EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000010214 (Gene tree)
Gene ID: 108270198
Gene Symbol: SLIRP
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 2384 bases
Position: chr9:2152187-2154570
Accession: 108270198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014992	RRM_1	PF00076.22	6.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015620	-	303	XM_017476626	ENSIPUP00000014992	100 (aa)	XP_017332115	W5UJT2
ENSIPUT00000015612	-	1661	-	ENSIPUP00000014984	137 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000010214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010214	SLIRP	85	51.765	ENSG00000119705	SLIRP	92	55.714	Homo_sapiens
ENSIPUG00000010214	SLIRP	98	76.531	ENSAPOG00000001298	slirp	98	76.531	Acanthochromis_polyacanthus
ENSIPUG00000010214	SLIRP	70	52.857	ENSAMEG00000003975	SLIRP	77	52.857	Ailuropoda_melanoleuca
ENSIPUG00000010214	SLIRP	96	73.958	ENSACIG00000023083	slirp	95	73.958	Amphilophus_citrinellus
ENSIPUG00000010214	SLIRP	96	73.958	ENSAOCG00000006342	slirp	97	73.958	Amphiprion_ocellaris
ENSIPUG00000010214	SLIRP	96	73.958	ENSAPEG00000015917	slirp	97	73.958	Amphiprion_percula
ENSIPUG00000010214	SLIRP	96	73.958	ENSAPEG00000015719	-	98	73.958	Amphiprion_percula
ENSIPUG00000010214	SLIRP	98	74.490	ENSATEG00000013525	slirp	98	74.490	Anabas_testudineus
ENSIPUG00000010214	SLIRP	99	68.687	ENSAMXG00000018693	slirp	99	68.687	Astyanax_mexicanus
ENSIPUG00000010214	SLIRP	87	52.874	ENSCJAG00000016946	SLIRP	80	52.874	Callithrix_jacchus
ENSIPUG00000010214	SLIRP	87	50.562	ENSCAFG00020015876	-	80	50.562	Canis_lupus_dingo
ENSIPUG00000010214	SLIRP	87	51.724	ENSCCAG00000030130	SLIRP	80	51.724	Cebus_capucinus
ENSIPUG00000010214	SLIRP	87	50.575	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSIPUG00000010214	SLIRP	87	51.724	ENSCSAG00000011736	SLIRP	80	51.724	Chlorocebus_sabaeus
ENSIPUG00000010214	SLIRP	89	61.798	ENSCPBG00000026327	SLIRP	88	61.798	Chrysemys_picta_bellii
ENSIPUG00000010214	SLIRP	75	57.895	ENSCANG00000032892	SLIRP	66	63.077	Colobus_angolensis_palliatus
ENSIPUG00000010214	SLIRP	87	44.828	ENSCGRG00001024068	Slirp	78	44.828	Cricetulus_griseus_chok1gshd
ENSIPUG00000010214	SLIRP	87	44.828	ENSCGRG00000017440	Slirp	78	44.828	Cricetulus_griseus_crigri
ENSIPUG00000010214	SLIRP	84	55.952	ENSCSEG00000015766	slirp	86	55.952	Cynoglossus_semilaevis
ENSIPUG00000010214	SLIRP	90	72.222	ENSCVAG00000012504	slirp	86	72.222	Cyprinodon_variegatus
ENSIPUG00000010214	SLIRP	91	81.319	ENSDARG00000097753	slirp	91	80.851	Danio_rerio
ENSIPUG00000010214	SLIRP	85	43.529	ENSDNOG00000007721	SLIRP	77	43.529	Dasypus_novemcinctus
ENSIPUG00000010214	SLIRP	75	53.333	ENSDORG00000012379	Slirp	68	53.333	Dipodomys_ordii
