EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010187 (Gene tree)
Gene ID: 108264325
Gene Symbol: larp6
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4249 bases
Position: chr4:30163114-30167362
Accession: 108264325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014949	La	PF05383.17	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015576	-	1944	XM_017465756	ENSIPUP00000014949	647 (aa)	XP_017321245	A0A2D0QUT4

Gene Model

Click here to download ENSIPUG00000010187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010187	larp6	66	39.865	ENSIPUG00000007609	larp6b	90	38.652
ENSIPUG00000010187	larp6	67	38.128	ENSIPUG00000002828	-	98	37.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010187	larp6	65	60.277	ENSG00000166173	LARP6	85	59.039	Homo_sapiens
ENSIPUG00000010187	larp6	100	66.006	ENSAPOG00000021773	larp6a	100	64.773	Acanthochromis_polyacanthus
ENSIPUG00000010187	larp6	65	59.815	ENSAMEG00000008897	LARP6	99	58.876	Ailuropoda_melanoleuca
ENSIPUG00000010187	larp6	74	79.637	ENSACIG00000005166	larp6a	96	78.384	Amphilophus_citrinellus
ENSIPUG00000010187	larp6	100	65.957	ENSAOCG00000002284	larp6a	100	64.957	Amphiprion_ocellaris
ENSIPUG00000010187	larp6	78	76.236	ENSAPEG00000008077	larp6a	100	75.285	Amphiprion_percula
ENSIPUG00000010187	larp6	100	64.336	ENSATEG00000004018	larp6a	100	63.675	Anabas_testudineus
ENSIPUG00000010187	larp6	65	59.447	ENSAPLG00000009914	LARP6	98	59.217	Anas_platyrhynchos
ENSIPUG00000010187	larp6	65	59.584	ENSACAG00000008613	LARP6	97	60.465	Anolis_carolinensis
ENSIPUG00000010187	larp6	65	60.277	ENSANAG00000024860	LARP6	85	59.268	Aotus_nancymaae
ENSIPUG00000010187	larp6	100	64.739	ENSACLG00000018561	larp6a	97	63.842	Astatotilapia_calliptera
ENSIPUG00000010187	larp6	68	38.462	ENSAMXG00000036816	-	93	39.907	Astyanax_mexicanus
ENSIPUG00000010187	larp6	73	83.669	ENSAMXG00000029387	larp6a	100	69.174	Astyanax_mexicanus
ENSIPUG00000010187	larp6	65	60.046	ENSBTAG00000003915	LARP6	85	59.404	Bos_taurus
ENSIPUG00000010187	larp6	65	59.908	ENSCJAG00000018642	-	85	59.039	Callithrix_jacchus
ENSIPUG00000010187	larp6	71	56.033	ENSCJAG00000046236	-	85	58.810	Callithrix_jacchus
ENSIPUG00000010187	larp6	65	60.185	ENSCAFG00000017616	LARP6	99	58.784	Canis_familiaris
ENSIPUG00000010187	larp6	65	60.185	ENSCAFG00020007296	LARP6	86	58.784	Canis_lupus_dingo
ENSIPUG00000010187	larp6	65	60.046	ENSCHIG00000013742	LARP6	85	59.404	Capra_hircus
ENSIPUG00000010187	larp6	65	59.722	ENSTSYG00000028124	LARP6	86	58.559	Carlito_syrichta
ENSIPUG00000010187	larp6	65	58.237	ENSCAPG00000015452	LARP6	97	58.565	Cavia_aperea
