EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010046 (Gene tree)
Gene ID: 100528293
Gene Symbol: sar1b
Alias: -
Full Name: SAR1 homolog B (S. cerevisiae)
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6239 bases
Position: chr13:9664624-9670862
Accession: 100528293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014845	MMR_HSR1	PF01926.23	2e-05	1	1
ENSIPUP00000014872	MMR_HSR1	PF01926.23	2e-05	1	1
ENSIPUP00000014893	MMR_HSR1	PF01926.23	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015517	-	426	-	ENSIPUP00000014893	141 (aa)	-	-
ENSIPUT00000015496	-	930	-	ENSIPUP00000014872	198 (aa)	-	E3TEH4
ENSIPUT00000015468	-	2285	-	ENSIPUP00000014845	198 (aa)	-	E3TEH4

Gene Model

Click here to download ENSIPUG00000010046's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010046	sar1b	92	31.694	ENSIPUG00000006913	-	66	31.694
ENSIPUG00000010046	sar1b	87	31.395	ENSIPUG00000004215	arf5	89	31.395
ENSIPUG00000010046	sar1b	66	35.484	ENSIPUG00000000108	Arf2	51	35.484
ENSIPUG00000010046	sar1b	93	30.159	ENSIPUG00000008227	arl3	96	30.159
ENSIPUG00000010046	sar1b	70	35.714	ENSIPUG00000006168	arl5b	55	35.714
ENSIPUG00000010046	sar1b	74	31.731	ENSIPUG00000023232	arl5c	57	31.731
ENSIPUG00000010046	sar1b	96	31.937	ENSIPUG00000019792	arl3l1	96	31.937
ENSIPUG00000010046	sar1b	100	85.859	ENSIPUG00000024669	SAR1B	100	85.859
ENSIPUG00000010046	sar1b	74	35.514	ENSIPUG00000024239	ARL6	86	32.258
ENSIPUG00000010046	sar1b	88	31.818	ENSIPUG00000020426	arl11	92	31.818
ENSIPUG00000010046	sar1b	74	34.615	ENSIPUG00000011737	arf1	57	34.615
ENSIPUG00000010046	sar1b	88	31.285	ENSIPUG00000000931	arl8ba	65	32.515
ENSIPUG00000010046	sar1b	74	34.615	ENSIPUG00000007829	arf3a	57	34.615
ENSIPUG00000010046	sar1b	74	36.697	ENSIPUG00000002122	arl4cb	75	33.557
ENSIPUG00000010046	sar1b	97	30.412	ENSIPUG00000013834	arl1	96	30.412
ENSIPUG00000010046	sar1b	67	39.394	ENSIPUG00000024159	arl4a	69	35.766
ENSIPUG00000010046	sar1b	66	35.294	ENSIPUG00000019342	Arl4d	68	35.294
ENSIPUG00000010046	sar1b	74	36.364	ENSIPUG00000021618	arl4ab	75	34.899
ENSIPUG00000010046	sar1b	74	33.113	ENSIPUG00000021761	arl8bb	81	33.113
ENSIPUG00000010046	sar1b	66	35.484	ENSIPUG00000007016	arf4	52	35.484
ENSIPUG00000010046	sar1b	87	30.814	ENSIPUG00000004159	Arf5	89	30.814
ENSIPUG00000010046	sar1b	74	39.091	ENSIPUG00000006298	-	67	37.313
ENSIPUG00000010046	sar1b	82	33.043	ENSIPUG00000006311	arf1	59	33.043
ENSIPUG00000010046	sar1b	92	32.240	ENSIPUG00000003931	arl2	93	32.240
ENSIPUG00000010046	sar1b	65	41.053	ENSIPUG00000020344	-	81	36.090