ENSIPUG00000010214	SLIRP	75	58.667	ENSETEG00000010345	SLIRP	69	58.667	Echinops_telfairi
ENSIPUG00000010214	SLIRP	74	59.459	ENSEASG00005020193	SLIRP	67	59.459	Equus_asinus_asinus
ENSIPUG00000010214	SLIRP	85	44.706	ENSEEUG00000007257	SLIRP	84	44.706	Erinaceus_europaeus
ENSIPUG00000010214	SLIRP	99	76.768	ENSELUG00000016800	slirp	98	76.768	Esox_lucius
ENSIPUG00000010214	SLIRP	65	60.000	ENSFCAG00000036326	SLIRP	66	60.000	Felis_catus
ENSIPUG00000010214	SLIRP	78	57.692	ENSFALG00000012583	SLIRP	85	52.222	Ficedula_albicollis
ENSIPUG00000010214	SLIRP	88	47.727	ENSFDAG00000008347	SLIRP	76	47.727	Fukomys_damarensis
ENSIPUG00000010214	SLIRP	77	75.325	ENSFHEG00000004709	slirp	84	75.325	Fundulus_heteroclitus
ENSIPUG00000010214	SLIRP	99	69.697	ENSGMOG00000016948	slirp	95	69.697	Gadus_morhua
ENSIPUG00000010214	SLIRP	88	57.955	ENSGALG00000031238	SLIRP	85	57.955	Gallus_gallus
ENSIPUG00000010214	SLIRP	98	73.469	ENSGAFG00000010998	slirp	98	73.469	Gambusia_affinis
ENSIPUG00000010214	SLIRP	82	71.951	ENSGACG00000020137	slirp	95	71.951	Gasterosteus_aculeatus
ENSIPUG00000010214	SLIRP	98	58.000	ENSGAGG00000009953	SLIRP	69	58.000	Gopherus_agassizii
ENSIPUG00000010214	SLIRP	85	51.765	ENSGGOG00000011059	-	77	51.765	Gorilla_gorilla
ENSIPUG00000010214	SLIRP	71	50.704	ENSHGLG00000018491	SLIRP	64	50.704	Heterocephalus_glaber_female
ENSIPUG00000010214	SLIRP	71	50.704	ENSHGLG00100014153	SLIRP	64	50.704	Heterocephalus_glaber_male
ENSIPUG00000010214	SLIRP	99	75.758	ENSHCOG00000006795	slirp	100	75.758	Hippocampus_comes
ENSIPUG00000010214	SLIRP	88	48.864	ENSSTOG00000034316	SLIRP	77	48.864	Ictidomys_tridecemlineatus
ENSIPUG00000010214	SLIRP	98	69.388	ENSKMAG00000002038	slirp	94	69.388	Kryptolebias_marmoratus
ENSIPUG00000010214	SLIRP	98	64.286	ENSLBEG00000007564	slirp	98	64.286	Labrus_bergylta
ENSIPUG00000010214	SLIRP	99	71.717	ENSLACG00000013434	SLIRP	95	71.717	Latimeria_chalumnae
ENSIPUG00000010214	SLIRP	87	51.724	ENSMFAG00000042960	SLIRP	80	51.724	Macaca_fascicularis
ENSIPUG00000010214	SLIRP	83	55.422	ENSMMUG00000029256	SLIRP	70	61.538	Macaca_mulatta
ENSIPUG00000010214	SLIRP	87	51.724	ENSMNEG00000028921	SLIRP	80	51.724	Macaca_nemestrina
ENSIPUG00000010214	SLIRP	65	61.538	ENSMLEG00000043644	SLIRP	66	61.538	Mandrillus_leucophaeus
ENSIPUG00000010214	SLIRP	96	80.208	ENSMZEG00005004617	slirp	97	80.208	Maylandia_zebra
ENSIPUG00000010214	SLIRP	78	50.000	ENSMAUG00000003857	Slirp	70	50.000	Mesocricetus_auratus
ENSIPUG00000010214	SLIRP	72	51.389	ENSMICG00000012080	SLIRP	67	51.389	Microcebus_murinus
ENSIPUG00000010214	SLIRP	74	52.703	ENSMOCG00000016019	Slirp	69	52.857	Microtus_ochrogaster