ENSIPUG00000010187	larp6	70	54.733	ENSCPOG00000022687	LARP6	84	58.565	Cavia_porcellus
ENSIPUG00000010187	larp6	65	60.046	ENSCCAG00000036320	LARP6	85	59.039	Cebus_capucinus
ENSIPUG00000010187	larp6	65	60.046	ENSCATG00000042432	LARP6	85	58.352	Cercocebus_atys
ENSIPUG00000010187	larp6	65	59.122	ENSCLAG00000007893	LARP6	86	58.202	Chinchilla_lanigera
ENSIPUG00000010187	larp6	65	60.277	ENSCSAG00000013672	LARP6	85	59.039	Chlorocebus_sabaeus
ENSIPUG00000010187	larp6	65	59.122	ENSCHOG00000003318	LARP6	87	58.352	Choloepus_hoffmanni
ENSIPUG00000010187	larp6	67	60.497	ENSCPBG00000010771	LARP6	82	60.045	Chrysemys_picta_bellii
ENSIPUG00000010187	larp6	65	60.185	ENSCANG00000025833	LARP6	98	59.080	Colobus_angolensis_palliatus
ENSIPUG00000010187	larp6	65	59.815	ENSCGRG00001024472	Larp6	85	60.092	Cricetulus_griseus_chok1gshd
ENSIPUG00000010187	larp6	65	59.815	ENSCGRG00000004527	Larp6	85	60.092	Cricetulus_griseus_crigri
ENSIPUG00000010187	larp6	78	75.332	ENSCSEG00000011196	larp6a	77	74.573	Cynoglossus_semilaevis
ENSIPUG00000010187	larp6	100	65.945	ENSCVAG00000009605	larp6a	100	64.841	Cyprinodon_variegatus
ENSIPUG00000010187	larp6	74	80.567	ENSDARG00000005355	larp6a	99	83.827	Danio_rerio
ENSIPUG00000010187	larp6	67	58.014	ENSDNOG00000042993	LARP6	87	57.271	Dasypus_novemcinctus
ENSIPUG00000010187	larp6	71	53.830	ENSDORG00000023910	Larp6	95	55.123	Dipodomys_ordii
ENSIPUG00000010187	larp6	65	60.739	ENSEASG00005005490	LARP6	62	59.725	Equus_asinus_asinus
ENSIPUG00000010187	larp6	67	59.910	ENSECAG00000014190	LARP6	93	59.142	Equus_caballus
ENSIPUG00000010187	larp6	100	66.239	ENSELUG00000007341	larp6a	100	65.297	Esox_lucius
ENSIPUG00000010187	larp6	65	59.815	ENSFCAG00000001361	LARP6	86	57.978	Felis_catus
ENSIPUG00000010187	larp6	66	59.453	ENSFALG00000012389	LARP6	91	58.482	Ficedula_albicollis
ENSIPUG00000010187	larp6	65	58.891	ENSFDAG00000019994	LARP6	83	58.427	Fukomys_damarensis
ENSIPUG00000010187	larp6	100	65.211	ENSFHEG00000010312	larp6a	100	63.662	Fundulus_heteroclitus
ENSIPUG00000010187	larp6	65	60.599	ENSGALG00000004046	LARP6	84	60.138	Gallus_gallus
ENSIPUG00000010187	larp6	100	65.341	ENSGAFG00000009426	larp6a	100	64.205	Gambusia_affinis
ENSIPUG00000010187	larp6	67	81.179	ENSGACG00000014622	larp6a	99	80.272	Gasterosteus_aculeatus
ENSIPUG00000010187	larp6	62	57.702	ENSGAGG00000010802	LARP6	58	57.213	Gopherus_agassizii
ENSIPUG00000010187	larp6	65	60.185	ENSGGOG00000024151	LARP6	98	59.080	Gorilla_gorilla
ENSIPUG00000010187	larp6	100	65.162	ENSHBUG00000021014	larp6a	97	63.842	Haplochromis_burtoni
ENSIPUG00000010187	larp6	67	59.459	ENSHGLG00000015112	LARP6	88	58.553	Heterocephalus_glaber_female
