EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010533 (Gene tree)
Gene ID: 108255698
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6101 bases
Position: chr22:7762972-7769072
Accession: 108255698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000015463	RRM_1	PF00076.22	9.9e-28	1	2
ENSIPUP00000015463	RRM_1	PF00076.22	9.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000016123	-	1523	XM_017451837	ENSIPUP00000015463	378 (aa)	XP_017307326	A0A2D0PPG8

Gene Model

Click here to download ENSIPUG00000010533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010533	grsf1	75	42.683	ENSIPUG00000024047	hnrnph1l	78	42.683
ENSIPUG00000010533	grsf1	76	55.263	ENSIPUG00000016015	hnrnph3	99	48.168
ENSIPUG00000010533	grsf1	75	44.237	ENSIPUG00000018262	hnrnph1	80	45.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010533	grsf1	84	54.819	ENSAPOG00000012487	grsf1	84	54.819	Acanthochromis_polyacanthus
ENSIPUG00000010533	grsf1	81	54.574	ENSACIG00000005871	grsf1	83	54.890	Amphilophus_citrinellus
ENSIPUG00000010533	grsf1	83	54.711	ENSAOCG00000017462	-	83	54.711	Amphiprion_ocellaris
ENSIPUG00000010533	grsf1	83	53.939	ENSAPEG00000007240	-	83	53.939	Amphiprion_percula
ENSIPUG00000010533	grsf1	83	53.517	ENSATEG00000007185	grsf1	83	53.517	Anabas_testudineus
ENSIPUG00000010533	grsf1	84	52.802	ENSACLG00000003685	-	85	52.802	Astatotilapia_calliptera
ENSIPUG00000010533	grsf1	99	57.567	ENSAMXG00000012270	grsf1	99	57.567	Astyanax_mexicanus
ENSIPUG00000010533	grsf1	88	47.175	ENSCSEG00000019209	-	92	48.023	Cynoglossus_semilaevis
ENSIPUG00000010533	grsf1	94	49.206	ENSCVAG00000004476	grsf1	98	49.206	Cyprinodon_variegatus
ENSIPUG00000010533	grsf1	100	50.384	ENSDARG00000053021	grsf1	95	50.384	Danio_rerio
ENSIPUG00000010533	grsf1	83	40.979	ENSFHEG00000013358	-	86	41.925	Fundulus_heteroclitus
ENSIPUG00000010533	grsf1	75	61.376	ENSGMOG00000014047	grsf1	81	61.376	Gadus_morhua
ENSIPUG00000010533	grsf1	80	52.830	ENSGAFG00000004496	grsf1	80	52.830	Gambusia_affinis
ENSIPUG00000010533	grsf1	75	50.938	ENSGACG00000014447	grsf1	97	50.938	Gasterosteus_aculeatus
ENSIPUG00000010533	grsf1	84	55.418	ENSHBUG00000006284	grsf1	80	55.418	Haplochromis_burtoni
ENSIPUG00000010533	grsf1	83	49.697	ENSHCOG00000007715	-	84	49.697	Hippocampus_comes
ENSIPUG00000010533	grsf1	79	51.411	ENSKMAG00000004528	grsf1	76	51.097	Kryptolebias_marmoratus
ENSIPUG00000010533	grsf1	76	49.662	ENSLBEG00000018100	grsf1	94	49.662	Labrus_bergylta
ENSIPUG00000010533	grsf1	79	56.037	ENSMAMG00000002627	grsf1	81	56.037	Mastacembelus_armatus
ENSIPUG00000010533	grsf1	79	54.938	ENSMZEG00005020633	-	80	54.938	Maylandia_zebra
ENSIPUG00000010533	grsf1	81	57.966	ENSMMOG00000014231	grsf1	89	55.455	Mola_mola
ENSIPUG00000010533	grsf1	82	54.518	ENSMALG00000000251	grsf1	82	54.518	Monopterus_albus
ENSIPUG00000010533	grsf1	79	54.012	ENSNBRG00000017774	grsf1	78	54.012	Neolamprologus_brichardi
ENSIPUG00000010533	grsf1	76	64.398	ENSONIG00000014119	grsf1	99	64.398	Oreochromis_niloticus
ENSIPUG00000010533	grsf1	80	50.000	ENSORLG00000030211	grsf1	81	50.000	Oryzias_latipes
ENSIPUG00000010533	grsf1	80	50.318	ENSORLG00020014383	grsf1	82	50.318	Oryzias_latipes_hni
ENSIPUG00000010533	grsf1	80	50.000	ENSORLG00015006520	grsf1	81	50.000	Oryzias_latipes_hsok
ENSIPUG00000010533	grsf1	80	53.651	ENSOMEG00000009181	grsf1	84	53.968	Oryzias_melastigma
ENSIPUG00000010533	grsf1	85	53.372	ENSPKIG00000019432	grsf1	83	53.372	Paramormyrops_kingsleyae
ENSIPUG00000010533	grsf1	86	53.258	ENSPMGG00000013654	grsf1	98	53.258	Periophthalmus_magnuspinnatus
ENSIPUG00000010533	grsf1	80	50.000	ENSPFOG00000006122	grsf1	80	50.000	Poecilia_formosa
ENSIPUG00000010533	grsf1	80	50.621	ENSPLAG00000020977	grsf1	80	50.621	Poecilia_latipinna
ENSIPUG00000010533	grsf1	80	50.920	ENSPMEG00000012485	grsf1	80	50.920	Poecilia_mexicana
ENSIPUG00000010533	grsf1	80	50.926	ENSPREG00000013383	grsf1	80	50.926	Poecilia_reticulata
ENSIPUG00000010533	grsf1	84	53.254	ENSPNYG00000005379	grsf1	85	53.254	Pundamilia_nyererei
ENSIPUG00000010533	grsf1	99	66.838	ENSPNAG00000014912	grsf1	99	66.838	Pygocentrus_nattereri
ENSIPUG00000010533	grsf1	82	48.318	ENSSFOG00015014620	grsf1	84	48.318	Scleropages_formosus
ENSIPUG00000010533	grsf1	80	54.603	ENSSMAG00000014181	grsf1	70	54.603	Scophthalmus_maximus
ENSIPUG00000010533	grsf1	79	60.328	ENSSDUG00000009397	-	95	60.137	Seriola_dumerili
ENSIPUG00000010533	grsf1	79	60.726	ENSSLDG00000025494	grsf1	95	56.997	Seriola_lalandi_dorsalis
ENSIPUG00000010533	grsf1	83	52.905	ENSSPAG00000023296	grsf1	82	52.905	Stegastes_partitus
ENSIPUG00000010533	grsf1	96	50.802	ENSTRUG00000015354	grsf1	95	50.802	Takifugu_rubripes
ENSIPUG00000010533	grsf1	79	54.762	ENSTNIG00000015350	-	95	54.762	Tetraodon_nigroviridis
ENSIPUG00000010533	grsf1	80	51.572	ENSXMAG00000029710	grsf1	80	51.572	Xiphophorus_maculatus