EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010242 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 1444 bases
Position: chrLBML01024979.1:21-1464
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000015021	RVT_1	PF00078.27	8e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015651	-	1444	-	ENSIPUP00000015021	376 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000010242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010242	-	66	30.364	ENSIPUG00000008598	-	84	30.364
ENSIPUG00000010242	-	97	33.780	ENSIPUG00000010986	-	74	33.780
ENSIPUG00000010242	-	53	34.500	ENSIPUG00000000853	-	52	34.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010242	-	66	36.905	ENSAPOG00000015742	-	79	36.905	Acanthochromis_polyacanthus
ENSIPUG00000010242	-	61	31.602	ENSAPOG00000001366	-	64	31.602	Acanthochromis_polyacanthus
ENSIPUG00000010242	-	62	30.342	ENSAPOG00000014771	-	58	30.342	Acanthochromis_polyacanthus
ENSIPUG00000010242	-	69	34.866	ENSACIG00000020856	-	56	34.866	Amphilophus_citrinellus
ENSIPUG00000010242	-	58	33.182	ENSACIG00000010538	-	57	33.182	Amphilophus_citrinellus
ENSIPUG00000010242	-	60	32.159	ENSACIG00000020849	-	51	32.159	Amphilophus_citrinellus
ENSIPUG00000010242	-	66	33.992	ENSAOCG00000000894	-	75	34.646	Amphiprion_ocellaris
ENSIPUG00000010242	-	60	32.895	ENSAOCG00000019069	-	61	32.895	Amphiprion_ocellaris
ENSIPUG00000010242	-	51	41.451	ENSATEG00000019721	-	50	41.451	Anabas_testudineus
ENSIPUG00000010242	-	78	32.781	ENSACAG00000010816	-	84	32.781	Anolis_carolinensis
ENSIPUG00000010242	-	97	31.880	ENSACLG00000003896	-	66	31.880	Astatotilapia_calliptera
ENSIPUG00000010242	-	70	37.828	ENSACLG00000011319	-	69	37.828	Astatotilapia_calliptera
ENSIPUG00000010242	-	55	39.320	ENSACLG00000012857	-	55	39.320	Astatotilapia_calliptera
ENSIPUG00000010242	-	97	32.791	ENSACLG00000010837	-	89	32.791	Astatotilapia_calliptera
ENSIPUG00000010242	-	62	38.462	ENSACLG00000013571	-	57	38.462	Astatotilapia_calliptera
ENSIPUG00000010242	-	82	31.329	ENSAMXG00000038901	-	64	31.329	Astyanax_mexicanus
ENSIPUG00000010242	-	57	37.674	ENSAMXG00000041014	-	81	37.674	Astyanax_mexicanus
ENSIPUG00000010242	-	92	30.000	ENSAMXG00000040763	-	88	30.000	Astyanax_mexicanus
ENSIPUG00000010242	-	69	30.189	ENSCVAG00000000484	-	88	30.189	Cyprinodon_variegatus
ENSIPUG00000010242	-	57	32.110	ENSCVAG00000020933	-	54	32.110	Cyprinodon_variegatus
ENSIPUG00000010242	-	65	33.333	ENSCVAG00000018360	-	59	33.333	Cyprinodon_variegatus
ENSIPUG00000010242	-	60	30.303	ENSELUG00000014378	-	60	30.303	Esox_lucius
ENSIPUG00000010242	-	59	34.081	ENSGAGG00000013921	-	60	34.081	Gopherus_agassizii
ENSIPUG00000010242	-	61	35.065	ENSHBUG00000007736	-	55	35.065	Haplochromis_burtoni
ENSIPUG00000010242	-	64	35.417	ENSKMAG00000014393	-	56	35.417	Kryptolebias_marmoratus
ENSIPUG00000010242	-	61	35.808	ENSLBEG00000020242	-	62	35.808	Labrus_bergylta
ENSIPUG00000010242	-	69	31.273	ENSLBEG00000004148	-	55	31.273	Labrus_bergylta
ENSIPUG00000010242	-	53	33.668	ENSLBEG00000023714	-	55	33.668	Labrus_bergylta
ENSIPUG00000010242	-	75	32.069	ENSLACG00000022331	-	85	32.069	Latimeria_chalumnae
ENSIPUG00000010242	-	68	30.798	ENSLACG00000022376	-	54	30.798	Latimeria_chalumnae
ENSIPUG00000010242	-	62	30.380	ENSMAMG00000001976	-	88	30.380	Mastacembelus_armatus
ENSIPUG00000010242	-	70	37.828	ENSMZEG00005008304	-	62	37.828	Maylandia_zebra
ENSIPUG00000010242	-	53	39.500	ENSMZEG00005016362	-	69	39.500	Maylandia_zebra
ENSIPUG00000010242	-	97	33.062	ENSMZEG00005006211	-	89	33.062	Maylandia_zebra
ENSIPUG00000010242	-	70	37.828	ENSMZEG00005025877	-	62	37.828	Maylandia_zebra
ENSIPUG00000010242	-	66	32.400	ENSNBRG00000000972	-	61	32.400	Neolamprologus_brichardi
ENSIPUG00000010242	-	57	31.019	ENSNBRG00000013792	-	62	31.019	Neolamprologus_brichardi
