EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010748 (Gene tree)
Gene ID: 108276109
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 47410 bases
Position: chr15:21489460-21536869
Accession: 108276109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000015954	GTP_EFTU	PF00009.27	6.3e-47	1	1
ENSIPUP00000015905	GTP_EFTU	PF00009.27	6.5e-47	1	1
ENSIPUP00000015954	MMR_HSR1	PF01926.23	3.7e-06	1	1
ENSIPUP00000015905	MMR_HSR1	PF01926.23	3.8e-06	1	1
ENSIPUP00000015905	GTP_EFTU_D2	PF03144.25	7.7e-08	1	1
ENSIPUP00000015954	GTP_EFTU_D2	PF03144.25	7.8e-08	1	1
ENSIPUP00000015905	GTP_EFTU_D3	PF03143.17	1.7e-27	1	1
ENSIPUP00000015954	GTP_EFTU_D3	PF03143.17	7.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000016579	-	7094	XM_017487481	ENSIPUP00000015905	669 (aa)	XP_017342970	A0A2D0SL11
ENSIPUT00000016633	-	1980	-	ENSIPUP00000015954	659 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000010748's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010748	hbs1l	63	40.323	ENSIPUG00000023399	EEF1A1	93	40.323
ENSIPUG00000010748	hbs1l	63	40.323	ENSIPUG00000022421	eef1a1b	93	40.323
ENSIPUG00000010748	hbs1l	64	40.682	ENSIPUG00000019880	-	95	40.682
ENSIPUG00000010748	hbs1l	63	40.000	ENSIPUG00000011358	Gspt1	76	38.353
ENSIPUG00000010748	hbs1l	63	38.462	ENSIPUG00000004067	si:dkey-37o8.1	95	38.356
ENSIPUG00000010748	hbs1l	63	39.860	ENSIPUG00000008686	eef1a2	94	39.726
ENSIPUG00000010748	hbs1l	63	40.000	ENSIPUG00000001655	Gspt1	82	39.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010748	hbs1l	100	72.384	ENSG00000112339	HBS1L	95	84.472	Homo_sapiens
ENSIPUG00000010748	hbs1l	94	73.430	ENSAPOG00000013169	hbs1l	97	73.430	Acanthochromis_polyacanthus
ENSIPUG00000010748	hbs1l	99	72.384	ENSAMEG00000009749	HBS1L	99	72.384	Ailuropoda_melanoleuca
ENSIPUG00000010748	hbs1l	78	85.115	ENSACIG00000017087	hbs1l	91	85.115	Amphilophus_citrinellus
ENSIPUG00000010748	hbs1l	100	78.479	ENSAPEG00000008320	hbs1l	100	78.910	Amphiprion_percula
ENSIPUG00000010748	hbs1l	100	77.872	ENSATEG00000004459	hbs1l	100	77.872	Anabas_testudineus
ENSIPUG00000010748	hbs1l	98	70.987	ENSAPLG00000007791	HBS1L	100	71.134	Anas_platyrhynchos
ENSIPUG00000010748	hbs1l	100	71.843	ENSACAG00000010120	HBS1L	100	71.843	Anolis_carolinensis
ENSIPUG00000010748	hbs1l	100	72.793	ENSANAG00000038076	HBS1L	100	72.793	Aotus_nancymaae
ENSIPUG00000010748	hbs1l	100	77.746	ENSACLG00000010469	hbs1l	100	78.324	Astatotilapia_calliptera
