EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000010131 (Gene tree)
Gene ID
108270806
Gene Symbol
RBMS1
Alias
fe16a10|rbms1|wu:fe16a10
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
25641 bases
Position
chr10:23955178-23980818
Accession
108270806
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000014941RRM_1PF00076.222.4e-3312
ENSIPUP00000014941RRM_1PF00076.222.4e-3322
ENSIPUP00000014956RRM_1PF00076.222.5e-3312
ENSIPUP00000014956RRM_1PF00076.222.5e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000015568-1188XM_017477739ENSIPUP00000014941395 (aa)XP_017333228W5UB40
ENSIPUT00000015583-1197-ENSIPUP00000014956398 (aa)--
Gene Model
Click here to download ENSIPUG00000010131's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010131's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000010131RBMS18170.213ENSIPUG00000017680rbms37870.213
ENSIPUG00000010131RBMS15236.323ENSIPUG00000001381elavl46536.923
ENSIPUG00000010131RBMS15735.565ENSIPUG00000012337elavl26336.923
ENSIPUG00000010131RBMS19365.867ENSIPUG00000001757rbms2a8767.139
ENSIPUG00000010131RBMS18669.388ENSIPUG00000021323RBMS29366.667
ENSIPUG00000010131RBMS19976.515ENSIPUG00000014677RBMS110076.010
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000010131RBMS18874.716ENSG00000153250RBMS18389.623Homo_sapiens
ENSIPUG00000010131RBMS19974.747ENSAPOG00000024437-10074.747Acanthochromis_polyacanthus
ENSIPUG00000010131RBMS19863.590ENSAPOG00000013761rbms1a9861.795Acanthochromis_polyacanthus
ENSIPUG00000010131RBMS18873.034ENSAMEG00000012661RBMS19273.034Ailuropoda_melanoleuca
ENSIPUG00000010131RBMS18874.713ENSACIG00000021498RBMS18874.713Amphilophus_citrinellus
ENSIPUG00000010131RBMS18762.139ENSACIG00000000113rbms1a9061.561Amphilophus_citrinellus
ENSIPUG00000010131RBMS19972.727ENSAOCG00000014482-10074.242Amphiprion_ocellaris
ENSIPUG00000010131RBMS19863.590ENSAOCG00000010066rbms1a9863.333Amphiprion_ocellaris
ENSIPUG00000010131RBMS19972.727ENSAPEG00000018371-10074.242Amphiprion_percula
ENSIPUG00000010131RBMS19863.590ENSAPEG00000023563rbms1a9863.590Amphiprion_percula
ENSIPUG00000010131RBMS19862.916ENSATEG00000015450rbms1a9862.660Anabas_testudineus
ENSIPUG00000010131RBMS19971.717ENSATEG00000018573RBMS110071.212Anabas_testudineus
ENSIPUG00000010131RBMS18874.432ENSAPLG00000007282RBMS18874.432Anas_platyrhynchos
ENSIPUG00000010131RBMS19774.680ENSACAG00000011984RBMS18273.618Anolis_carolinensis
ENSIPUG00000010131RBMS18073.602ENSANAG00000024424RBMS110073.602Aotus_nancymaae
ENSIPUG00000010131RBMS19971.465ENSACLG00000013048RBMS110072.727Astatotilapia_calliptera
ENSIPUG00000010131RBMS19862.564ENSACLG00000021512rbms1a9862.564Astatotilapia_calliptera
ENSIPUG00000010131RBMS19976.768ENSAMXG00000009969RBMS110076.768Astyanax_mexicanus
