896	fubp1	66	70.588	ENSEBUG00000016143	fubp1	64	65.714	Eptatretus_burgeri
ENSIPUG00000009896	fubp1	73	84.899	ENSEEUG00000001287	FUBP1	87	72.131	Erinaceus_europaeus
ENSIPUG00000009896	fubp1	100	81.709	ENSELUG00000007990	fubp1	100	81.259	Esox_lucius
ENSIPUG00000009896	fubp1	70	77.753	ENSFALG00000005768	FUBP1	97	72.282	Ficedula_albicollis
ENSIPUG00000009896	fubp1	70	76.840	ENSFDAG00000014210	FUBP1	100	78.912	Fukomys_damarensis
ENSIPUG00000009896	fubp1	100	83.636	ENSFHEG00000005230	fubp1	100	83.333	Fundulus_heteroclitus
ENSIPUG00000009896	fubp1	100	76.489	ENSGMOG00000003370	fubp1	100	74.451	Gadus_morhua
ENSIPUG00000009896	fubp1	70	76.923	ENSGALG00000008939	FUBP1	100	72.409	Gallus_gallus
ENSIPUG00000009896	fubp1	100	83.159	ENSGAFG00000020972	fubp1	100	82.116	Gambusia_affinis
ENSIPUG00000009896	fubp1	100	78.915	ENSGACG00000016563	fubp1	100	77.364	Gasterosteus_aculeatus
ENSIPUG00000009896	fubp1	100	84.498	ENSHBUG00000009835	fubp1	100	84.043	Haplochromis_burtoni
ENSIPUG00000009896	fubp1	72	72.668	ENSHGLG00000002808	-	100	67.073	Heterocephalus_glaber_female
ENSIPUG00000009896	fubp1	70	76.840	ENSHGLG00000008415	-	100	80.255	Heterocephalus_glaber_female
ENSIPUG00000009896	fubp1	70	76.840	ENSHGLG00100003417	-	100	73.828	Heterocephalus_glaber_male
ENSIPUG00000009896	fubp1	72	73.753	ENSHGLG00100001414	-	100	67.378	Heterocephalus_glaber_male
ENSIPUG00000009896	fubp1	100	82.840	ENSHCOG00000000910	fubp1	100	80.769	Hippocampus_comes
ENSIPUG00000009896	fubp1	70	78.571	ENSSTOG00000014312	FUBP1	100	74.316	Ictidomys_tridecemlineatus
ENSIPUG00000009896	fubp1	70	78.125	ENSJJAG00000020069	Fubp1	100	78.912	Jaculus_jaculus
ENSIPUG00000009896	fubp1	100	83.560	ENSKMAG00000018897	fubp1	100	82.353	Kryptolebias_marmoratus
ENSIPUG00000009896	fubp1	99	81.157	ENSLBEG00000012700	fubp1	97	81.454	Labrus_bergylta
ENSIPUG00000009896	fubp1	98	83.333	ENSLOCG00000003745	fubp1	99	81.029	Lepisosteus_oculatus
ENSIPUG00000009896	fubp1	70	74.370	ENSLAFG00000003273	FUBP1	99	76.964	Loxodonta_africana
ENSIPUG00000009896	fubp1	70	77.632	ENSMFAG00000031825	FUBP1	100	74.125	Macaca_fascicularis
ENSIPUG00000009896	fubp1	70	78.348	ENSMMUG00000002899	FUBP1	100	74.164	Macaca_mulatta
ENSIPUG00000009896	fubp1	70	76.623	ENSMNEG00000045212	FUBP1	100	74.164	Macaca_nemestrina
ENSIPUG00000009896	fubp1	99	83.058	ENSMAMG00000007489	fubp1	99	82.309	Mastacembelus_armatus
ENSIPUG00000009896	fubp1	100	84.650	ENSMZEG00005024298	fubp1	100	84.195	Maylandia_zebra
ENSIPUG00000009896	fubp1	65	77.938	ENSMGAG00000009424	FUBP1	100	72.977	Meleagris_gallopavo
ENSIPUG00000009896	fubp1	70	77.056	ENSMAUG00000016428	Fubp1	98	79.592	Mesocricetus_auratus
