EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010071 (Gene tree)
Gene ID: 108271917
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7730 bases
Position: chr11:10214318-10222047
Accession: 108271917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014790	zf-C2H2	PF00096.26	7.6e-26	1	6
ENSIPUP00000014790	zf-C2H2	PF00096.26	7.6e-26	2	6
ENSIPUP00000014790	zf-C2H2	PF00096.26	7.6e-26	3	6
ENSIPUP00000014790	zf-C2H2	PF00096.26	7.6e-26	4	6
ENSIPUP00000014790	zf-C2H2	PF00096.26	7.6e-26	5	6
ENSIPUP00000014790	zf-C2H2	PF00096.26	7.6e-26	6	6
ENSIPUP00000014790	zf-met	PF12874.7	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015410	-	2045	XM_017479875	ENSIPUP00000014790	443 (aa)	XP_017335364	A0A2D0RXZ1

Gene Model

Click here to download ENSIPUG00000010071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010071	gfi1ab	87	61.404	ENSIPUG00000013414	GFI1	100	61.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010071	gfi1ab	87	62.118	ENSG00000162676	GFI1	100	62.588	Homo_sapiens
ENSIPUG00000010071	gfi1ab	87	66.412	ENSAPOG00000015189	gfi1ab	100	66.499	Acanthochromis_polyacanthus
ENSIPUG00000010071	gfi1ab	87	65.316	ENSACIG00000016354	gfi1ab	100	66.667	Amphilophus_citrinellus
ENSIPUG00000010071	gfi1ab	87	44.048	ENSAOCG00000008339	gfi1ab	100	46.324	Amphiprion_ocellaris
ENSIPUG00000010071	gfi1ab	87	66.412	ENSAPEG00000023870	gfi1ab	100	66.499	Amphiprion_percula
ENSIPUG00000010071	gfi1ab	87	63.980	ENSATEG00000009167	gfi1ab	89	62.879	Anabas_testudineus
ENSIPUG00000010071	gfi1ab	73	65.882	ENSAPLG00000015700	GFI1	97	65.882	Anas_platyrhynchos
ENSIPUG00000010071	gfi1ab	87	64.444	ENSACAG00000004498	GFI1	100	64.444	Anolis_carolinensis
ENSIPUG00000010071	gfi1ab	87	61.557	ENSANAG00000019656	GFI1	100	62.118	Aotus_nancymaae
ENSIPUG00000010071	gfi1ab	87	66.244	ENSACLG00000026458	gfi1ab	93	65.990	Astatotilapia_calliptera
ENSIPUG00000010071	gfi1ab	87	73.048	ENSAMXG00000039600	gfi1ab	100	72.796	Astyanax_mexicanus
ENSIPUG00000010071	gfi1ab	71	71.053	ENSAMXG00000006669	GFI1	100	50.649	Astyanax_mexicanus
ENSIPUG00000010071	gfi1ab	87	61.772	ENSBTAG00000016723	GFI1	100	62.175	Bos_taurus
ENSIPUG00000010071	gfi1ab	87	61.882	ENSCJAG00000017609	GFI1	100	61.882	Callithrix_jacchus
ENSIPUG00000010071	gfi1ab	87	62.264	ENSCAFG00000020155	GFI1	100	62.500	Canis_familiaris
ENSIPUG00000010071	gfi1ab	95	58.420	ENSCAFG00020013371	GFI1	99	58.910	Canis_lupus_dingo
ENSIPUG00000010071	gfi1ab	87	61.305	ENSCHIG00000016135	GFI1	100	61.702	Capra_hircus