ENSIPUG00000010131RBMS110092.443ENSAMXG00000002146rbms1a10092.443Astyanax_mexicanus
ENSIPUG00000010131RBMS19772.634ENSBTAG00000005180RBMS110072.167Bos_taurus
ENSIPUG00000010131RBMS19768.380ENSCJAG00000022465-9969.923Callithrix_jacchus
ENSIPUG00000010131RBMS18875.000ENSCJAG00000014861-8974.148Callithrix_jacchus
ENSIPUG00000010131RBMS19771.208ENSCJAG00000012871-9871.465Callithrix_jacchus
ENSIPUG00000010131RBMS19772.379ENSCAFG00000009922RBMS110071.921Canis_familiaris
ENSIPUG00000010131RBMS19768.796ENSCAFG00020006120RBMS110068.483Canis_lupus_dingo
ENSIPUG00000010131RBMS18873.864ENSCHIG00000023380RBMS18773.864Capra_hircus
ENSIPUG00000010131RBMS18874.716ENSTSYG00000005584RBMS19473.864Carlito_syrichta
ENSIPUG00000010131RBMS18874.432ENSCPOG00000012310RBMS19370.380Cavia_porcellus
ENSIPUG00000010131RBMS18875.000ENSCCAG00000033841RBMS19175.000Cebus_capucinus
ENSIPUG00000010131RBMS18874.716ENSCATG00000043032RBMS19473.864Cercocebus_atys
ENSIPUG00000010131RBMS18874.148ENSCLAG00000003031RBMS19570.109Chinchilla_lanigera
ENSIPUG00000010131RBMS18874.716ENSCSAG00000015687RBMS18774.716Chlorocebus_sabaeus
ENSIPUG00000010131RBMS19972.525ENSCPBG00000026455RBMS110073.515Chrysemys_picta_bellii
ENSIPUG00000010131RBMS18874.716ENSCANG00000042152RBMS19473.864Colobus_angolensis_palliatus
ENSIPUG00000010131RBMS19967.299ENSCGRG00001022833Rbms110068.246Cricetulus_griseus_chok1gshd
ENSIPUG00000010131RBMS18873.580ENSCGRG00000008824Rbms19370.380Cricetulus_griseus_crigri
ENSIPUG00000010131RBMS19861.893ENSCSEG00000000889rbms1a9861.637Cynoglossus_semilaevis
ENSIPUG00000010131RBMS19973.300ENSCSEG00000010652RBMS110071.788Cynoglossus_semilaevis
ENSIPUG00000010131RBMS19763.753ENSCVAG00000014698rbms1a9863.496Cyprinodon_variegatus
ENSIPUG00000010131RBMS19972.727ENSCVAG00000002027RBMS110072.475Cyprinodon_variegatus
ENSIPUG00000010131RBMS110089.474ENSDARG00000074023rbms1a10089.474Danio_rerio
ENSIPUG00000010131RBMS18871.467ENSDNOG00000040691RBMS19571.467Dasypus_novemcinctus
ENSIPUG00000010131RBMS18874.432ENSDORG00000007103Rbms19570.380Dipodomys_ordii
ENSIPUG00000010131RBMS18866.193ENSETEG00000012135RBMS19266.193Echinops_telfairi
ENSIPUG00000010131RBMS19772.634ENSEASG00005023132RBMS110072.167Equus_asinus_asinus
ENSIPUG00000010131RBMS19769.042ENSECAG00000019894RBMS110068.720Equus_caballus
ENSIPUG00000010131RBMS16693.878ENSEEUG00000005628RBMS16693.878Erinaceus_europaeus
ENSIPUG00000010131RBMS19665.000ENSELUG00000019328RBMS19466.579Esox_lucius
ENSIPUG00000010131RBMS19866.240ENSELUG00000018923rbms1a9865.816Esox_lucius
ENSIPUG00000010131RBMS18873.864ENSFCAG00000012524RBMS19473.011Felis_catus
ENSIPUG00000010131RBMS18874.148ENSFALG00000004440RBMS19474.148Ficedula_albicollis
ENSIPUG00000010131RBMS18874.432ENSFDAG00000015692RBMS19370.380Fukomys_damarensis
