EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010429 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5455 bases
Position: chr13:10328850-10334304
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000015325	RVT_1	PF00078.27	7.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015972	-	780	-	ENSIPUP00000015325	259 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000010429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010429	-	80	30.583	ENSIPUG00000006522	-	66	30.583
ENSIPUG00000010429	-	67	97.688	ENSIPUG00000009841	-	70	97.688
ENSIPUG00000010429	-	78	92.574	ENSIPUG00000002371	-	78	92.574
ENSIPUG00000010429	-	80	97.115	ENSIPUG00000000759	-	95	97.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010429	-	93	57.025	ENSACIG00000002701	-	96	57.025	Amphilophus_citrinellus
ENSIPUG00000010429	-	93	57.025	ENSACIG00000017535	-	96	57.025	Amphilophus_citrinellus
ENSIPUG00000010429	-	93	57.438	ENSACIG00000002047	-	95	57.438	Amphilophus_citrinellus
ENSIPUG00000010429	-	75	35.025	ENSHCOG00000010320	-	80	35.025	Hippocampus_comes
ENSIPUG00000010429	-	83	32.407	ENSLACG00000006232	-	95	32.407	Latimeria_chalumnae
ENSIPUG00000010429	-	92	53.527	ENSMZEG00005010519	-	95	53.527	Maylandia_zebra
ENSIPUG00000010429	-	71	30.645	ENSORLG00000028489	-	71	30.645	Oryzias_latipes
ENSIPUG00000010429	-	92	31.557	ENSPSIG00000001771	-	77	31.557	Pelodiscus_sinensis