EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000010598 (Gene tree)
Gene ID: 108278943
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 116793 bases
Position: chr18:3995411-4112203
Accession: 108278943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000015664	DRY_EERY	PF09750.9	9.9e-32	1	1
ENSIPUP00000015588	DRY_EERY	PF09750.9	1.1e-31	1	1
ENSIPUP00000015559	DRY_EERY	PF09750.9	1.1e-31	1	1
ENSIPUP00000015664	Surp	PF01805.20	6.6e-29	1	2
ENSIPUP00000015664	Surp	PF01805.20	6.6e-29	2	2
ENSIPUP00000015588	Surp	PF01805.20	7.6e-29	1	2
ENSIPUP00000015588	Surp	PF01805.20	7.6e-29	2	2
ENSIPUP00000015559	Surp	PF01805.20	7.8e-29	1	2
ENSIPUP00000015559	Surp	PF01805.20	7.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000016304	-	3254	-	ENSIPUP00000015664	891 (aa)	-	-
ENSIPUT00000016251	-	4065	XM_017492730	ENSIPUP00000015588	940 (aa)	XP_017348219	A0A2D0SZX5
ENSIPUT00000016223	-	4092	XM_017492729	ENSIPUP00000015559	949 (aa)	XP_017348218	A0A2D0SZW4

Gene Model

Click here to download ENSIPUG00000010598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010598	sfswap	98	57.625	ENSG00000061936	SFSWAP	84	69.608	Homo_sapiens
ENSIPUG00000010598	sfswap	78	70.228	ENSAPOG00000005784	sfswap	86	71.201	Acanthochromis_polyacanthus
ENSIPUG00000010598	sfswap	98	50.295	ENSAMEG00000013818	SFSWAP	82	81.818	Ailuropoda_melanoleuca
ENSIPUG00000010598	sfswap	78	68.990	ENSAOCG00000016469	sfswap	85	71.387	Amphiprion_ocellaris
ENSIPUG00000010598	sfswap	78	69.263	ENSAPEG00000004965	sfswap	85	71.387	Amphiprion_percula
ENSIPUG00000010598	sfswap	78	70.580	ENSATEG00000021053	sfswap	99	58.635	Anabas_testudineus
ENSIPUG00000010598	sfswap	98	54.658	ENSAPLG00000013808	SFSWAP	96	56.904	Anas_platyrhynchos
ENSIPUG00000010598	sfswap	94	53.690	ENSACAG00000007220	SFSWAP	99	53.622	Anolis_carolinensis
ENSIPUG00000010598	sfswap	98	56.000	ENSANAG00000001518	SFSWAP	98	55.963	Aotus_nancymaae
ENSIPUG00000010598	sfswap	82	65.912	ENSACLG00000020159	sfswap	85	69.899	Astatotilapia_calliptera
ENSIPUG00000010598	sfswap	100	74.289	ENSAMXG00000008657	sfswap	99	73.727	Astyanax_mexicanus
ENSIPUG00000010598	sfswap	97	56.639	ENSBTAG00000000439	SFSWAP	98	55.676	Bos_taurus
ENSIPUG00000010598	sfswap	98	56.588	ENSCJAG00000003613	SFSWAP	98	56.959	Callithrix_jacchus
ENSIPUG00000010598	sfswap	98	56.437	ENSCAFG00000006625	SFSWAP	98	56.423	Canis_familiaris
ENSIPUG00000010598	sfswap	87	52.324	ENSCAFG00020011254	SFSWAP	98	51.699	Canis_lupus_dingo
ENSIPUG00000010598	sfswap	97	56.526	ENSCHIG00000008838	SFSWAP	98	56.263	Capra_hircus
ENSIPUG00000010598	sfswap	98	55.861	ENSTSYG00000010303	SFSWAP	98	56.187	Carlito_syrichta
ENSIPUG00000010598	sfswap	62	65.842	ENSCPOG00000005280	SFSWAP	51	52.789	Cavia_porcellus
ENSIPUG00000010598	sfswap	50	54.143	ENSCCAG00000037255	SFSWAP	98	55.071	Cebus_capucinus
ENSIPUG00000010598	sfswap	98	56.779	ENSCATG00000031094	SFSWAP	98	55.431	Cercocebus_atys
ENSIPUG00000010598	sfswap	60	66.089	ENSCLAG00000008380	SFSWAP	98	55.680	Chinchilla_lanigera
ENSIPUG00000010598	sfswap	98	56.677	ENSCSAG00000001884	SFSWAP	98	55.330	Chlorocebus_sabaeus