ENSIPUG00000010046	sar1b	87	30.233	ENSIPUG00000015451	arl3	92	30.233
ENSIPUG00000010046	sar1b	100	86.869	ENSIPUG00000020925	sar1b	100	86.869
ENSIPUG00000010046	sar1b	74	34.615	ENSIPUG00000023431	arf3b	57	34.615
ENSIPUG00000010046	sar1b	63	31.461	ENSIPUG00000021388	arl5a	53	31.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010046	sar1b	100	89.394	ENSAPOG00000017891	-	100	89.394	Acanthochromis_polyacanthus
ENSIPUG00000010046	sar1b	100	85.354	ENSAPOG00000007186	sar1b	100	85.354	Acanthochromis_polyacanthus
ENSIPUG00000010046	sar1b	100	85.859	ENSACIG00000013634	sar1b	100	85.859	Amphilophus_citrinellus
ENSIPUG00000010046	sar1b	100	87.879	ENSACIG00000024513	-	100	87.879	Amphilophus_citrinellus
ENSIPUG00000010046	sar1b	100	84.848	ENSAOCG00000005888	sar1b	100	84.848	Amphiprion_ocellaris
ENSIPUG00000010046	sar1b	100	89.394	ENSAOCG00000002627	-	100	89.394	Amphiprion_ocellaris
ENSIPUG00000010046	sar1b	100	84.848	ENSAPEG00000022771	sar1b	100	84.848	Amphiprion_percula
ENSIPUG00000010046	sar1b	100	89.394	ENSAPEG00000019680	-	100	89.394	Amphiprion_percula
ENSIPUG00000010046	sar1b	100	85.354	ENSATEG00000012904	sar1b	100	85.354	Anabas_testudineus
ENSIPUG00000010046	sar1b	100	86.869	ENSATEG00000023368	-	100	86.869	Anabas_testudineus
ENSIPUG00000010046	sar1b	100	87.374	ENSACAG00000001470	-	100	87.374	Anolis_carolinensis
ENSIPUG00000010046	sar1b	100	86.364	ENSACLG00000014649	sar1b	100	86.364	Astatotilapia_calliptera
ENSIPUG00000010046	sar1b	100	88.384	ENSACLG00000005011	-	100	88.384	Astatotilapia_calliptera
ENSIPUG00000010046	sar1b	91	84.091	ENSAMXG00000018108	sar1b	95	84.091	Astyanax_mexicanus
ENSIPUG00000010046	sar1b	100	92.424	ENSAMXG00000034192	-	91	92.424	Astyanax_mexicanus
ENSIPUG00000010046	sar1b	100	78.818	ENSCSEG00000015238	sar1b	100	78.818	Cynoglossus_semilaevis
ENSIPUG00000010046	sar1b	100	86.869	ENSCSEG00000016976	-	100	86.869	Cynoglossus_semilaevis
ENSIPUG00000010046	sar1b	100	88.889	ENSCVAG00000022959	sar1b	100	88.889	Cyprinodon_variegatus
ENSIPUG00000010046	sar1b	100	87.374	ENSDARG00000103403	sar1b	100	87.374	Danio_rerio
ENSIPUG00000010046	sar1b	99	71.939	FBgn0038947	Sar1	99	71.939	Drosophila_melanogaster
ENSIPUG00000010046	sar1b	97	82.292	ENSEBUG00000011723	sar1b	97	82.292	Eptatretus_burgeri
ENSIPUG00000010046	sar1b	100	88.889	ENSELUG00000020912	sar1b	100	88.889	Esox_lucius
ENSIPUG00000010046	sar1b	100	87.374	ENSFHEG00000019865	sar1b	100	87.374	Fundulus_heteroclitus
ENSIPUG00000010046	sar1b	100	88.889	ENSGMOG00000008023	sar1b	100	88.889	Gadus_morhua