ENSIPUG00000010214	SLIRP	98	72.449	ENSMMOG00000018268	slirp	98	72.449	Mola_mola
ENSIPUG00000010214	SLIRP	70	54.286	ENSMODG00000005207	-	99	54.286	Monodelphis_domestica
ENSIPUG00000010214	SLIRP	98	65.306	ENSMALG00000012581	slirp	100	65.306	Monopterus_albus
ENSIPUG00000010214	SLIRP	74	54.054	MGP_CAROLIEiJ_G0017995	Slirp	69	54.054	Mus_caroli
ENSIPUG00000010214	SLIRP	74	54.054	ENSMUSG00000021040	Slirp	71	52.857	Mus_musculus
ENSIPUG00000010214	SLIRP	74	54.054	MGP_SPRETEiJ_G0018840	Slirp	66	54.054	Mus_spretus
ENSIPUG00000010214	SLIRP	73	56.164	ENSMLUG00000024998	-	74	53.571	Myotis_lucifugus
ENSIPUG00000010214	SLIRP	84	53.571	ENSMLUG00000029544	-	74	53.571	Myotis_lucifugus
ENSIPUG00000010214	SLIRP	74	48.649	ENSNGAG00000016363	Slirp	71	48.649	Nannospalax_galili
ENSIPUG00000010214	SLIRP	88	46.591	ENSNLEG00000032459	-	81	46.591	Nomascus_leucogenys
ENSIPUG00000010214	SLIRP	88	46.591	ENSNLEG00000027238	-	80	52.857	Nomascus_leucogenys
ENSIPUG00000010214	SLIRP	76	57.895	ENSODEG00000012580	SLIRP	76	57.143	Octodon_degus
ENSIPUG00000010214	SLIRP	96	79.167	ENSONIG00000011692	slirp	97	79.167	Oreochromis_niloticus
ENSIPUG00000010214	SLIRP	86	57.471	ENSOANG00000022366	SLIRP	78	57.471	Ornithorhynchus_anatinus
ENSIPUG00000010214	SLIRP	98	75.510	ENSORLG00000010761	slirp	76	75.510	Oryzias_latipes
ENSIPUG00000010214	SLIRP	98	74.490	ENSORLG00020022188	slirp	98	74.490	Oryzias_latipes_hni
ENSIPUG00000010214	SLIRP	97	75.258	ENSORLG00015020171	slirp	96	75.258	Oryzias_latipes_hsok
ENSIPUG00000010214	SLIRP	98	75.510	ENSOMEG00000019321	slirp	98	75.510	Oryzias_melastigma
ENSIPUG00000010214	SLIRP	85	52.941	ENSPPAG00000040710	-	77	52.941	Pan_paniscus
ENSIPUG00000010214	SLIRP	65	60.000	ENSPPRG00000014350	SLIRP	66	60.000	Panthera_pardus
ENSIPUG00000010214	SLIRP	65	60.000	ENSPTIG00000014196	SLIRP	66	60.000	Panthera_tigris_altaica
ENSIPUG00000010214	SLIRP	85	51.765	ENSPTRG00000030691	SLIRP	79	51.765	Pan_troglodytes
ENSIPUG00000010214	SLIRP	87	51.724	ENSPANG00000026323	SLIRP	80	51.724	Papio_anubis
ENSIPUG00000010214	SLIRP	80	61.250	ENSPKIG00000008831	slirp	78	61.250	Paramormyrops_kingsleyae
ENSIPUG00000010214	SLIRP	80	80.000	ENSPMGG00000010541	slirp	92	80.000	Periophthalmus_magnuspinnatus
ENSIPUG00000010214	SLIRP	74	51.351	ENSPEMG00000013234	Slirp	69	51.429	Peromyscus_maniculatus_bairdii
ENSIPUG00000010214	SLIRP	85	51.765	ENSPMAG00000009355	slirp	94	51.765	Petromyzon_marinus
ENSIPUG00000010214	SLIRP	79	45.570	ENSPCIG00000026842	-	85	45.570	Phascolarctos_cinereus
ENSIPUG00000010214	SLIRP	98	73.469	ENSPFOG00000006758	slirp	98	73.469	Poecilia_formosa
ENSIPUG00000010214	SLIRP	98	72.449	ENSPLAG00000011140	slirp	98	72.449	Poecilia_latipinna