ENSIPUG00000010598	sfswap	76	65.396	ENSCHOG00000003578	SFSWAP	84	75.000	Choloepus_hoffmanni
ENSIPUG00000010598	sfswap	98	55.657	ENSCPBG00000024757	SFSWAP	97	54.900	Chrysemys_picta_bellii
ENSIPUG00000010598	sfswap	98	56.677	ENSCANG00000036501	SFSWAP	98	55.330	Colobus_angolensis_palliatus
ENSIPUG00000010598	sfswap	60	66.832	ENSCGRG00001011284	Sfswap	98	55.703	Cricetulus_griseus_chok1gshd
ENSIPUG00000010598	sfswap	60	66.832	ENSCGRG00000017417	Sfswap	98	55.703	Cricetulus_griseus_crigri
ENSIPUG00000010598	sfswap	99	56.085	ENSCSEG00000003773	sfswap	99	55.282	Cynoglossus_semilaevis
ENSIPUG00000010598	sfswap	100	67.861	ENSDARG00000005980	sfswap	100	69.270	Danio_rerio
ENSIPUG00000010598	sfswap	80	52.795	ENSDNOG00000018742	SFSWAP	98	54.033	Dasypus_novemcinctus
ENSIPUG00000010598	sfswap	98	47.137	ENSDORG00000010352	Sfswap	98	50.938	Dipodomys_ordii
ENSIPUG00000010598	sfswap	57	45.914	FBgn0003638	su(w[a])	56	58.427	Drosophila_melanogaster
ENSIPUG00000010598	sfswap	79	64.407	ENSETEG00000016657	-	91	48.370	Echinops_telfairi
ENSIPUG00000010598	sfswap	85	37.353	ENSEBUG00000016748	SFSWAP	92	42.345	Eptatretus_burgeri
ENSIPUG00000010598	sfswap	98	57.348	ENSEASG00005016502	SFSWAP	98	56.295	Equus_asinus_asinus
ENSIPUG00000010598	sfswap	96	57.038	ENSECAG00000007657	SFSWAP	98	55.694	Equus_caballus
ENSIPUG00000010598	sfswap	71	53.737	ENSEEUG00000001713	SFSWAP	99	47.128	Erinaceus_europaeus
ENSIPUG00000010598	sfswap	100	59.941	ENSELUG00000010942	sfswap	93	61.383	Esox_lucius
ENSIPUG00000010598	sfswap	98	58.316	ENSFCAG00000010778	SFSWAP	98	55.955	Felis_catus
ENSIPUG00000010598	sfswap	97	57.971	ENSFALG00000009577	SFSWAP	89	69.948	Ficedula_albicollis
ENSIPUG00000010598	sfswap	99	51.662	ENSFDAG00000017235	SFSWAP	98	55.397	Fukomys_damarensis
ENSIPUG00000010598	sfswap	98	52.396	ENSGALG00000002487	SFSWAP	81	79.412	Gallus_gallus
ENSIPUG00000010598	sfswap	99	59.574	ENSGAFG00000006272	sfswap	73	68.110	Gambusia_affinis
ENSIPUG00000010598	sfswap	75	81.081	ENSGACG00000017647	sfswap	83	82.353	Gasterosteus_aculeatus
ENSIPUG00000010598	sfswap	98	55.354	ENSGAGG00000002611	SFSWAP	97	54.518	Gopherus_agassizii
ENSIPUG00000010598	sfswap	98	56.795	ENSGGOG00000014877	SFSWAP	98	55.511	Gorilla_gorilla
ENSIPUG00000010598	sfswap	85	64.331	ENSHBUG00000005629	sfswap	82	73.171	Haplochromis_burtoni
ENSIPUG00000010598	sfswap	50	52.724	ENSHGLG00000019216	SFSWAP	98	56.110	Heterocephalus_glaber_female
ENSIPUG00000010598	sfswap	99	52.227	ENSHGLG00100019350	SFSWAP	98	56.110	Heterocephalus_glaber_male
ENSIPUG00000010598	sfswap	99	56.000	ENSSTOG00000000773	SFSWAP	98	55.691	Ictidomys_tridecemlineatus
ENSIPUG00000010598	sfswap	99	56.004	ENSJJAG00000006609	Sfswap	96	56.282	Jaculus_jaculus
ENSIPUG00000010598	sfswap	74	68.130	ENSKMAG00000013168	sfswap	87	60.637	Kryptolebias_marmoratus
ENSIPUG00000010598	sfswap	78	68.839	ENSLBEG00000010239	sfswap	74	67.914	Labrus_bergylta
ENSIPUG00000010598	sfswap	98	52.415	ENSLACG00000018678	SFSWAP	70	59.551	Latimeria_chalumnae
ENSIPUG00000010598	sfswap	63	74.010	ENSLOCG00000006202	sfswap	53	73.762	Lepisosteus_oculatus