ENSIPUG00000010046	sar1b	100	86.869	ENSGAFG00000007081	sar1b	100	86.869	Gambusia_affinis
ENSIPUG00000010046	sar1b	100	85.354	ENSGACG00000001474	sar1b	100	85.354	Gasterosteus_aculeatus
ENSIPUG00000010046	sar1b	100	88.384	ENSHBUG00000018397	-	100	88.384	Haplochromis_burtoni
ENSIPUG00000010046	sar1b	100	86.364	ENSHBUG00000000915	sar1b	100	86.364	Haplochromis_burtoni
ENSIPUG00000010046	sar1b	100	85.859	ENSHCOG00000010953	sar1b	100	85.859	Hippocampus_comes
ENSIPUG00000010046	sar1b	100	86.364	ENSKMAG00000019693	sar1b	100	86.364	Kryptolebias_marmoratus
ENSIPUG00000010046	sar1b	100	87.374	ENSKMAG00000014875	-	100	87.374	Kryptolebias_marmoratus
ENSIPUG00000010046	sar1b	100	83.838	ENSLBEG00000027550	sar1b	100	83.838	Labrus_bergylta
ENSIPUG00000010046	sar1b	100	89.394	ENSLBEG00000016945	-	100	89.394	Labrus_bergylta
ENSIPUG00000010046	sar1b	100	68.844	ENSLACG00000017029	-	100	68.844	Latimeria_chalumnae
ENSIPUG00000010046	sar1b	100	83.838	ENSLACG00000010795	sar1b	100	83.838	Latimeria_chalumnae
ENSIPUG00000010046	sar1b	100	90.909	ENSLOCG00000005214	-	100	90.909	Lepisosteus_oculatus
ENSIPUG00000010046	sar1b	100	89.394	ENSLOCG00000010197	sar1b	100	89.394	Lepisosteus_oculatus
ENSIPUG00000010046	sar1b	100	84.848	ENSMAMG00000021732	sar1b	100	84.848	Mastacembelus_armatus
ENSIPUG00000010046	sar1b	100	88.384	ENSMZEG00005001012	-	100	88.384	Maylandia_zebra
ENSIPUG00000010046	sar1b	100	86.364	ENSMZEG00005008942	sar1b	100	86.364	Maylandia_zebra
ENSIPUG00000010046	sar1b	90	88.268	ENSMGAG00000005387	-	91	88.268	Meleagris_gallopavo
ENSIPUG00000010046	sar1b	100	88.889	ENSMMOG00000013803	-	100	88.889	Mola_mola
ENSIPUG00000010046	sar1b	100	86.869	ENSMALG00000016635	sar1b	97	85.714	Monopterus_albus
ENSIPUG00000010046	sar1b	100	85.859	ENSNBRG00000008013	sar1b	100	85.859	Neolamprologus_brichardi
ENSIPUG00000010046	sar1b	100	88.889	ENSNBRG00000014004	-	100	88.889	Neolamprologus_brichardi
ENSIPUG00000010046	sar1b	100	85.354	ENSONIG00000017278	sar1b	100	85.354	Oreochromis_niloticus
ENSIPUG00000010046	sar1b	100	84.848	ENSORLG00000000932	sar1b	100	84.848	Oryzias_latipes
ENSIPUG00000010046	sar1b	100	84.848	ENSORLG00020021985	sar1b	100	84.848	Oryzias_latipes_hni
ENSIPUG00000010046	sar1b	100	84.848	ENSORLG00015007044	sar1b	100	84.848	Oryzias_latipes_hsok
ENSIPUG00000010046	sar1b	100	85.354	ENSOMEG00000001052	sar1b	100	85.354	Oryzias_melastigma
ENSIPUG00000010046	sar1b	100	87.374	ENSPKIG00000017353	-	100	87.374	Paramormyrops_kingsleyae
ENSIPUG00000010046	sar1b	100	87.374	ENSPKIG00000010688	sar1b	100	87.374	Paramormyrops_kingsleyae