ENSIPUG00000010071	gfi1ab	87	61.682	ENSCPOG00000011727	GFI1	100	62.322	Cavia_porcellus
ENSIPUG00000010071	gfi1ab	87	61.882	ENSCCAG00000036072	GFI1	100	61.792	Cebus_capucinus
ENSIPUG00000010071	gfi1ab	87	62.118	ENSCATG00000037873	GFI1	100	62.588	Cercocebus_atys
ENSIPUG00000010071	gfi1ab	87	65.000	ENSCLAG00000005915	GFI1	100	59.633	Chinchilla_lanigera
ENSIPUG00000010071	gfi1ab	85	56.403	ENSCSAG00000001469	GFI1	100	56.948	Chlorocebus_sabaeus
ENSIPUG00000010071	gfi1ab	87	61.412	ENSCANG00000034077	GFI1	100	61.882	Colobus_angolensis_palliatus
ENSIPUG00000010071	gfi1ab	87	61.163	ENSCGRG00001015432	Gfi1	100	62.028	Cricetulus_griseus_chok1gshd
ENSIPUG00000010071	gfi1ab	87	61.809	ENSCSEG00000017729	GFI1	100	61.809	Cynoglossus_semilaevis
ENSIPUG00000010071	gfi1ab	87	58.911	ENSCVAG00000004930	GFI1	100	59.506	Cyprinodon_variegatus
ENSIPUG00000010071	gfi1ab	87	65.500	ENSCVAG00000011828	gfi1ab	100	64.662	Cyprinodon_variegatus
ENSIPUG00000010071	gfi1ab	87	73.300	ENSDARG00000044457	gfi1ab	100	73.300	Danio_rerio
ENSIPUG00000010071	gfi1ab	87	61.021	ENSDNOG00000000782	GFI1	97	62.588	Dasypus_novemcinctus
ENSIPUG00000010071	gfi1ab	87	62.708	ENSEASG00005015509	GFI1	86	62.796	Equus_asinus_asinus
ENSIPUG00000010071	gfi1ab	85	58.242	ENSECAG00000006647	GFI1	86	58.242	Equus_caballus
ENSIPUG00000010071	gfi1ab	87	59.811	ENSEEUG00000000198	GFI1	100	60.047	Erinaceus_europaeus
ENSIPUG00000010071	gfi1ab	87	68.922	ENSELUG00000003015	gfi1ab	99	68.672	Esox_lucius
ENSIPUG00000010071	gfi1ab	87	60.902	ENSELUG00000019033	GFI1	100	60.902	Esox_lucius
ENSIPUG00000010071	gfi1ab	87	61.395	ENSFCAG00000005914	GFI1	100	62.264	Felis_catus
ENSIPUG00000010071	gfi1ab	87	61.463	ENSFHEG00000000341	GFI1	100	61.707	Fundulus_heteroclitus
ENSIPUG00000010071	gfi1ab	87	65.250	ENSFHEG00000010997	gfi1ab	100	63.659	Fundulus_heteroclitus
ENSIPUG00000010071	gfi1ab	87	66.412	ENSGMOG00000007737	gfi1ab	100	66.412	Gadus_morhua
ENSIPUG00000010071	gfi1ab	87	64.548	ENSGALG00000043650	GFI1	100	64.548	Gallus_gallus
ENSIPUG00000010071	gfi1ab	87	59.806	ENSGAFG00000018063	GFI1	100	60.341	Gambusia_affinis
ENSIPUG00000010071	gfi1ab	87	65.491	ENSGAFG00000016637	gfi1ab	100	65.239	Gambusia_affinis
ENSIPUG00000010071	gfi1ab	87	66.835	ENSGACG00000004257	gfi1ab	97	66.835	Gasterosteus_aculeatus
ENSIPUG00000010071	gfi1ab	87	62.118	ENSGGOG00000005320	GFI1	100	62.588	Gorilla_gorilla
ENSIPUG00000010071	gfi1ab	87	67.179	ENSHBUG00000011969	gfi1ab	100	66.923	Haplochromis_burtoni