ENSIPUG00000010131RBMS19970.960ENSFHEG00000000720RBMS110071.970Fundulus_heteroclitus
ENSIPUG00000010131RBMS19763.496ENSFHEG00000005662rbms1a9770.732Fundulus_heteroclitus
ENSIPUG00000010131RBMS18063.444ENSGMOG00000000525rbms1a9861.473Gadus_morhua
ENSIPUG00000010131RBMS19772.308ENSGALG00000011132RBMS110071.782Gallus_gallus
ENSIPUG00000010131RBMS18666.374ENSGAFG00000011633rbms1a9466.276Gambusia_affinis
ENSIPUG00000010131RBMS19971.717ENSGAFG00000007708RBMS110074.495Gambusia_affinis
ENSIPUG00000010131RBMS19061.333ENSGACG00000015174rbms1a9067.913Gasterosteus_aculeatus
ENSIPUG00000010131RBMS19972.222ENSGACG00000005671RBMS110072.475Gasterosteus_aculeatus
ENSIPUG00000010131RBMS19973.267ENSGAGG00000007866RBMS110073.515Gopherus_agassizii
ENSIPUG00000010131RBMS19771.208ENSGGOG00000043756-10070.443Gorilla_gorilla
ENSIPUG00000010131RBMS18874.716ENSGGOG00000001264RBMS19473.864Gorilla_gorilla
ENSIPUG00000010131RBMS19862.564ENSHBUG00000004802rbms1a9862.564Haplochromis_burtoni
ENSIPUG00000010131RBMS19474.263ENSHBUG00000004516RBMS19872.032Haplochromis_burtoni
ENSIPUG00000010131RBMS18874.148ENSHGLG00000010387RBMS18974.148Heterocephalus_glaber_female
ENSIPUG00000010131RBMS18874.148ENSHGLG00100014105RBMS19370.109Heterocephalus_glaber_male
ENSIPUG00000010131RBMS19763.990ENSHCOG00000020097rbms1a9863.731Hippocampus_comes
ENSIPUG00000010131RBMS19969.949ENSHCOG00000016668RBMS110071.212Hippocampus_comes
ENSIPUG00000010131RBMS18874.432ENSSTOG00000012501RBMS19370.380Ictidomys_tridecemlineatus
ENSIPUG00000010131RBMS18873.011ENSJJAG00000016543Rbms19569.837Jaculus_jaculus
ENSIPUG00000010131RBMS19763.239ENSKMAG00000011839-9862.982Kryptolebias_marmoratus
ENSIPUG00000010131RBMS19971.465ENSKMAG00000013911RBMS110072.727Kryptolebias_marmoratus
ENSIPUG00000010131RBMS19863.333ENSLBEG00000025962rbms1a9863.077Labrus_bergylta
ENSIPUG00000010131RBMS19972.222ENSLBEG00000005787RBMS110073.737Labrus_bergylta
ENSIPUG00000010131RBMS19973.697ENSLACG00000004324RBMS19973.697Latimeria_chalumnae
ENSIPUG00000010131RBMS19977.778ENSLOCG00000008622rbms1a10079.798Lepisosteus_oculatus
ENSIPUG00000010131RBMS18873.295ENSLAFG00000017217RBMS19273.295Loxodonta_africana
ENSIPUG00000010131RBMS18874.716ENSMFAG00000000274RBMS19473.864Macaca_fascicularis
ENSIPUG00000010131RBMS19769.042ENSMMUG00000016825RBMS110068.720Macaca_mulatta
ENSIPUG00000010131RBMS18874.716ENSMNEG00000039425RBMS19473.864Macaca_nemestrina
ENSIPUG00000010131RBMS18874.432ENSMLEG00000031517RBMS19473.580Mandrillus_leucophaeus
ENSIPUG00000010131RBMS19861.381ENSMAMG00000005018rbms1a9859.591Mastacembelus_armatus
ENSIPUG00000010131RBMS19970.707ENSMAMG00000003159-10071.465Mastacembelus_armatus
ENSIPUG00000010131RBMS19862.564ENSMZEG00005005661rbms1a9862.564Maylandia_zebra