ENSIPUG00000010187	larp6	65	60.185	ENSHGLG00100013159	LARP6	98	59.633	Heterocephalus_glaber_male
ENSIPUG00000010187	larp6	74	76.735	ENSHCOG00000001241	larp6a	93	76.531	Hippocampus_comes
ENSIPUG00000010187	larp6	65	60.046	ENSSTOG00000024279	LARP6	90	59.039	Ictidomys_tridecemlineatus
ENSIPUG00000010187	larp6	65	60.325	ENSJJAG00000011013	Larp6	96	55.738	Jaculus_jaculus
ENSIPUG00000010187	larp6	82	78.715	ENSKMAG00000001702	larp6a	100	61.404	Kryptolebias_marmoratus
ENSIPUG00000010187	larp6	74	75.605	ENSLBEG00000000170	larp6a	94	74.395	Labrus_bergylta
ENSIPUG00000010187	larp6	64	43.155	ENSLACG00000002786	-	95	44.651	Latimeria_chalumnae
ENSIPUG00000010187	larp6	73	62.757	ENSLACG00000018706	LARP6	91	61.934	Latimeria_chalumnae
ENSIPUG00000010187	larp6	64	42.191	ENSLOCG00000008547	-	80	45.349	Lepisosteus_oculatus
ENSIPUG00000010187	larp6	100	63.610	ENSLOCG00000014592	larp6a	100	63.545	Lepisosteus_oculatus
ENSIPUG00000010187	larp6	65	60.606	ENSLAFG00000016343	LARP6	92	59.815	Loxodonta_africana
ENSIPUG00000010187	larp6	65	60.277	ENSMFAG00000035507	LARP6	93	59.039	Macaca_fascicularis
ENSIPUG00000010187	larp6	65	60.277	ENSMMUG00000004429	LARP6	87	59.039	Macaca_mulatta
ENSIPUG00000010187	larp6	65	60.277	ENSMNEG00000045335	LARP6	85	59.039	Macaca_nemestrina
ENSIPUG00000010187	larp6	65	60.185	ENSMLEG00000038587	LARP6	98	59.080	Mandrillus_leucophaeus
ENSIPUG00000010187	larp6	100	64.797	ENSMAMG00000005261	larp6a	100	64.525	Mastacembelus_armatus
ENSIPUG00000010187	larp6	100	65.303	ENSMZEG00005005774	larp6a	97	63.983	Maylandia_zebra
ENSIPUG00000010187	larp6	65	61.663	ENSMGAG00000005077	LARP6	98	61.432	Meleagris_gallopavo
ENSIPUG00000010187	larp6	65	60.508	ENSMAUG00000018486	Larp6	85	59.815	Mesocricetus_auratus
ENSIPUG00000010187	larp6	65	59.815	ENSMICG00000011234	LARP6	85	59.174	Microcebus_murinus
ENSIPUG00000010187	larp6	65	60.277	ENSMOCG00000010492	Larp6	85	59.862	Microtus_ochrogaster
ENSIPUG00000010187	larp6	77	77.451	ENSMMOG00000016284	larp6a	98	75.686	Mola_mola
ENSIPUG00000010187	larp6	67	56.152	ENSMODG00000009034	LARP6	83	55.506	Monodelphis_domestica
ENSIPUG00000010187	larp6	76	75.292	ENSMALG00000014439	larp6a	97	73.930	Monopterus_albus
ENSIPUG00000010187	larp6	65	60.277	MGP_CAROLIEiJ_G0032314	Larp6	86	59.326	Mus_caroli
ENSIPUG00000010187	larp6	65	60.046	ENSMUSG00000034839	Larp6	86	59.101	Mus_musculus
ENSIPUG00000010187	larp6	65	59.353	MGP_PahariEiJ_G0015180	Larp6	86	58.427	Mus_pahari
ENSIPUG00000010187	larp6	65	60.277	MGP_SPRETEiJ_G0033452	Larp6	86	59.326	Mus_spretus
