EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000010756 (Gene tree)
Gene ID: 108278975
Gene Symbol: lars
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 24198 bases
Position: chr18:23861274-23885471
Accession: 108278975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000015829	tRNA-synt_1g	PF09334.11	4e-17	1	2
ENSIPUP00000015829	tRNA-synt_1g	PF09334.11	4e-17	2	2
ENSIPUP00000015944	tRNA-synt_1g	PF09334.11	4.1e-17	1	2
ENSIPUP00000015944	tRNA-synt_1g	PF09334.11	4.1e-17	2	2
ENSIPUP00000015881	tRNA-synt_1g	PF09334.11	4.2e-17	1	2
ENSIPUP00000015881	tRNA-synt_1g	PF09334.11	4.2e-17	2	2
ENSIPUP00000016008	tRNA-synt_1g	PF09334.11	1.2e-10	1	1
ENSIPUP00000015829	Anticodon_1	PF08264.13	6.9e-16	1	1
ENSIPUP00000015944	Anticodon_1	PF08264.13	7.1e-16	1	1
ENSIPUP00000015881	Anticodon_1	PF08264.13	7.2e-16	1	1
ENSIPUP00000016008	Anticodon_1	PF08264.13	7.9e-16	1	1
ENSIPUP00000015829	tRNA-synt_1	PF00133.22	7.5e-40	1	2
ENSIPUP00000015829	tRNA-synt_1	PF00133.22	7.5e-40	2	2
ENSIPUP00000015944	tRNA-synt_1	PF00133.22	7.8e-40	1	2
ENSIPUP00000015944	tRNA-synt_1	PF00133.22	7.8e-40	2	2
ENSIPUP00000015881	tRNA-synt_1	PF00133.22	8e-40	1	2
ENSIPUP00000015881	tRNA-synt_1	PF00133.22	8e-40	2	2
ENSIPUP00000016008	tRNA-synt_1	PF00133.22	4.2e-37	1	2
ENSIPUP00000016008	tRNA-synt_1	PF00133.22	4.2e-37	2	2
ENSIPUP00000015829	tRNA-synt_1e	PF01406.19	5.8e-06	1	1
ENSIPUP00000015944	tRNA-synt_1e	PF01406.19	5.9e-06	1	1
ENSIPUP00000015881	tRNA-synt_1e	PF01406.19	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000016689	-	3474	-	ENSIPUP00000016008	1157 (aa)	-	-
ENSIPUT00000016622	-	5056	-	ENSIPUP00000015944	1170 (aa)	-	-
ENSIPUT00000016503	-	3587	-	ENSIPUP00000015829	1156 (aa)	-	-
ENSIPUT00000016556	-	5544	XM_017492815	ENSIPUP00000015881	1176 (aa)	XP_017348304	A0A2D0T060

Gene Model

Click here to download ENSIPUG00000010756's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010756	lars	100	80.294	ENSG00000133706	LARS	99	80.660	Homo_sapiens
ENSIPUG00000010756	lars	100	85.935	ENSAPOG00000010585	larsb	100	86.339	Acanthochromis_polyacanthus
ENSIPUG00000010756	lars	99	80.709	ENSAMEG00000017584	LARS	99	80.187	Ailuropoda_melanoleuca
ENSIPUG00000010756	lars	100	83.907	ENSACIG00000014026	larsb	99	83.658	Amphilophus_citrinellus
ENSIPUG00000010756	lars	100	86.009	ENSAOCG00000016931	larsb	100	85.654	Amphiprion_ocellaris
ENSIPUG00000010756	lars	100	86.094	ENSAPEG00000017720	larsb	100	85.738	Amphiprion_percula
ENSIPUG00000010756	lars	100	81.967	ENSATEG00000010441	larsb	99	81.919	Anabas_testudineus
ENSIPUG00000010756	lars	97	79.570	ENSAPLG00000008145	LARS	99	79.207	Anas_platyrhynchos
ENSIPUG00000010756	lars	100	77.787	ENSACAG00000013916	LARS	99	77.976	Anolis_carolinensis
ENSIPUG00000010756	lars	100	72.145	ENSANAG00000014375	LARS	99	71.830	Aotus_nancymaae
ENSIPUG00000010756	lars	100	86.094	ENSACLG00000010881	larsb	99	85.895	Astatotilapia_calliptera