ENSIPUG00000010748	hbs1l	100	89.971	ENSAMXG00000004260	hbs1l	100	89.971	Astyanax_mexicanus
ENSIPUG00000010748	hbs1l	100	72.134	ENSBTAG00000020174	HBS1L	100	72.134	Bos_taurus
ENSIPUG00000010748	hbs1l	72	45.363	WBGene00010622	K07A12.4	87	43.590	Caenorhabditis_elegans
ENSIPUG00000010748	hbs1l	100	73.004	ENSCJAG00000007678	HBS1L	95	79.630	Callithrix_jacchus
ENSIPUG00000010748	hbs1l	100	71.221	ENSCAFG00000000226	HBS1L	100	71.221	Canis_familiaris
ENSIPUG00000010748	hbs1l	100	71.221	ENSCAFG00020021904	HBS1L	100	71.221	Canis_lupus_dingo
ENSIPUG00000010748	hbs1l	100	71.635	ENSCHIG00000010299	HBS1L	100	71.635	Capra_hircus
ENSIPUG00000010748	hbs1l	100	71.346	ENSTSYG00000007089	HBS1L	100	71.346	Carlito_syrichta
ENSIPUG00000010748	hbs1l	99	64.000	ENSCPOG00000007015	HBS1L	99	64.148	Cavia_porcellus
ENSIPUG00000010748	hbs1l	100	71.346	ENSCCAG00000033863	HBS1L	100	73.579	Cebus_capucinus
ENSIPUG00000010748	hbs1l	100	72.569	ENSCATG00000043042	HBS1L	100	72.569	Cercocebus_atys
ENSIPUG00000010748	hbs1l	100	70.972	ENSCLAG00000004937	HBS1L	100	70.972	Chinchilla_lanigera
ENSIPUG00000010748	hbs1l	99	72.263	ENSCSAG00000016791	HBS1L	99	72.263	Chlorocebus_sabaeus
ENSIPUG00000010748	hbs1l	97	57.164	ENSCHOG00000001852	HBS1L	99	57.164	Choloepus_hoffmanni
ENSIPUG00000010748	hbs1l	100	72.319	ENSCPBG00000017635	HBS1L	100	72.319	Chrysemys_picta_bellii
ENSIPUG00000010748	hbs1l	99	47.339	ENSCING00000005592	-	99	47.172	Ciona_intestinalis
ENSIPUG00000010748	hbs1l	92	59.442	ENSCSAVG00000002297	-	99	59.442	Ciona_savignyi
ENSIPUG00000010748	hbs1l	100	72.093	ENSCANG00000031208	HBS1L	94	79.630	Colobus_angolensis_palliatus
ENSIPUG00000010748	hbs1l	100	71.965	ENSCGRG00001024531	Hbs1l	100	71.965	Cricetulus_griseus_chok1gshd
ENSIPUG00000010748	hbs1l	100	71.965	ENSCGRG00000017361	Hbs1l	100	71.965	Cricetulus_griseus_crigri
ENSIPUG00000010748	hbs1l	99	77.682	ENSCSEG00000002794	hbs1l	94	78.571	Cynoglossus_semilaevis
ENSIPUG00000010748	hbs1l	100	75.142	ENSCVAG00000001462	hbs1l	100	75.710	Cyprinodon_variegatus
ENSIPUG00000010748	hbs1l	100	85.924	ENSDARG00000036778	hbs1l	100	85.924	Danio_rerio
ENSIPUG00000010748	hbs1l	100	71.720	ENSDORG00000005958	Hbs1l	100	71.574	Dipodomys_ordii
ENSIPUG00000010748	hbs1l	99	47.110	FBgn0042712	HBS1	100	47.445	Drosophila_melanogaster
ENSIPUG00000010748	hbs1l	100	67.199	ENSETEG00000000913	HBS1L	100	67.199	Echinops_telfairi
ENSIPUG00000010748	hbs1l	99	60.090	ENSEBUG00000010759	hbs1l	100	64.824	Eptatretus_burgeri