ENSIPUG00000009896	fubp1	70	78.571	ENSMOCG00000014751	Fubp1	98	78.912	Microtus_ochrogaster
ENSIPUG00000009896	fubp1	86	84.249	ENSMMOG00000019463	fubp1	98	83.516	Mola_mola
ENSIPUG00000009896	fubp1	67	71.492	ENSMODG00000020804	FUBP1	100	69.136	Monodelphis_domestica
ENSIPUG00000009896	fubp1	100	83.612	ENSMALG00000015173	fubp1	100	83.156	Monopterus_albus
ENSIPUG00000009896	fubp1	70	78.540	MGP_CAROLIEiJ_G0025740	Fubp1	98	78.912	Mus_caroli
ENSIPUG00000009896	fubp1	70	78.319	ENSMUSG00000028034	Fubp1	98	78.231	Mus_musculus
ENSIPUG00000009896	fubp1	70	78.366	MGP_PahariEiJ_G0027191	Fubp1	98	78.912	Mus_pahari
ENSIPUG00000009896	fubp1	70	78.540	MGP_SPRETEiJ_G0026693	Fubp1	98	78.912	Mus_spretus
ENSIPUG00000009896	fubp1	70	73.597	ENSMLUG00000014802	FUBP1	100	71.053	Myotis_lucifugus
ENSIPUG00000009896	fubp1	70	74.398	ENSNGAG00000014302	Fubp1	98	78.912	Nannospalax_galili
ENSIPUG00000009896	fubp1	100	81.300	ENSNBRG00000015099	fubp1	100	79.239	Neolamprologus_brichardi
ENSIPUG00000009896	fubp1	70	74.728	ENSNLEG00000009772	FUBP1	100	71.710	Nomascus_leucogenys
ENSIPUG00000009896	fubp1	69	90.566	ENSOPRG00000001175	FUBP1	91	68.732	Ochotona_princeps
ENSIPUG00000009896	fubp1	70	76.840	ENSODEG00000002600	-	100	78.912	Octodon_degus
ENSIPUG00000009896	fubp1	99	54.589	ENSODEG00000003657	-	99	53.481	Octodon_degus
ENSIPUG00000009896	fubp1	99	84.451	ENSONIG00000018381	fubp1	99	82.965	Oreochromis_niloticus
ENSIPUG00000009896	fubp1	57	83.060	ENSOANG00000009777	FUBP1	99	73.301	Ornithorhynchus_anatinus
ENSIPUG00000009896	fubp1	99	79.173	ENSORLG00000003540	fubp1	99	77.901	Oryzias_latipes
ENSIPUG00000009896	fubp1	100	82.229	ENSORLG00020005908	fubp1	96	81.476	Oryzias_latipes_hni
ENSIPUG00000009896	fubp1	100	82.406	ENSORLG00015008779	fubp1	100	80.938	Oryzias_latipes_hsok
ENSIPUG00000009896	fubp1	100	82.353	ENSOMEG00000021943	fubp1	97	81.750	Oryzias_melastigma
ENSIPUG00000009896	fubp1	70	73.444	ENSOGAG00000014233	FUBP1	100	71.533	Otolemur_garnettii
ENSIPUG00000009896	fubp1	70	77.851	ENSOARG00000013259	FUBP1	100	75.111	Ovis_aries
ENSIPUG00000009896	fubp1	70	76.840	ENSPPRG00000000413	FUBP1	100	74.316	Panthera_pardus
ENSIPUG00000009896	fubp1	70	76.840	ENSPTIG00000019450	FUBP1	100	74.316	Panthera_tigris_altaica
ENSIPUG00000009896	fubp1	66	79.196	ENSPSIG00000012965	FUBP1	100	73.077	Pelodiscus_sinensis
ENSIPUG00000009896	fubp1	98	80.831	ENSPMGG00000009060	fubp1	98	77.831	Periophthalmus_magnuspinnatus
ENSIPUG00000009896	fubp1	70	77.681	ENSPEMG00000021802	Fubp1	100	78.231	Peromyscus_maniculatus_bairdii
ENSIPUG00000009896	fubp1	57	58.696	ENSPMAG00000001644	-	93	58.696	Petromyzon_marinus
ENSIPUG00000009896	fubp1	100	84.545	ENSPFOG00000000238	fubp1	100	83.485	Poecilia_formosa