ENSIPUG00000010071	gfi1ab	87	61.449	ENSHGLG00000008020	GFI1	100	61.611	Heterocephalus_glaber_female
ENSIPUG00000010071	gfi1ab	87	61.449	ENSHGLG00100000610	GFI1	100	61.611	Heterocephalus_glaber_male
ENSIPUG00000010071	gfi1ab	87	57.213	ENSHCOG00000008590	gfi1ab	100	57.213	Hippocampus_comes
ENSIPUG00000010071	gfi1ab	87	58.718	ENSHCOG00000019555	GFI1	100	59.744	Hippocampus_comes
ENSIPUG00000010071	gfi1ab	87	62.676	ENSSTOG00000014583	GFI1	100	62.824	Ictidomys_tridecemlineatus
ENSIPUG00000010071	gfi1ab	87	65.482	ENSKMAG00000003810	gfi1ab	100	65.228	Kryptolebias_marmoratus
ENSIPUG00000010071	gfi1ab	87	65.995	ENSLBEG00000027776	gfi1ab	100	66.000	Labrus_bergylta
ENSIPUG00000010071	gfi1ab	86	46.373	ENSLACG00000017590	-	99	46.373	Latimeria_chalumnae
ENSIPUG00000010071	gfi1ab	87	66.833	ENSLACG00000013362	GFI1	98	66.833	Latimeria_chalumnae
ENSIPUG00000010071	gfi1ab	87	68.090	ENSLOCG00000004711	gfi1ab	100	68.090	Lepisosteus_oculatus
ENSIPUG00000010071	gfi1ab	87	62.410	ENSLAFG00000018346	GFI1	100	62.651	Loxodonta_africana
ENSIPUG00000010071	gfi1ab	87	62.118	ENSMFAG00000045801	GFI1	100	62.588	Macaca_fascicularis
ENSIPUG00000010071	gfi1ab	87	62.118	ENSMNEG00000036338	GFI1	100	62.588	Macaca_nemestrina
ENSIPUG00000010071	gfi1ab	87	62.118	ENSMLEG00000036181	GFI1	100	62.588	Mandrillus_leucophaeus
ENSIPUG00000010071	gfi1ab	87	67.857	ENSMAMG00000008125	gfi1ab	100	67.684	Mastacembelus_armatus
ENSIPUG00000010071	gfi1ab	87	66.158	ENSMZEG00005009895	gfi1ab	100	65.903	Maylandia_zebra
ENSIPUG00000010071	gfi1ab	73	67.552	ENSMGAG00000008187	GFI1	97	67.552	Meleagris_gallopavo
ENSIPUG00000010071	gfi1ab	87	61.163	ENSMICG00000047208	GFI1	100	62.028	Microcebus_murinus
ENSIPUG00000010071	gfi1ab	87	65.394	ENSMMOG00000005556	gfi1ab	100	65.140	Mola_mola
ENSIPUG00000010071	gfi1ab	87	61.432	ENSMODG00000011802	GFI1	100	62.150	Monodelphis_domestica
ENSIPUG00000010071	gfi1ab	87	65.063	ENSMALG00000014672	gfi1ab	100	64.810	Monopterus_albus
ENSIPUG00000010071	gfi1ab	87	60.698	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSIPUG00000010071	gfi1ab	87	60.829	ENSMUSG00000029275	Gfi1	100	61.215	Mus_musculus
ENSIPUG00000010071	gfi1ab	87	60.185	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSIPUG00000010071	gfi1ab	87	60.599	MGP_SPRETEiJ_G0028507	Gfi1	100	61.215	Mus_spretus
ENSIPUG00000010071	gfi1ab	87	65.736	ENSMPUG00000004178	GFI1	97	65.736	Mustela_putorius_furo
ENSIPUG00000010071	gfi1ab	88	60.550	ENSMLUG00000015191	GFI1	99	61.163	Myotis_lucifugus