ENSIPUG00000010131RBMS18276.000ENSMZEG00005007313RBMS19176.000Maylandia_zebra
ENSIPUG00000010131RBMS18875.000ENSMGAG00000011054RBMS110073.556Meleagris_gallopavo
ENSIPUG00000010131RBMS19769.042ENSMAUG00000008550Rbms19670.025Mesocricetus_auratus
ENSIPUG00000010131RBMS18874.148ENSMICG00000008325RBMS19274.148Microcebus_murinus
ENSIPUG00000010131RBMS19868.049ENSMOCG00000022617Rbms19769.024Microtus_ochrogaster
ENSIPUG00000010131RBMS19861.082ENSMMOG00000018249rbms1a9861.340Mola_mola
ENSIPUG00000010131RBMS19972.727ENSMMOG00000003707RBMS110074.242Mola_mola
ENSIPUG00000010131RBMS18874.432ENSMODG00000005250RBMS18774.432Monodelphis_domestica
ENSIPUG00000010131RBMS19862.660ENSMALG00000014235rbms1a9862.404Monopterus_albus
ENSIPUG00000010131RBMS19672.368ENSMALG00000015715-9972.519Monopterus_albus
ENSIPUG00000010131RBMS19868.049MGP_CAROLIEiJ_G0023586Rbms19769.024Mus_caroli
ENSIPUG00000010131RBMS19868.537ENSMUSG00000026970Rbms19769.512Mus_musculus
ENSIPUG00000010131RBMS19870.812MGP_PahariEiJ_G0025037Rbms19771.827Mus_pahari
ENSIPUG00000010131RBMS19868.293MGP_SPRETEiJ_G0024508Rbms19769.268Mus_spretus
ENSIPUG00000010131RBMS18870.652ENSMPUG00000000539RBMS18770.652Mustela_putorius_furo
ENSIPUG00000010131RBMS18869.730ENSMLUG00000008762RBMS18869.730Myotis_lucifugus
ENSIPUG00000010131RBMS19868.049ENSNGAG00000013636Rbms19769.024Nannospalax_galili
ENSIPUG00000010131RBMS18868.966ENSNBRG00000015151RBMS19468.966Neolamprologus_brichardi
ENSIPUG00000010131RBMS18764.928ENSNBRG00000020217rbms1a9464.928Neolamprologus_brichardi
ENSIPUG00000010131RBMS18874.716ENSNLEG00000001667RBMS19473.864Nomascus_leucogenys
ENSIPUG00000010131RBMS18063.665ENSMEUG00000000746RBMS110063.665Notamacropus_eugenii
ENSIPUG00000010131RBMS18868.466ENSOPRG00000012431RBMS18768.466Ochotona_princeps
ENSIPUG00000010131RBMS18873.295ENSODEG00000013934RBMS19570.109Octodon_degus
ENSIPUG00000010131RBMS19971.970ENSONIG00000008934RBMS110073.485Oreochromis_niloticus
ENSIPUG00000010131RBMS19862.821ENSONIG00000003329rbms1a9863.333Oreochromis_niloticus
ENSIPUG00000010131RBMS15449.383ENSOANG00000004477-9949.174Ornithorhynchus_anatinus
ENSIPUG00000010131RBMS18875.284ENSOANG00000006166RBMS18975.284Ornithorhynchus_anatinus
ENSIPUG00000010131RBMS18873.011ENSOCUG00000017365RBMS18273.011Oryctolagus_cuniculus
ENSIPUG00000010131RBMS19861.282ENSORLG00000003917rbms1a9861.026Oryzias_latipes
ENSIPUG00000010131RBMS19667.454ENSORLG00000016818RBMS19967.506Oryzias_latipes
ENSIPUG00000010131RBMS19667.454ENSORLG00020022335RBMS19967.506Oryzias_latipes_hni
ENSIPUG00000010131RBMS19861.282ENSORLG00020018663rbms1a9861.026Oryzias_latipes_hni
ENSIPUG00000010131RBMS19861.282ENSORLG00015016556rbms1a9861.026Oryzias_latipes_hsok
ENSIPUG00000010131RBMS19667.979ENSORLG00015018208RBMS19968.010Oryzias_latipes_hsok