ENSIPUG00000010046	sar1b	82	91.379	ENSPMGG00000001234	sar1b	91	91.379	Periophthalmus_magnuspinnatus
ENSIPUG00000010046	sar1b	100	80.100	ENSPMAG00000003593	sar1b	100	80.100	Petromyzon_marinus
ENSIPUG00000010046	sar1b	100	86.869	ENSPFOG00000005666	sar1b	100	86.869	Poecilia_formosa
ENSIPUG00000010046	sar1b	84	88.235	ENSPLAG00000001016	-	77	88.235	Poecilia_latipinna
ENSIPUG00000010046	sar1b	100	86.364	ENSPLAG00000012223	sar1b	100	86.364	Poecilia_latipinna
ENSIPUG00000010046	sar1b	100	86.869	ENSPMEG00000016831	sar1b	100	86.869	Poecilia_mexicana
ENSIPUG00000010046	sar1b	94	80.303	ENSPREG00000002020	-	95	80.303	Poecilia_reticulata
ENSIPUG00000010046	sar1b	100	86.869	ENSPREG00000005312	sar1b	90	86.869	Poecilia_reticulata
ENSIPUG00000010046	sar1b	100	86.364	ENSPNYG00000012440	sar1b	100	86.364	Pundamilia_nyererei
ENSIPUG00000010046	sar1b	100	88.889	ENSPNYG00000021357	-	100	88.889	Pundamilia_nyererei
ENSIPUG00000010046	sar1b	100	92.424	ENSPNAG00000001123	-	100	92.424	Pygocentrus_nattereri
ENSIPUG00000010046	sar1b	100	87.879	ENSPNAG00000014683	sar1b	100	87.879	Pygocentrus_nattereri
ENSIPUG00000010046	sar1b	100	89.899	ENSSFOG00015020051	sar1b	100	89.899	Scleropages_formosus
ENSIPUG00000010046	sar1b	100	88.384	ENSSFOG00015018128	-	100	88.384	Scleropages_formosus
ENSIPUG00000010046	sar1b	100	84.343	ENSSMAG00000007106	sar1b	80	84.343	Scophthalmus_maximus
ENSIPUG00000010046	sar1b	100	86.869	ENSSMAG00000002165	-	100	86.869	Scophthalmus_maximus
ENSIPUG00000010046	sar1b	100	88.384	ENSSDUG00000019629	-	100	88.384	Seriola_dumerili
ENSIPUG00000010046	sar1b	100	85.354	ENSSDUG00000020926	sar1b	98	87.603	Seriola_dumerili
ENSIPUG00000010046	sar1b	100	88.384	ENSSLDG00000024197	-	100	88.384	Seriola_lalandi_dorsalis
ENSIPUG00000010046	sar1b	100	85.354	ENSSLDG00000017052	sar1b	94	91.667	Seriola_lalandi_dorsalis
ENSIPUG00000010046	sar1b	100	86.364	ENSSPUG00000010247	-	100	86.364	Sphenodon_punctatus
ENSIPUG00000010046	sar1b	100	88.384	ENSSPAG00000015626	-	100	88.384	Stegastes_partitus
ENSIPUG00000010046	sar1b	100	85.859	ENSSPAG00000017634	sar1b	100	85.859	Stegastes_partitus
ENSIPUG00000010046	sar1b	100	82.323	ENSTRUG00000023908	sar1b	100	82.323	Takifugu_rubripes
ENSIPUG00000010046	sar1b	100	83.838	ENSTNIG00000016097	sar1b	100	83.838	Tetraodon_nigroviridis
ENSIPUG00000010046	sar1b	87	84.677	ENSXCOG00000006154	-	83	84.677	Xiphophorus_couchianus
ENSIPUG00000010046	sar1b	90	87.640	ENSXCOG00000004160	sar1b	87	87.640	Xiphophorus_couchianus
ENSIPUG00000010046	sar1b	100	86.869	ENSXMAG00000008294	sar1b	100	86.869	Xiphophorus_maculatus