ENSIPUG00000010187	larp6	65	59.815	ENSMPUG00000017086	LARP6	99	58.876	Mustela_putorius_furo
ENSIPUG00000010187	larp6	65	59.677	ENSMLUG00000010319	LARP6	85	59.361	Myotis_lucifugus
ENSIPUG00000010187	larp6	65	60.557	ENSNGAG00000014238	Larp6	84	59.540	Nannospalax_galili
ENSIPUG00000010187	larp6	74	79.032	ENSNBRG00000008120	larp6a	94	77.980	Neolamprologus_brichardi
ENSIPUG00000010187	larp6	65	60.277	ENSNLEG00000013691	LARP6	85	59.174	Nomascus_leucogenys
ENSIPUG00000010187	larp6	55	64.706	ENSMEUG00000002270	LARP6	72	65.574	Notamacropus_eugenii
ENSIPUG00000010187	larp6	55	54.865	ENSOPRG00000004868	-	99	55.676	Ochotona_princeps
ENSIPUG00000010187	larp6	65	59.294	ENSODEG00000015958	LARP6	85	57.044	Octodon_degus
ENSIPUG00000010187	larp6	74	78.916	ENSONIG00000002901	larp6a	94	77.867	Oreochromis_niloticus
ENSIPUG00000010187	larp6	63	59.124	ENSOCUG00000009306	LARP6	97	59.485	Oryctolagus_cuniculus
ENSIPUG00000010187	larp6	73	77.526	ENSORLG00000014256	larp6a	94	76.082	Oryzias_latipes
ENSIPUG00000010187	larp6	100	64.470	ENSORLG00020019657	larp6a	100	63.173	Oryzias_latipes_hni
ENSIPUG00000010187	larp6	100	65.106	ENSORLG00015017915	larp6a	100	64.183	Oryzias_latipes_hsok
ENSIPUG00000010187	larp6	100	66.379	ENSOMEG00000017049	larp6a	100	64.791	Oryzias_melastigma
ENSIPUG00000010187	larp6	64	60.287	ENSOGAG00000000522	LARP6	84	59.404	Otolemur_garnettii
ENSIPUG00000010187	larp6	65	59.815	ENSOARG00000018750	LARP6	96	59.174	Ovis_aries
ENSIPUG00000010187	larp6	65	60.185	ENSPPAG00000031247	LARP6	98	59.080	Pan_paniscus
ENSIPUG00000010187	larp6	65	59.584	ENSPPRG00000011282	LARP6	86	57.753	Panthera_pardus
ENSIPUG00000010187	larp6	65	59.491	ENSPTIG00000015318	LARP6	86	58.108	Panthera_tigris_altaica
ENSIPUG00000010187	larp6	65	60.277	ENSPTRG00000007234	LARP6	85	59.039	Pan_troglodytes
ENSIPUG00000010187	larp6	65	60.277	ENSPANG00000016362	LARP6	85	59.039	Papio_anubis
ENSIPUG00000010187	larp6	100	60.311	ENSPKIG00000020103	larp6a	94	70.495	Paramormyrops_kingsleyae
ENSIPUG00000010187	larp6	74	75.000	ENSPKIG00000004511	LARP6	100	60.637	Paramormyrops_kingsleyae
ENSIPUG00000010187	larp6	74	79.630	ENSPMGG00000006958	larp6a	96	78.807	Periophthalmus_magnuspinnatus
ENSIPUG00000010187	larp6	71	55.761	ENSPEMG00000012909	Larp6	85	59.404	Peromyscus_maniculatus_bairdii
ENSIPUG00000010187	larp6	65	57.631	ENSPCIG00000020765	LARP6	98	51.894	Phascolarctos_cinereus
ENSIPUG00000010187	larp6	74	77.912	ENSPFOG00000014175	larp6a	94	77.465	Poecilia_formosa
ENSIPUG00000010187	larp6	100	64.516	ENSPLAG00000011105	larp6a	100	63.394	Poecilia_latipinna
ENSIPUG00000010187	larp6	100	64.557	ENSPMEG00000011085	larp6a	100	63.432	Poecilia_mexicana