ENSIPUG00000010071	gfi1ab	87	65.578	ENSNBRG00000015774	gfi1ab	100	65.414	Neolamprologus_brichardi
ENSIPUG00000010071	gfi1ab	79	61.240	ENSNLEG00000010470	GFI1	96	61.240	Nomascus_leucogenys
ENSIPUG00000010071	gfi1ab	87	62.207	ENSOPRG00000001473	GFI1	100	61.882	Ochotona_princeps
ENSIPUG00000010071	gfi1ab	87	66.667	ENSONIG00000019246	gfi1ab	100	66.412	Oreochromis_niloticus
ENSIPUG00000010071	gfi1ab	85	56.065	ENSOCUG00000023553	GFI1	93	55.200	Oryctolagus_cuniculus
ENSIPUG00000010071	gfi1ab	87	64.322	ENSORLG00000013806	gfi1ab	100	62.972	Oryzias_latipes
ENSIPUG00000010071	gfi1ab	87	61.421	ENSORLG00000005060	GFI1	100	61.616	Oryzias_latipes
ENSIPUG00000010071	gfi1ab	87	65.561	ENSORLG00020001602	gfi1ab	100	64.706	Oryzias_latipes_hni
ENSIPUG00000010071	gfi1ab	87	56.888	ENSORLG00020002817	GFI1	100	55.844	Oryzias_latipes_hni
ENSIPUG00000010071	gfi1ab	87	60.406	ENSORLG00015006070	GFI1	100	61.364	Oryzias_latipes_hsok
ENSIPUG00000010071	gfi1ab	87	61.965	ENSOMEG00000016722	GFI1	100	61.965	Oryzias_melastigma
ENSIPUG00000010071	gfi1ab	87	63.939	ENSOGAG00000027913	GFI1	100	63.939	Otolemur_garnettii
ENSIPUG00000010071	gfi1ab	85	52.266	ENSOARG00000016329	GFI1	94	55.015	Ovis_aries
ENSIPUG00000010071	gfi1ab	87	65.051	ENSPPAG00000042186	GFI1	100	65.051	Pan_paniscus
ENSIPUG00000010071	gfi1ab	87	61.395	ENSPPRG00000007521	GFI1	100	62.264	Panthera_pardus
ENSIPUG00000010071	gfi1ab	87	61.882	ENSPTRG00000043053	GFI1	100	62.353	Pan_troglodytes
ENSIPUG00000010071	gfi1ab	87	62.118	ENSPANG00000016433	GFI1	100	62.588	Papio_anubis
ENSIPUG00000010071	gfi1ab	87	70.647	ENSPKIG00000004263	GFI1	100	70.398	Paramormyrops_kingsleyae
ENSIPUG00000010071	gfi1ab	71	69.184	ENSPSIG00000008734	GFI1	92	69.184	Pelodiscus_sinensis
ENSIPUG00000010071	gfi1ab	87	65.051	ENSPMGG00000012546	gfi1ab	100	65.051	Periophthalmus_magnuspinnatus
ENSIPUG00000010071	gfi1ab	87	62.676	ENSPCIG00000013728	GFI1	100	63.895	Phascolarctos_cinereus
ENSIPUG00000010071	gfi1ab	87	65.163	ENSPFOG00000023214	gfi1ab	100	64.912	Poecilia_formosa
ENSIPUG00000010071	gfi1ab	88	61.098	ENSPLAG00000005376	GFI1	96	59.954	Poecilia_latipinna
ENSIPUG00000010071	gfi1ab	87	65.163	ENSPLAG00000010879	gfi1ab	100	87.500	Poecilia_latipinna
ENSIPUG00000010071	gfi1ab	87	65.414	ENSPMEG00000013694	gfi1ab	100	65.163	Poecilia_mexicana
ENSIPUG00000010071	gfi1ab	87	61.707	ENSPMEG00000019299	GFI1	100	62.010	Poecilia_mexicana