ENSIPUG00000010748	hbs1l	100	72.399	ENSEASG00005011148	HBS1L	100	72.399	Equus_asinus_asinus
ENSIPUG00000010748	hbs1l	100	71.965	ENSECAG00000004470	HBS1L	100	72.110	Equus_caballus
ENSIPUG00000010748	hbs1l	100	66.474	ENSEEUG00000013582	HBS1L	100	65.945	Erinaceus_europaeus
ENSIPUG00000010748	hbs1l	93	66.775	ENSELUG00000006444	hbs1l	96	62.903	Esox_lucius
ENSIPUG00000010748	hbs1l	100	71.948	ENSFCAG00000001810	HBS1L	100	79.231	Felis_catus
ENSIPUG00000010748	hbs1l	86	72.910	ENSFALG00000011898	HBS1L	100	72.910	Ficedula_albicollis
ENSIPUG00000010748	hbs1l	100	71.263	ENSFDAG00000011841	HBS1L	100	71.263	Fukomys_damarensis
ENSIPUG00000010748	hbs1l	100	75.710	ENSFHEG00000006942	hbs1l	100	75.852	Fundulus_heteroclitus
ENSIPUG00000010748	hbs1l	99	78.382	ENSGMOG00000011843	hbs1l	100	78.382	Gadus_morhua
ENSIPUG00000010748	hbs1l	100	72.583	ENSGALG00000013962	HBS1L	100	72.583	Gallus_gallus
ENSIPUG00000010748	hbs1l	100	77.415	ENSGAFG00000004157	hbs1l	100	77.983	Gambusia_affinis
ENSIPUG00000010748	hbs1l	99	78.280	ENSGACG00000011035	hbs1l	100	78.280	Gasterosteus_aculeatus
ENSIPUG00000010748	hbs1l	100	71.780	ENSGAGG00000002033	HBS1L	100	71.780	Gopherus_agassizii
ENSIPUG00000010748	hbs1l	79	73.063	ENSGGOG00000034956	-	93	82.796	Gorilla_gorilla
ENSIPUG00000010748	hbs1l	100	77.890	ENSHBUG00000013424	hbs1l	100	78.468	Haplochromis_burtoni
ENSIPUG00000010748	hbs1l	100	71.076	ENSHGLG00000000516	HBS1L	100	71.076	Heterocephalus_glaber_female
ENSIPUG00000010748	hbs1l	100	71.076	ENSHGLG00100003550	HBS1L	100	71.076	Heterocephalus_glaber_male
ENSIPUG00000010748	hbs1l	100	73.458	ENSHCOG00000007581	hbs1l	93	74.462	Hippocampus_comes
ENSIPUG00000010748	hbs1l	100	71.780	ENSSTOG00000007551	HBS1L	100	71.780	Ictidomys_tridecemlineatus
ENSIPUG00000010748	hbs1l	100	57.410	ENSJJAG00000012660	-	100	57.266	Jaculus_jaculus
ENSIPUG00000010748	hbs1l	99	69.320	ENSJJAG00000017024	-	97	69.030	Jaculus_jaculus
ENSIPUG00000010748	hbs1l	100	77.603	ENSKMAG00000012130	hbs1l	100	79.030	Kryptolebias_marmoratus
ENSIPUG00000010748	hbs1l	100	75.499	ENSLBEG00000002784	hbs1l	100	76.496	Labrus_bergylta
ENSIPUG00000010748	hbs1l	72	80.041	ENSLACG00000004528	HBS1L	99	80.041	Latimeria_chalumnae
ENSIPUG00000010748	hbs1l	97	82.176	ENSLOCG00000016221	hbs1l	100	75.634	Lepisosteus_oculatus
ENSIPUG00000010748	hbs1l	100	70.145	ENSLAFG00000007835	HBS1L	100	70.145	Loxodonta_africana
ENSIPUG00000010748	hbs1l	100	72.674	ENSMFAG00000003766	HBS1L	100	72.674	Macaca_fascicularis