ENSIPUG00000010187	larp6	100	64.124	ENSPREG00000008067	larp6a	100	63.136	Poecilia_reticulata
ENSIPUG00000010187	larp6	65	60.277	ENSPPYG00000006604	LARP6	85	59.039	Pongo_abelii
ENSIPUG00000010187	larp6	65	59.815	ENSPCOG00000022934	LARP6	85	59.174	Propithecus_coquereli
ENSIPUG00000010187	larp6	65	60.277	ENSPVAG00000005618	LARP6	85	60.183	Pteropus_vampyrus
ENSIPUG00000010187	larp6	74	78.831	ENSPNYG00000009835	larp6a	94	77.778	Pundamilia_nyererei
ENSIPUG00000010187	larp6	98	68.175	ENSPNAG00000017966	larp6a	100	68.966	Pygocentrus_nattereri
ENSIPUG00000010187	larp6	65	60.508	ENSRNOG00000012438	Larp6	86	59.775	Rattus_norvegicus
ENSIPUG00000010187	larp6	65	60.277	ENSRBIG00000032902	LARP6	86	59.039	Rhinopithecus_bieti
ENSIPUG00000010187	larp6	65	60.277	ENSRROG00000043074	LARP6	85	59.039	Rhinopithecus_roxellana
ENSIPUG00000010187	larp6	65	60.185	ENSSBOG00000024190	LARP6	98	59.310	Saimiri_boliviensis_boliviensis
ENSIPUG00000010187	larp6	66	56.818	ENSSHAG00000018495	LARP6	99	57.045	Sarcophilus_harrisii
ENSIPUG00000010187	larp6	73	71.690	ENSSFOG00015002254	LARP6	93	71.690	Scleropages_formosus
ENSIPUG00000010187	larp6	78	72.640	ENSSFOG00015023268	larp6a	100	72.447	Scleropages_formosus
ENSIPUG00000010187	larp6	100	64.185	ENSSMAG00000009953	larp6a	100	63.202	Scophthalmus_maximus
ENSIPUG00000010187	larp6	100	63.866	ENSSDUG00000007438	larp6a	100	63.508	Seriola_dumerili
ENSIPUG00000010187	larp6	100	64.185	ENSSLDG00000016647	larp6a	100	63.830	Seriola_lalandi_dorsalis
ENSIPUG00000010187	larp6	65	61.485	ENSSPUG00000011312	LARP6	97	61.021	Sphenodon_punctatus
ENSIPUG00000010187	larp6	100	66.054	ENSSPAG00000020502	larp6a	100	65.057	Stegastes_partitus
ENSIPUG00000010187	larp6	65	61.009	ENSSSCG00000004974	LARP6	85	60.092	Sus_scrofa
ENSIPUG00000010187	larp6	65	59.954	ENSTGUG00000005808	LARP6	98	59.722	Taeniopygia_guttata
ENSIPUG00000010187	larp6	100	63.262	ENSTRUG00000003151	larp6a	100	63.597	Takifugu_rubripes
ENSIPUG00000010187	larp6	73	73.878	ENSTNIG00000011926	larp6a	98	73.469	Tetraodon_nigroviridis
ENSIPUG00000010187	larp6	65	59.397	ENSTBEG00000015077	LARP6	98	59.217	Tupaia_belangeri
ENSIPUG00000010187	larp6	65	59.722	ENSUAMG00000010467	LARP6	85	59.685	Ursus_americanus
ENSIPUG00000010187	larp6	65	59.954	ENSVVUG00000015227	LARP6	94	58.559	Vulpes_vulpes
ENSIPUG00000010187	larp6	71	60.833	ENSXETG00000020340	larp6	93	60.377	Xenopus_tropicalis
ENSIPUG00000010187	larp6	73	78.323	ENSXCOG00000012654	larp6a	98	77.710	Xiphophorus_couchianus
ENSIPUG00000010187	larp6	100	64.781	ENSXMAG00000021015	larp6a	96	63.649	Xiphophorus_maculatus