ENSIPUG00000010598	sfswap	53	69.822	ENSLAFG00000014462	SFSWAP	99	55.087	Loxodonta_africana
ENSIPUG00000010598	sfswap	96	57.503	ENSMFAG00000037352	SFSWAP	98	53.475	Macaca_fascicularis
ENSIPUG00000010598	sfswap	98	57.803	ENSMMUG00000020343	SFSWAP	98	55.578	Macaca_mulatta
ENSIPUG00000010598	sfswap	98	57.803	ENSMNEG00000041002	SFSWAP	98	55.578	Macaca_nemestrina
ENSIPUG00000010598	sfswap	98	55.988	ENSMLEG00000035728	SFSWAP	98	54.434	Mandrillus_leucophaeus
ENSIPUG00000010598	sfswap	76	66.895	ENSMAMG00000006631	sfswap	71	69.727	Mastacembelus_armatus
ENSIPUG00000010598	sfswap	82	65.912	ENSMZEG00005017834	SFSWAP	69	69.899	Maylandia_zebra
ENSIPUG00000010598	sfswap	59	69.531	ENSMICG00000004465	SFSWAP	98	55.736	Microcebus_murinus
ENSIPUG00000010598	sfswap	60	66.584	ENSMOCG00000014390	Sfswap	51	51.297	Microtus_ochrogaster
ENSIPUG00000010598	sfswap	98	52.826	ENSMODG00000015581	SFSWAP	90	58.743	Monodelphis_domestica
ENSIPUG00000010598	sfswap	78	68.310	ENSMALG00000012603	sfswap	75	68.489	Monopterus_albus
ENSIPUG00000010598	sfswap	99	51.668	MGP_CAROLIEiJ_G0027780	Sfswap	92	67.419	Mus_caroli
ENSIPUG00000010598	sfswap	99	51.521	ENSMUSG00000029439	Sfswap	92	67.419	Mus_musculus
ENSIPUG00000010598	sfswap	99	51.016	MGP_PahariEiJ_G0024360	Sfswap	84	68.627	Mus_pahari
ENSIPUG00000010598	sfswap	99	51.521	MGP_SPRETEiJ_G0028779	Sfswap	92	67.419	Mus_spretus
ENSIPUG00000010598	sfswap	97	56.743	ENSMPUG00000002218	SFSWAP	98	56.057	Mustela_putorius_furo
ENSIPUG00000010598	sfswap	92	53.685	ENSMLUG00000011296	SFSWAP	88	56.835	Myotis_lucifugus
ENSIPUG00000010598	sfswap	99	54.409	ENSNGAG00000018167	Sfswap	98	55.431	Nannospalax_galili
ENSIPUG00000010598	sfswap	72	67.378	ENSNBRG00000020857	sfswap	83	69.414	Neolamprologus_brichardi
ENSIPUG00000010598	sfswap	96	55.407	ENSNLEG00000008386	SFSWAP	96	53.679	Nomascus_leucogenys
ENSIPUG00000010598	sfswap	67	76.786	ENSMEUG00000009556	-	73	75.806	Notamacropus_eugenii
ENSIPUG00000010598	sfswap	67	66.048	ENSOPRG00000006983	-	62	81.818	Ochotona_princeps
ENSIPUG00000010598	sfswap	99	53.036	ENSODEG00000008020	SFSWAP	98	54.721	Octodon_degus
ENSIPUG00000010598	sfswap	97	55.707	ENSONIG00000003757	sfswap	73	73.171	Oreochromis_niloticus
ENSIPUG00000010598	sfswap	53	68.935	ENSOANG00000013861	SFSWAP	99	55.738	Ornithorhynchus_anatinus
ENSIPUG00000010598	sfswap	50	50.674	ENSOCUG00000002165	SFSWAP	98	53.954	Oryctolagus_cuniculus
ENSIPUG00000010598	sfswap	74	68.750	ENSORLG00000010983	sfswap	71	69.209	Oryzias_latipes
ENSIPUG00000010598	sfswap	78	68.750	ENSORLG00020010779	sfswap	99	58.998	Oryzias_latipes_hni
ENSIPUG00000010598	sfswap	74	68.085	ENSORLG00015023093	sfswap	86	68.534	Oryzias_latipes_hsok
ENSIPUG00000010598	sfswap	74	67.842	ENSOMEG00000022065	sfswap	75	78.049	Oryzias_melastigma
ENSIPUG00000010598	sfswap	92	55.467	ENSOGAG00000016724	SFSWAP	97	56.050	Otolemur_garnettii
ENSIPUG00000010598	sfswap	97	56.366	ENSOARG00000014314	SFSWAP	98	55.396	Ovis_aries
ENSIPUG00000010598	sfswap	98	57.012	ENSPPAG00000036706	SFSWAP	98	55.511	Pan_paniscus
ENSIPUG00000010598	sfswap	97	55.809	ENSPPRG00000017318	SFSWAP	53	49.351	Panthera_pardus