ENSIPUG00000010071	gfi1ab	87	64.532	ENSPREG00000014097	gfi1ab	100	64.286	Poecilia_reticulata
ENSIPUG00000010071	gfi1ab	87	54.805	ENSPREG00000007997	GFI1	100	54.545	Poecilia_reticulata
ENSIPUG00000010071	gfi1ab	87	51.756	ENSPCAG00000011020	GFI1	100	51.756	Procavia_capensis
ENSIPUG00000010071	gfi1ab	87	61.395	ENSPCOG00000020540	GFI1	100	62.264	Propithecus_coquereli
ENSIPUG00000010071	gfi1ab	87	62.353	ENSPVAG00000006928	GFI1	100	63.246	Pteropus_vampyrus
ENSIPUG00000010071	gfi1ab	87	66.412	ENSPNYG00000021183	gfi1ab	100	66.158	Pundamilia_nyererei
ENSIPUG00000010071	gfi1ab	87	74.684	ENSPNAG00000027258	gfi1ab	100	74.430	Pygocentrus_nattereri
ENSIPUG00000010071	gfi1ab	87	58.333	ENSPNAG00000028014	GFI1	100	59.690	Pygocentrus_nattereri
ENSIPUG00000010071	gfi1ab	87	61.163	ENSRNOG00000002042	Gfi1	100	61.321	Rattus_norvegicus
ENSIPUG00000010071	gfi1ab	87	62.118	ENSRBIG00000036467	GFI1	100	62.353	Rhinopithecus_bieti
ENSIPUG00000010071	gfi1ab	87	62.118	ENSRROG00000031687	GFI1	100	62.353	Rhinopithecus_roxellana
ENSIPUG00000010071	gfi1ab	87	61.253	ENSSBOG00000031300	GFI1	100	62.118	Saimiri_boliviensis_boliviensis
ENSIPUG00000010071	gfi1ab	86	63.095	ENSSFOG00015008114	-	52	63.095	Scleropages_formosus
ENSIPUG00000010071	gfi1ab	87	69.095	ENSSFOG00015020295	gfi1	100	68.844	Scleropages_formosus
ENSIPUG00000010071	gfi1ab	87	66.499	ENSSMAG00000002782	gfi1ab	100	66.247	Scophthalmus_maximus
ENSIPUG00000010071	gfi1ab	87	64.646	ENSSDUG00000022410	gfi1ab	100	64.646	Seriola_dumerili
ENSIPUG00000010071	gfi1ab	87	64.646	ENSSLDG00000020163	gfi1ab	100	64.721	Seriola_lalandi_dorsalis
ENSIPUG00000010071	gfi1ab	68	93.750	ENSSPAG00000009140	gfi1ab	99	93.750	Stegastes_partitus
ENSIPUG00000010071	gfi1ab	87	63.059	ENSSSCG00000006902	GFI1	100	63.484	Sus_scrofa
ENSIPUG00000010071	gfi1ab	71	69.486	ENSTGUG00000006060	GFI1	95	69.486	Taeniopygia_guttata
ENSIPUG00000010071	gfi1ab	87	66.076	ENSTRUG00000000415	gfi1ab	100	65.823	Takifugu_rubripes
ENSIPUG00000010071	gfi1ab	87	63.496	ENSTNIG00000000651	gfi1ab	97	63.613	Tetraodon_nigroviridis
ENSIPUG00000010071	gfi1ab	87	61.538	ENSTTRG00000000082	GFI1	100	61.702	Tursiops_truncatus
ENSIPUG00000010071	gfi1ab	87	63.285	ENSUAMG00000021124	GFI1	91	63.725	Ursus_americanus
ENSIPUG00000010071	gfi1ab	87	63.198	ENSXETG00000023006	gfi1	98	63.198	Xenopus_tropicalis
ENSIPUG00000010071	gfi1ab	74	52.113	ENSXMAG00000009274	GFI1	70	54.085	Xiphophorus_maculatus
ENSIPUG00000010071	gfi1ab	87	64.286	ENSXMAG00000010523	gfi1ab	100	64.039	Xiphophorus_maculatus