ENSIPUG00000010242	-	65	35.772	ENSNBRG00000012595	-	56	35.772	Neolamprologus_brichardi
ENSIPUG00000010242	-	61	33.772	ENSNBRG00000022130	-	54	33.772	Neolamprologus_brichardi
ENSIPUG00000010242	-	62	32.773	ENSNBRG00000016257	-	82	32.773	Neolamprologus_brichardi
ENSIPUG00000010242	-	97	33.058	ENSORLG00000029928	-	54	33.058	Oryzias_latipes
ENSIPUG00000010242	-	97	32.240	ENSORLG00000029071	-	54	32.240	Oryzias_latipes
ENSIPUG00000010242	-	63	34.322	ENSORLG00000024236	-	62	34.322	Oryzias_latipes
ENSIPUG00000010242	-	55	34.466	ENSORLG00000028454	-	64	34.466	Oryzias_latipes
ENSIPUG00000010242	-	66	38.645	ENSORLG00000023713	-	63	38.645	Oryzias_latipes
ENSIPUG00000010242	-	74	33.574	ENSORLG00000030126	-	63	33.574	Oryzias_latipes
ENSIPUG00000010242	-	97	33.424	ENSORLG00000028706	-	73	33.424	Oryzias_latipes
ENSIPUG00000010242	-	55	38.350	ENSORLG00020007002	-	80	38.350	Oryzias_latipes_hni
ENSIPUG00000010242	-	95	30.685	ENSORLG00020014626	-	66	30.685	Oryzias_latipes_hni
ENSIPUG00000010242	-	82	33.226	ENSORLG00020007779	-	83	33.226	Oryzias_latipes_hni
ENSIPUG00000010242	-	90	31.157	ENSORLG00020018629	-	88	31.157	Oryzias_latipes_hni
ENSIPUG00000010242	-	55	36.538	ENSORLG00020014149	-	64	36.538	Oryzias_latipes_hni
ENSIPUG00000010242	-	97	32.782	ENSORLG00020004271	-	53	32.782	Oryzias_latipes_hni
ENSIPUG00000010242	-	65	35.628	ENSORLG00020022004	-	84	35.628	Oryzias_latipes_hni
ENSIPUG00000010242	-	95	33.795	ENSORLG00020016429	-	69	33.795	Oryzias_latipes_hni
ENSIPUG00000010242	-	97	33.058	ENSORLG00020010425	-	63	33.058	Oryzias_latipes_hni
ENSIPUG00000010242	-	97	32.877	ENSORLG00020017925	-	64	32.877	Oryzias_latipes_hni
ENSIPUG00000010242	-	93	32.092	ENSORLG00015007703	-	89	32.092	Oryzias_latipes_hsok
ENSIPUG00000010242	-	93	30.704	ENSORLG00015021206	-	69	30.704	Oryzias_latipes_hsok
ENSIPUG00000010242	-	60	36.889	ENSORLG00015020895	-	59	36.889	Oryzias_latipes_hsok
ENSIPUG00000010242	-	91	34.604	ENSORLG00015007976	-	91	34.604	Oryzias_latipes_hsok
ENSIPUG00000010242	-	77	32.069	ENSOMEG00000022009	-	62	32.069	Oryzias_melastigma
ENSIPUG00000010242	-	61	35.931	ENSPKIG00000013511	-	79	35.931	Paramormyrops_kingsleyae
ENSIPUG00000010242	-	61	37.229	ENSPLAG00000015080	-	55	37.229	Poecilia_latipinna
ENSIPUG00000010242	-	73	39.273	ENSPLAG00000008560	-	84	39.273	Poecilia_latipinna
ENSIPUG00000010242	-	83	31.402	ENSPMEG00000004673	-	80	31.402	Poecilia_mexicana
ENSIPUG00000010242	-	73	31.206	ENSPMEG00000003715	-	92	31.206	Poecilia_mexicana
ENSIPUG00000010242	-	89	31.579	ENSPREG00000006501	-	60	31.579	Poecilia_reticulata
ENSIPUG00000010242	-	61	39.565	ENSPREG00000004933	-	58	39.565	Poecilia_reticulata
ENSIPUG00000010242	-	73	34.520	ENSPREG00000010319	-	66	34.520	Poecilia_reticulata
ENSIPUG00000010242	-	60	33.333	ENSPREG00000001352	-	63	33.333	Poecilia_reticulata
ENSIPUG00000010242	-	58	37.220	ENSPNYG00000002466	-	72	37.220	Pundamilia_nyererei
ENSIPUG00000010242	-	60	37.445	ENSPNYG00000002652	-	58	37.445	Pundamilia_nyererei
ENSIPUG00000010242	-	72	33.942	ENSPNAG00000024749	-	64	33.942	Pygocentrus_nattereri
ENSIPUG00000010242	-	69	35.741	ENSPNAG00000002786	-	64	35.741	Pygocentrus_nattereri
ENSIPUG00000010242	-	59	33.184	ENSPNAG00000010342	-	67	33.184	Pygocentrus_nattereri
ENSIPUG00000010242	-	57	35.047	ENSSDUG00000021791	-	70	35.047	Seriola_dumerili
ENSIPUG00000010242	-	53	30.348	ENSSLDG00000008400	-	80	30.348	Seriola_lalandi_dorsalis
ENSIPUG00000010242	-	71	35.636	ENSSPUG00000015446	-	61	35.636	Sphenodon_punctatus
ENSIPUG00000010242	-	81	30.794	ENSSPAG00000000151	-	67	30.794	Stegastes_partitus
ENSIPUG00000010242	-	57	30.233	ENSSPAG00000012089	-	55	30.233	Stegastes_partitus
ENSIPUG00000010242	-	52	35.385	ENSXCOG00000016894	-	57	35.385	Xiphophorus_couchianus
ENSIPUG00000010242	-	61	40.773	ENSXMAG00000023211	-	50	40.773	Xiphophorus_maculatus