ENSIPUG00000010598	sfswap	96	52.026	ENSPTIG00000004304	SFSWAP	96	66.080	Panthera_tigris_altaica
ENSIPUG00000010598	sfswap	58	70.052	ENSPTRG00000005640	SFSWAP	98	55.511	Pan_troglodytes
ENSIPUG00000010598	sfswap	98	56.779	ENSPANG00000019737	SFSWAP	98	55.431	Papio_anubis
ENSIPUG00000010598	sfswap	61	46.866	ENSPSIG00000017807	SFSWAP	85	48.644	Pelodiscus_sinensis
ENSIPUG00000010598	sfswap	90	68.529	ENSPCIG00000006062	SFSWAP	88	65.940	Phascolarctos_cinereus
ENSIPUG00000010598	sfswap	74	68.466	ENSPFOG00000019657	sfswap	71	68.777	Poecilia_formosa
ENSIPUG00000010598	sfswap	74	68.376	ENSPLAG00000008513	sfswap	71	68.687	Poecilia_latipinna
ENSIPUG00000010598	sfswap	74	68.466	ENSPMEG00000008716	sfswap	71	68.921	Poecilia_mexicana
ENSIPUG00000010598	sfswap	74	68.182	ENSPREG00000006692	sfswap	71	68.201	Poecilia_reticulata
ENSIPUG00000010598	sfswap	96	55.809	ENSPPYG00000005129	SFSWAP	99	54.872	Pongo_abelii
ENSIPUG00000010598	sfswap	57	61.583	ENSPCAG00000004977	-	60	59.851	Procavia_capensis
ENSIPUG00000010598	sfswap	98	55.714	ENSPCOG00000023786	SFSWAP	98	55.578	Propithecus_coquereli
ENSIPUG00000010598	sfswap	71	69.029	ENSPVAG00000014918	SFSWAP	86	59.929	Pteropus_vampyrus
ENSIPUG00000010598	sfswap	85	61.757	ENSPNYG00000012660	sfswap	84	69.220	Pundamilia_nyererei
ENSIPUG00000010598	sfswap	100	75.537	ENSPNAG00000007073	sfswap	100	74.233	Pygocentrus_nattereri
ENSIPUG00000010598	sfswap	58	66.337	ENSRNOG00000000931	Sfswap	98	56.172	Rattus_norvegicus
ENSIPUG00000010598	sfswap	98	54.327	ENSRBIG00000036330	SFSWAP	50	47.913	Rhinopithecus_bieti
ENSIPUG00000010598	sfswap	98	56.968	ENSRROG00000032001	SFSWAP	98	55.431	Rhinopithecus_roxellana
ENSIPUG00000010598	sfswap	58	69.531	ENSSBOG00000026217	SFSWAP	98	54.970	Saimiri_boliviensis_boliviensis
ENSIPUG00000010598	sfswap	93	54.109	ENSSHAG00000014232	SFSWAP	55	47.000	Sarcophilus_harrisii
ENSIPUG00000010598	sfswap	96	63.518	ENSSFOG00015000766	sfswap	96	62.039	Scleropages_formosus
ENSIPUG00000010598	sfswap	85	62.219	ENSSMAG00000018718	sfswap	69	65.205	Scophthalmus_maximus
ENSIPUG00000010598	sfswap	88	70.480	ENSSDUG00000021680	sfswap	83	70.707	Seriola_dumerili
ENSIPUG00000010598	sfswap	88	70.198	ENSSLDG00000010835	sfswap	82	70.563	Seriola_lalandi_dorsalis
ENSIPUG00000010598	sfswap	87	52.577	ENSSPUG00000010272	SFSWAP	91	62.411	Sphenodon_punctatus
ENSIPUG00000010598	sfswap	78	70.687	ENSSPAG00000014310	sfswap	84	69.559	Stegastes_partitus
ENSIPUG00000010598	sfswap	98	56.674	ENSSSCG00000009744	SFSWAP	98	55.828	Sus_scrofa
ENSIPUG00000010598	sfswap	98	53.814	ENSTGUG00000004623	SFSWAP	98	57.069	Taeniopygia_guttata
ENSIPUG00000010598	sfswap	87	69.870	ENSTTRG00000013478	SFSWAP	81	81.818	Tursiops_truncatus
ENSIPUG00000010598	sfswap	97	56.386	ENSUAMG00000016807	SFSWAP	51	53.347	Ursus_americanus
ENSIPUG00000010598	sfswap	89	67.697	ENSUMAG00000002957	SFSWAP	88	63.547	Ursus_maritimus
ENSIPUG00000010598	sfswap	97	56.906	ENSVVUG00000010753	SFSWAP	98	56.423	Vulpes_vulpes
ENSIPUG00000010598	sfswap	74	68.376	ENSXMAG00000009020	sfswap	71	68.398	Xiphophorus_maculatus