ENSIPUG00000010131RBMS19669.737ENSOMEG00000002394RBMS19970.455Oryzias_melastigma
ENSIPUG00000010131RBMS18874.011ENSOGAG00000002900RBMS19474.011Otolemur_garnettii
ENSIPUG00000010131RBMS18873.864ENSOARG00000006870RBMS19570.270Ovis_aries
ENSIPUG00000010131RBMS18874.716ENSPPAG00000040083RBMS19274.716Pan_paniscus
ENSIPUG00000010131RBMS18872.727ENSPPAG00000036520-9272.727Pan_paniscus
ENSIPUG00000010131RBMS18873.864ENSPPRG00000005040RBMS19473.011Panthera_pardus
ENSIPUG00000010131RBMS18873.864ENSPTIG00000021240RBMS19473.011Panthera_tigris_altaica
ENSIPUG00000010131RBMS18874.716ENSPTRG00000052304RBMS19274.716Pan_troglodytes
ENSIPUG00000010131RBMS18873.295ENSPTRG00000039358-9968.116Pan_troglodytes
ENSIPUG00000010131RBMS18874.716ENSPANG00000001383RBMS19274.716Papio_anubis
ENSIPUG00000010131RBMS19975.063ENSPKIG00000001498rbms1a10075.063Paramormyrops_kingsleyae
ENSIPUG00000010131RBMS19974.495ENSPKIG00000012818rbms1a10073.232Paramormyrops_kingsleyae
ENSIPUG00000010131RBMS18874.148ENSPSIG00000010240RBMS18774.148Pelodiscus_sinensis
ENSIPUG00000010131RBMS19861.340ENSPMGG00000004341rbms1a9860.309Periophthalmus_magnuspinnatus
ENSIPUG00000010131RBMS18274.383ENSPMGG00000006310RBMS19566.474Periophthalmus_magnuspinnatus
ENSIPUG00000010131RBMS19868.293ENSPEMG00000009449Rbms19769.268Peromyscus_maniculatus_bairdii
ENSIPUG00000010131RBMS19971.182ENSPCIG00000018405RBMS110071.921Phascolarctos_cinereus
ENSIPUG00000010131RBMS19763.753ENSPFOG00000016116rbms1a9863.496Poecilia_formosa
ENSIPUG00000010131RBMS19972.980ENSPFOG00000017483RBMS110075.000Poecilia_formosa
ENSIPUG00000010131RBMS19763.753ENSPLAG00000013864rbms1a9863.496Poecilia_latipinna
ENSIPUG00000010131RBMS19972.222ENSPLAG00000000920RBMS110075.000Poecilia_latipinna
ENSIPUG00000010131RBMS19972.980ENSPMEG00000015838RBMS110075.000Poecilia_mexicana
ENSIPUG00000010131RBMS19763.753ENSPMEG00000016185rbms1a9863.496Poecilia_mexicana
ENSIPUG00000010131RBMS19973.232ENSPREG00000008146RBMS110075.253Poecilia_reticulata
ENSIPUG00000010131RBMS19763.753ENSPREG00000020161rbms1a9863.496Poecilia_reticulata
ENSIPUG00000010131RBMS18871.196ENSPPYG00000012879-8771.196Pongo_abelii
ENSIPUG00000010131RBMS18870.170ENSPCAG00000009673RBMS18770.170Procavia_capensis
ENSIPUG00000010131RBMS18874.432ENSPCOG00000027294RBMS19473.580Propithecus_coquereli
ENSIPUG00000010131RBMS17385.276ENSPVAG00000010429RBMS17185.276Pteropus_vampyrus
ENSIPUG00000010131RBMS19971.717ENSPNYG00000002643RBMS110069.652Pundamilia_nyererei
ENSIPUG00000010131RBMS19695.013ENSPNAG00000010225rbms1a9795.013Pygocentrus_nattereri
ENSIPUG00000010131RBMS19976.768ENSPNAG00000023479RBMS110076.768Pygocentrus_nattereri
ENSIPUG00000010131RBMS18872.727ENSRNOG00000008482Rbms19169.565Rattus_norvegicus