ENSIPUG00000010748	hbs1l	100	68.905	ENSMMUG00000004802	HBS1L	98	77.574	Macaca_mulatta
ENSIPUG00000010748	hbs1l	100	72.674	ENSMNEG00000043942	HBS1L	100	72.674	Macaca_nemestrina
ENSIPUG00000010748	hbs1l	99	72.093	ENSMLEG00000043218	HBS1L	98	72.263	Mandrillus_leucophaeus
ENSIPUG00000010748	hbs1l	100	76.170	ENSMAMG00000016498	hbs1l	100	76.879	Mastacembelus_armatus
ENSIPUG00000010748	hbs1l	78	84.952	ENSMZEG00005024018	-	90	84.952	Maylandia_zebra
ENSIPUG00000010748	hbs1l	100	77.746	ENSMZEG00005015575	hbs1l	100	78.324	Maylandia_zebra
ENSIPUG00000010748	hbs1l	99	70.640	ENSMGAG00000013065	HBS1L	99	70.640	Meleagris_gallopavo
ENSIPUG00000010748	hbs1l	100	72.029	ENSMAUG00000001077	Hbs1l	100	72.029	Mesocricetus_auratus
ENSIPUG00000010748	hbs1l	100	60.606	ENSMICG00000030043	-	96	80.108	Microcebus_murinus
ENSIPUG00000010748	hbs1l	99	67.873	ENSMICG00000001533	-	99	67.873	Microcebus_murinus
ENSIPUG00000010748	hbs1l	100	72.046	ENSMOCG00000023038	Hbs1l	100	72.046	Microtus_ochrogaster
ENSIPUG00000010748	hbs1l	97	78.980	ENSMMOG00000015507	hbs1l	99	79.753	Mola_mola
ENSIPUG00000010748	hbs1l	100	71.679	ENSMODG00000017499	HBS1L	100	71.679	Monodelphis_domestica
ENSIPUG00000010748	hbs1l	100	78.440	ENSMALG00000010768	hbs1l	100	78.440	Monopterus_albus
ENSIPUG00000010748	hbs1l	100	71.614	MGP_CAROLIEiJ_G0015162	Hbs1l	100	71.079	Mus_caroli
ENSIPUG00000010748	hbs1l	100	72.134	ENSMUSG00000019977	Hbs1l	100	90.323	Mus_musculus
ENSIPUG00000010748	hbs1l	100	71.014	MGP_PahariEiJ_G0023782	Hbs1l	100	70.478	Mus_pahari
ENSIPUG00000010748	hbs1l	100	71.902	MGP_SPRETEiJ_G0015970	Hbs1l	100	71.367	Mus_spretus
ENSIPUG00000010748	hbs1l	100	72.029	ENSMPUG00000014810	HBS1L	100	72.029	Mustela_putorius_furo
ENSIPUG00000010748	hbs1l	100	71.056	ENSMLUG00000010618	HBS1L	100	71.056	Myotis_lucifugus
ENSIPUG00000010748	hbs1l	100	71.843	ENSNGAG00000015184	Hbs1l	100	71.843	Nannospalax_galili
ENSIPUG00000010748	hbs1l	100	77.457	ENSNBRG00000020095	hbs1l	100	78.035	Neolamprologus_brichardi
ENSIPUG00000010748	hbs1l	100	71.843	ENSNLEG00000014721	HBS1L	95	79.630	Nomascus_leucogenys
ENSIPUG00000010748	hbs1l	82	82.234	ENSMEUG00000003907	HBS1L	81	82.234	Notamacropus_eugenii
ENSIPUG00000010748	hbs1l	76	78.512	ENSOPRG00000013595	HBS1L	70	82.609	Ochotona_princeps
ENSIPUG00000010748	hbs1l	99	71.241	ENSODEG00000008959	HBS1L	100	71.471	Octodon_degus
ENSIPUG00000010748	hbs1l	100	77.601	ENSONIG00000000460	hbs1l	100	77.586	Oreochromis_niloticus