ENSIPUG00000010214	SLIRP	98	73.469	ENSPMEG00000019535	slirp	98	73.469	Poecilia_mexicana
ENSIPUG00000010214	SLIRP	98	72.449	ENSPREG00000011673	slirp	98	72.449	Poecilia_reticulata
ENSIPUG00000010214	SLIRP	87	51.724	ENSPPYG00000006030	SLIRP	80	51.724	Pongo_abelii
ENSIPUG00000010214	SLIRP	76	48.684	ENSPCOG00000015159	SLIRP	67	50.000	Propithecus_coquereli
ENSIPUG00000010214	SLIRP	98	78.571	ENSPNAG00000008633	slirp	99	78.571	Pygocentrus_nattereri
ENSIPUG00000010214	SLIRP	65	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSIPUG00000010214	SLIRP	85	48.235	ENSRBIG00000035817	-	79	48.235	Rhinopithecus_bieti
ENSIPUG00000010214	SLIRP	67	58.209	ENSRBIG00000032998	-	60	60.000	Rhinopithecus_bieti
ENSIPUG00000010214	SLIRP	87	54.023	ENSRBIG00000032222	-	80	54.023	Rhinopithecus_bieti
ENSIPUG00000010214	SLIRP	67	59.701	ENSRROG00000017133	-	70	59.701	Rhinopithecus_roxellana
ENSIPUG00000010214	SLIRP	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSIPUG00000010214	SLIRP	87	54.023	ENSRROG00000036656	-	80	54.023	Rhinopithecus_roxellana
ENSIPUG00000010214	SLIRP	71	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSIPUG00000010214	SLIRP	65	58.462	ENSSBOG00000020014	SLIRP	70	58.462	Saimiri_boliviensis_boliviensis
ENSIPUG00000010214	SLIRP	100	63.000	ENSSFOG00015011165	slirp	100	63.000	Scleropages_formosus
ENSIPUG00000010214	SLIRP	100	49.000	ENSSMAG00000012930	slirp	95	49.000	Scophthalmus_maximus
ENSIPUG00000010214	SLIRP	98	72.449	ENSSDUG00000021883	slirp	64	72.449	Seriola_dumerili
ENSIPUG00000010214	SLIRP	98	72.449	ENSSLDG00000023136	slirp	89	72.449	Seriola_lalandi_dorsalis
ENSIPUG00000010214	SLIRP	82	60.465	ENSSPUG00000009346	SLIRP	88	60.465	Sphenodon_punctatus
ENSIPUG00000010214	SLIRP	98	68.367	ENSSPAG00000013477	slirp	98	68.367	Stegastes_partitus
ENSIPUG00000010214	SLIRP	75	53.333	ENSSSCG00000028167	SLIRP	68	53.333	Sus_scrofa
ENSIPUG00000010214	SLIRP	78	58.974	ENSTGUG00000012337	SLIRP	88	55.914	Taeniopygia_guttata
ENSIPUG00000010214	SLIRP	100	65.347	ENSTRUG00000020127	slirp	100	65.347	Takifugu_rubripes
ENSIPUG00000010214	SLIRP	76	57.895	ENSUAMG00000022445	SLIRP	68	57.895	Ursus_americanus
ENSIPUG00000010214	SLIRP	76	57.895	ENSUMAG00000007166	SLIRP	68	57.895	Ursus_maritimus
ENSIPUG00000010214	SLIRP	87	47.126	ENSVPAG00000001781	SLIRP	80	47.126	Vicugna_pacos
ENSIPUG00000010214	SLIRP	76	56.579	ENSVVUG00000004436	SLIRP	68	56.579	Vulpes_vulpes
ENSIPUG00000010214	SLIRP	81	71.605	ENSXETG00000030343	SLIRP	91	71.605	Xenopus_tropicalis
ENSIPUG00000010214	SLIRP	98	71.429	ENSXCOG00000009422	slirp	98	71.429	Xiphophorus_couchianus
ENSIPUG00000010214	SLIRP	98	73.469	ENSXMAG00000015655	slirp	98	73.469	Xiphophorus_maculatus