EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009957 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7713 bases
Position: chr20:8489774-8497486
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014603	zf-CCHC	PF00098.23	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015215	-	1869	-	ENSIPUP00000014603	622 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000009957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009957	-	97	86.268	ENSIPUG00000020583	-	91	86.743
ENSIPUG00000009957	-	97	87.942	ENSIPUG00000023478	-	95	88.436
ENSIPUG00000009957	-	97	81.745	ENSIPUG00000000467	-	86	82.160

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009957	-	52	34.309	ENSAPOG00000012172	-	68	34.309	Acanthochromis_polyacanthus
ENSIPUG00000009957	-	73	46.284	ENSACAG00000029367	-	62	46.284	Anolis_carolinensis
ENSIPUG00000009957	-	95	45.609	ENSAMXG00000036897	-	88	46.022	Astyanax_mexicanus
ENSIPUG00000009957	-	84	48.050	ENSAMXG00000038544	-	84	47.872	Astyanax_mexicanus
ENSIPUG00000009957	-	95	47.452	ENSAMXG00000043875	-	91	46.656	Astyanax_mexicanus
ENSIPUG00000009957	-	85	48.077	ENSAMXG00000030934	-	87	48.077	Astyanax_mexicanus
ENSIPUG00000009957	-	87	49.738	ENSAMXG00000029689	-	76	49.647	Astyanax_mexicanus
ENSIPUG00000009957	-	94	46.423	ENSAMXG00000033831	-	84	45.662	Astyanax_mexicanus
ENSIPUG00000009957	-	89	41.852	ENSKMAG00000021728	-	88	41.739	Kryptolebias_marmoratus
ENSIPUG00000009957	-	71	34.034	ENSORLG00000004601	-	60	33.613	Oryzias_latipes
ENSIPUG00000009957	-	91	39.052	ENSORLG00000025074	-	88	39.052	Oryzias_latipes
ENSIPUG00000009957	-	88	41.885	ENSORLG00000027546	-	81	41.873	Oryzias_latipes
ENSIPUG00000009957	-	92	38.134	ENSORLG00020019360	-	82	39.229	Oryzias_latipes_hni
ENSIPUG00000009957	-	87	39.161	ENSORLG00020008270	-	82	39.229	Oryzias_latipes_hni
ENSIPUG00000009957	-	88	39.249	ENSORLG00020018037	-	84	39.229	Oryzias_latipes_hni
ENSIPUG00000009957	-	91	42.593	ENSPKIG00000000452	-	92	42.593	Paramormyrops_kingsleyae
ENSIPUG00000009957	-	89	41.579	ENSPKIG00000021000	-	98	41.414	Paramormyrops_kingsleyae
ENSIPUG00000009957	-	93	46.321	ENSPNAG00000014076	-	92	46.633	Pygocentrus_nattereri
ENSIPUG00000009957	-	90	47.856	ENSPNAG00000003267	-	97	44.275	Pygocentrus_nattereri