ENSIPUG00000010748	hbs1l	99	71.386	ENSOANG00000002684	-	99	71.386	Ornithorhynchus_anatinus
ENSIPUG00000010748	hbs1l	99	68.467	ENSOCUG00000011619	HBS1L	99	70.033	Oryctolagus_cuniculus
ENSIPUG00000010748	hbs1l	100	75.426	ENSORLG00000016559	hbs1l	100	75.284	Oryzias_latipes
ENSIPUG00000010748	hbs1l	100	74.574	ENSORLG00020003827	hbs1l	100	75.142	Oryzias_latipes_hni
ENSIPUG00000010748	hbs1l	100	74.432	ENSORLG00015023105	hbs1l	100	75.142	Oryzias_latipes_hsok
ENSIPUG00000010748	hbs1l	100	75.499	ENSOMEG00000016715	hbs1l	100	76.211	Oryzias_melastigma
ENSIPUG00000010748	hbs1l	100	72.110	ENSOGAG00000012604	HBS1L	100	72.110	Otolemur_garnettii
ENSIPUG00000010748	hbs1l	99	71.553	ENSOARG00000014798	-	99	71.553	Ovis_aries
ENSIPUG00000010748	hbs1l	100	71.346	ENSOARG00000005671	-	100	71.346	Ovis_aries
ENSIPUG00000010748	hbs1l	100	72.529	ENSPPAG00000029900	HBS1L	100	72.529	Pan_paniscus
ENSIPUG00000010748	hbs1l	100	71.948	ENSPPRG00000005285	HBS1L	100	71.948	Panthera_pardus
ENSIPUG00000010748	hbs1l	100	71.948	ENSPTIG00000015803	HBS1L	100	71.948	Panthera_tigris_altaica
ENSIPUG00000010748	hbs1l	100	72.529	ENSPTRG00000018630	HBS1L	100	72.529	Pan_troglodytes
ENSIPUG00000010748	hbs1l	100	72.384	ENSPANG00000007075	HBS1L	100	72.384	Papio_anubis
ENSIPUG00000010748	hbs1l	100	77.664	ENSPKIG00000023171	hbs1l	97	81.888	Paramormyrops_kingsleyae
ENSIPUG00000010748	hbs1l	87	70.134	ENSPSIG00000016467	HBS1L	97	70.134	Pelodiscus_sinensis
ENSIPUG00000010748	hbs1l	99	77.367	ENSPMGG00000018051	hbs1l	96	89.894	Periophthalmus_magnuspinnatus
ENSIPUG00000010748	hbs1l	100	72.029	ENSPEMG00000014369	Hbs1l	100	72.029	Peromyscus_maniculatus_bairdii
ENSIPUG00000010748	hbs1l	100	65.452	ENSPMAG00000002516	hbs1l	100	65.255	Petromyzon_marinus
ENSIPUG00000010748	hbs1l	100	77.054	ENSPFOG00000021764	hbs1l	100	77.904	Poecilia_formosa
ENSIPUG00000010748	hbs1l	100	77.415	ENSPLAG00000006193	hbs1l	100	78.267	Poecilia_latipinna
ENSIPUG00000010748	hbs1l	100	77.415	ENSPMEG00000000925	hbs1l	100	77.983	Poecilia_mexicana
ENSIPUG00000010748	hbs1l	100	76.562	ENSPREG00000011270	hbs1l	100	77.131	Poecilia_reticulata
ENSIPUG00000010748	hbs1l	100	71.657	ENSPPYG00000017027	HBS1L	100	71.657	Pongo_abelii
ENSIPUG00000010748	hbs1l	88	77.715	ENSPCAG00000007002	HBS1L	78	77.903	Procavia_capensis
ENSIPUG00000010748	hbs1l	84	76.806	ENSPVAG00000015229	HBS1L	84	77.419	Pteropus_vampyrus
ENSIPUG00000010748	hbs1l	100	77.601	ENSPNYG00000013360	hbs1l	100	78.179	Pundamilia_nyererei
