EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010020 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1096 bases
Position: chr3:8549690-8550785
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014692	RRM_1	PF00076.22	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015307	-	531	-	ENSIPUP00000014692	176 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000010020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010020	-	61	50.000	ENSIPUG00000024435	-	85	50.000
ENSIPUG00000010020	-	66	50.758	ENSIPUG00000006780	-	64	50.758
ENSIPUG00000010020	-	66	50.758	ENSIPUG00000006760	-	66	50.758
ENSIPUG00000010020	-	63	69.600	ENSIPUG00000005537	-	96	69.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010020	-	70	57.246	ENSG00000070756	PABPC1	97	54.400	Homo_sapiens
ENSIPUG00000010020	-	91	48.315	ENSCHIG00000023714	PABPC1	87	48.315	Capra_hircus
ENSIPUG00000010020	-	70	51.449	ENSCANG00000036233	-	52	51.449	Colobus_angolensis_palliatus
ENSIPUG00000010020	-	70	57.246	ENSMUSG00000022283	Pabpc1	97	53.279	Mus_musculus
ENSIPUG00000010020	-	80	72.414	ENSNLEG00000034666	-	69	46.296	Nomascus_leucogenys
ENSIPUG00000010020	-	90	54.412	ENSSBOG00000021975	-	70	54.412	Saimiri_boliviensis_boliviensis
ENSIPUG00000010020	-	67	44.776	ENSSSCG00000033638	-	85	44.776	Sus_scrofa