ENSIPUG00000010131RBMS19968.720ENSRBIG00000044262RBMS110069.668Rhinopithecus_bieti
ENSIPUG00000010131RBMS19968.483ENSRROG00000043108RBMS110069.431Rhinopithecus_roxellana
ENSIPUG00000010131RBMS18875.000ENSSBOG00000034705RBMS19475.000Saimiri_boliviensis_boliviensis
ENSIPUG00000010131RBMS18874.148ENSSHAG00000012271RBMS110068.696Sarcophilus_harrisii
ENSIPUG00000010131RBMS18876.657ENSSFOG00015014493rbms1a9576.657Scleropages_formosus
ENSIPUG00000010131RBMS19975.827ENSSFOG00015022929rbms19977.354Scleropages_formosus
ENSIPUG00000010131RBMS18665.698ENSSMAG00000012722rbms1a9465.598Scophthalmus_maximus
ENSIPUG00000010131RBMS19971.970ENSSMAG00000012152RBMS19574.510Scophthalmus_maximus
ENSIPUG00000010131RBMS19972.727ENSSDUG00000018803RBMS110074.242Seriola_dumerili
ENSIPUG00000010131RBMS19862.916ENSSDUG00000020602rbms1a9862.660Seriola_dumerili
ENSIPUG00000010131RBMS19862.916ENSSLDG00000009495rbms1a9862.660Seriola_lalandi_dorsalis
ENSIPUG00000010131RBMS19972.980ENSSLDG00000016556RBMS110074.495Seriola_lalandi_dorsalis
ENSIPUG00000010131RBMS18367.623ENSSARG00000011085RBMS17173.232Sorex_araneus
ENSIPUG00000010131RBMS18875.000ENSSPUG00000017163RBMS19475.000Sphenodon_punctatus
ENSIPUG00000010131RBMS19974.242ENSSPAG00000000059RBMS110075.758Stegastes_partitus
ENSIPUG00000010131RBMS19863.333ENSSPAG00000005371rbms1a9861.538Stegastes_partitus
ENSIPUG00000010131RBMS19770.332ENSSSCG00000015888RBMS110068.932Sus_scrofa
ENSIPUG00000010131RBMS18874.148ENSTGUG00000006606RBMS18774.148Taeniopygia_guttata
ENSIPUG00000010131RBMS19970.529ENSTRUG00000005466-10072.292Takifugu_rubripes
ENSIPUG00000010131RBMS19862.087ENSTRUG00000017155rbms1a9860.305Takifugu_rubripes
ENSIPUG00000010131RBMS18962.817ENSTNIG00000009477rbms1a9863.009Tetraodon_nigroviridis
ENSIPUG00000010131RBMS19470.856ENSTNIG00000016496RBMS19773.276Tetraodon_nigroviridis
ENSIPUG00000010131RBMS18866.477ENSTBEG00000016156RBMS19266.477Tupaia_belangeri
ENSIPUG00000010131RBMS18874.148ENSTTRG00000011058RBMS19274.148Tursiops_truncatus
ENSIPUG00000010131RBMS18873.580ENSUAMG00000022331RBMS18773.580Ursus_americanus
ENSIPUG00000010131RBMS18873.580ENSUMAG00000008605RBMS19073.580Ursus_maritimus
ENSIPUG00000010131RBMS18276.758ENSVPAG00000002716RBMS18676.758Vicugna_pacos
ENSIPUG00000010131RBMS18873.580ENSVVUG00000018682RBMS19473.580Vulpes_vulpes
ENSIPUG00000010131RBMS19668.052ENSXETG00000016204rbms110068.052Xenopus_tropicalis
ENSIPUG00000010131RBMS18766.087ENSXCOG00000001659rbms1a9165.797Xiphophorus_couchianus
ENSIPUG00000010131RBMS18873.563ENSXCOG00000000211RBMS19573.563Xiphophorus_couchianus
ENSIPUG00000010131RBMS19763.496ENSXMAG00000001802rbms1a9863.239Xiphophorus_maculatus
ENSIPUG00000010131RBMS19972.222ENSXMAG00000011405RBMS110074.242Xiphophorus_maculatus

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