ENSIPUG00000010748	hbs1l	100	90.909	ENSPNAG00000026721	hbs1l	100	90.909	Pygocentrus_nattereri
ENSIPUG00000010748	hbs1l	100	71.884	ENSRNOG00000014531	Hbs1l	100	71.346	Rattus_norvegicus
ENSIPUG00000010748	hbs1l	100	72.238	ENSRBIG00000004484	HBS1L	94	79.630	Rhinopithecus_bieti
ENSIPUG00000010748	hbs1l	100	72.093	ENSRROG00000026176	HBS1L	100	72.093	Rhinopithecus_roxellana
ENSIPUG00000010748	hbs1l	63	37.978	YKR084C	-	73	37.978	Saccharomyces_cerevisiae
ENSIPUG00000010748	hbs1l	100	64.296	ENSSBOG00000016930	-	98	77.660	Saimiri_boliviensis_boliviensis
ENSIPUG00000010748	hbs1l	100	72.938	ENSSBOG00000019696	-	95	79.630	Saimiri_boliviensis_boliviensis
ENSIPUG00000010748	hbs1l	100	72.157	ENSSHAG00000013509	HBS1L	100	72.157	Sarcophilus_harrisii
ENSIPUG00000010748	hbs1l	99	79.941	ENSSFOG00015017544	hbs1l	96	79.941	Scleropages_formosus
ENSIPUG00000010748	hbs1l	99	75.758	ENSSMAG00000010621	hbs1l	99	76.190	Scophthalmus_maximus
ENSIPUG00000010748	hbs1l	100	78.865	ENSSDUG00000012974	hbs1l	100	79.291	Seriola_dumerili
ENSIPUG00000010748	hbs1l	100	78.156	ENSSLDG00000004960	hbs1l	100	78.582	Seriola_lalandi_dorsalis
ENSIPUG00000010748	hbs1l	98	71.642	ENSSARG00000006747	HBS1L	100	70.790	Sorex_araneus
ENSIPUG00000010748	hbs1l	99	72.093	ENSSPUG00000012389	HBS1L	99	72.093	Sphenodon_punctatus
ENSIPUG00000010748	hbs1l	98	73.507	ENSSSCG00000004169	HBS1L	100	71.562	Sus_scrofa
ENSIPUG00000010748	hbs1l	99	72.424	ENSTGUG00000011507	HBS1L	99	72.424	Taeniopygia_guttata
ENSIPUG00000010748	hbs1l	99	76.301	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSIPUG00000010748	hbs1l	99	77.386	ENSTNIG00000016320	hbs1l	99	78.414	Tetraodon_nigroviridis
ENSIPUG00000010748	hbs1l	100	66.570	ENSTBEG00000009950	HBS1L	100	66.570	Tupaia_belangeri
ENSIPUG00000010748	hbs1l	99	71.387	ENSTTRG00000003715	HBS1L	99	71.387	Tursiops_truncatus
ENSIPUG00000010748	hbs1l	100	72.464	ENSUAMG00000001064	HBS1L	100	72.464	Ursus_americanus
ENSIPUG00000010748	hbs1l	100	72.319	ENSUMAG00000024395	HBS1L	100	77.390	Ursus_maritimus
ENSIPUG00000010748	hbs1l	87	78.464	ENSVPAG00000006280	HBS1L	86	80.357	Vicugna_pacos
ENSIPUG00000010748	hbs1l	100	71.366	ENSVVUG00000000295	HBS1L	100	71.366	Vulpes_vulpes
ENSIPUG00000010748	hbs1l	100	73.314	ENSXETG00000003726	hbs1l	100	73.314	Xenopus_tropicalis
ENSIPUG00000010748	hbs1l	99	79.148	ENSXCOG00000005323	hbs1l	100	79.736	Xiphophorus_couchianus
ENSIPUG00000010748	hbs1l	100	77.557	ENSXMAG00000004359	hbs1l	100	78.125	Xiphophorus_maculatus