ENSIPUG00000009896	fubp1	100	83.386	ENSPLAG00000021170	fubp1	100	81.171	Poecilia_latipinna
ENSIPUG00000009896	fubp1	99	81.675	ENSPMEG00000004747	fubp1	99	85.216	Poecilia_mexicana
ENSIPUG00000009896	fubp1	100	84.545	ENSPREG00000017911	fubp1	100	83.485	Poecilia_reticulata
ENSIPUG00000009896	fubp1	77	77.088	ENSPPYG00000001219	-	68	78.634	Pongo_abelii
ENSIPUG00000009896	fubp1	70	76.790	ENSPCAG00000012617	FUBP1	98	74.238	Procavia_capensis
ENSIPUG00000009896	fubp1	70	77.704	ENSPCOG00000024974	FUBP1	100	74.316	Propithecus_coquereli
ENSIPUG00000009896	fubp1	70	71.212	ENSPVAG00000014637	FUBP1	98	69.863	Pteropus_vampyrus
ENSIPUG00000009896	fubp1	100	84.650	ENSPNYG00000004552	fubp1	100	84.195	Pundamilia_nyererei
ENSIPUG00000009896	fubp1	100	88.839	ENSPNAG00000016207	fubp1	100	88.386	Pygocentrus_nattereri
ENSIPUG00000009896	fubp1	70	78.540	ENSRNOG00000043370	Fubp1	100	74.085	Rattus_norvegicus
ENSIPUG00000009896	fubp1	70	76.906	ENSRBIG00000042950	FUBP1	100	74.164	Rhinopithecus_bieti
ENSIPUG00000009896	fubp1	70	76.906	ENSRROG00000043534	FUBP1	100	74.164	Rhinopithecus_roxellana
ENSIPUG00000009896	fubp1	70	76.840	ENSSBOG00000027299	FUBP1	98	78.026	Saimiri_boliviensis_boliviensis
ENSIPUG00000009896	fubp1	65	78.147	ENSSHAG00000005367	FUBP1	99	77.477	Sarcophilus_harrisii
ENSIPUG00000009896	fubp1	100	86.474	ENSSFOG00015010213	fubp1	100	85.714	Scleropages_formosus
ENSIPUG00000009896	fubp1	100	78.667	ENSSMAG00000012029	fubp1	98	80.564	Scophthalmus_maximus
ENSIPUG00000009896	fubp1	100	83.159	ENSSDUG00000007383	fubp1	98	82.116	Seriola_dumerili
ENSIPUG00000009896	fubp1	100	83.159	ENSSLDG00000022863	fubp1	98	82.116	Seriola_lalandi_dorsalis
ENSIPUG00000009896	fubp1	83	88.298	ENSSARG00000011730	FUBP1	70	89.130	Sorex_araneus
ENSIPUG00000009896	fubp1	97	71.739	ENSSPUG00000008389	FUBP1	100	69.597	Sphenodon_punctatus
ENSIPUG00000009896	fubp1	100	84.370	ENSSPAG00000010161	fubp1	100	83.915	Stegastes_partitus
ENSIPUG00000009896	fubp1	65	79.147	ENSTGUG00000006841	FUBP1	100	72.786	Taeniopygia_guttata
ENSIPUG00000009896	fubp1	100	82.991	ENSTRUG00000004615	fubp1	100	79.179	Takifugu_rubripes
ENSIPUG00000009896	fubp1	50	90.845	ENSTNIG00000019815	-	87	89.796	Tetraodon_nigroviridis
ENSIPUG00000009896	fubp1	78	86.905	ENSTBEG00000017333	FUBP1	60	88.690	Tupaia_belangeri
ENSIPUG00000009896	fubp1	70	76.840	ENSTTRG00000000096	FUBP1	98	74.125	Tursiops_truncatus
ENSIPUG00000009896	fubp1	70	76.840	ENSVPAG00000004709	FUBP1	99	74.125	Vicugna_pacos
ENSIPUG00000009896	fubp1	100	78.336	ENSXCOG00000019354	fubp1	100	76.526	Xiphophorus_couchianus
ENSIPUG00000009896	fubp1	97	82.496	ENSXMAG00000007168	fubp1	99	85.050	Xiphophorus_maculatus