ENSIPUG00000010756	lars	100	89.119	ENSAMXG00000019979	larsb	100	88.710	Astyanax_mexicanus
ENSIPUG00000010756	lars	100	79.257	ENSBTAG00000006765	LARS	99	78.876	Bos_taurus
ENSIPUG00000010756	lars	99	55.622	WBGene00003073	lars-1	99	55.236	Caenorhabditis_elegans
ENSIPUG00000010756	lars	100	80.467	ENSCJAG00000021314	LARS	99	80.838	Callithrix_jacchus
ENSIPUG00000010756	lars	100	80.553	ENSCAFG00000006431	LARS	99	80.102	Canis_familiaris
ENSIPUG00000010756	lars	99	80.676	ENSCAFG00020025009	LARS	99	80.153	Canis_lupus_dingo
ENSIPUG00000010756	lars	100	79.516	ENSCHIG00000014949	LARS	99	79.082	Capra_hircus
ENSIPUG00000010756	lars	100	79.602	ENSTSYG00000001253	LARS	99	79.167	Carlito_syrichta
ENSIPUG00000010756	lars	96	62.422	ENSCAPG00000015676	LARS	97	62.434	Cavia_aperea
ENSIPUG00000010756	lars	100	78.287	ENSCPOG00000012329	LARS	99	77.872	Cavia_porcellus
ENSIPUG00000010756	lars	100	81.331	ENSCCAG00000020789	LARS	99	80.920	Cebus_capucinus
ENSIPUG00000010756	lars	97	80.553	ENSCATG00000033463	LARS	99	80.392	Cercocebus_atys
ENSIPUG00000010756	lars	100	79.430	ENSCLAG00000011193	LARS	99	78.997	Chinchilla_lanigera
ENSIPUG00000010756	lars	100	80.121	ENSCSAG00000012280	LARS	97	79.897	Chlorocebus_sabaeus
ENSIPUG00000010756	lars	89	74.214	ENSCHOG00000009309	LARS	85	76.838	Choloepus_hoffmanni
ENSIPUG00000010756	lars	99	80.173	ENSCPBG00000008415	LARS	99	80.578	Chrysemys_picta_bellii
ENSIPUG00000010756	lars	99	64.940	ENSCING00000008535	-	98	64.853	Ciona_intestinalis
ENSIPUG00000010756	lars	99	64.280	ENSCSAVG00000009040	-	100	68.365	Ciona_savignyi
ENSIPUG00000010756	lars	100	80.207	ENSCANG00000031137	LARS	99	79.813	Colobus_angolensis_palliatus
ENSIPUG00000010756	lars	93	74.464	ENSCGRG00001004647	Lars	99	74.176	Cricetulus_griseus_chok1gshd
ENSIPUG00000010756	lars	100	75.841	ENSCGRG00000007284	Lars	99	75.552	Cricetulus_griseus_crigri
ENSIPUG00000010756	lars	100	84.820	ENSCSEG00000014984	larsb	100	84.570	Cynoglossus_semilaevis
ENSIPUG00000010756	lars	100	85.985	ENSCVAG00000014685	larsb	100	86.137	Cyprinodon_variegatus
ENSIPUG00000010756	lars	68	87.109	ENSDARG00000019280	larsb	100	87.109	Danio_rerio
ENSIPUG00000010756	lars	97	78.571	ENSDNOG00000017963	LARS	99	78.490	Dasypus_novemcinctus
ENSIPUG00000010756	lars	100	75.496	ENSDORG00000014913	Lars	99	75.233	Dipodomys_ordii
ENSIPUG00000010756	lars	99	58.919	FBgn0284253	LeuRS	99	58.432	Drosophila_melanogaster
ENSIPUG00000010756	lars	96	63.866	ENSETEG00000003145	LARS	95	75.000	Echinops_telfairi
ENSIPUG00000010756	lars	94	60.331	ENSEBUG00000014985	larsb	97	60.331	Eptatretus_burgeri
ENSIPUG00000010756	lars	100	80.467	ENSEASG00005020569	LARS	99	80.591	Equus_asinus_asinus
ENSIPUG00000010756	lars	100	80.467	ENSECAG00000008963	LARS	99	80.838	Equus_caballus
ENSIPUG00000010756	lars	92	64.216	ENSEEUG00000014854	LARS	92	64.216	Erinaceus_europaeus
ENSIPUG00000010756	lars	100	84.715	ENSELUG00000023311	larsb	100	84.211	Esox_lucius
ENSIPUG00000010756	lars	99	80.763	ENSFCAG00000008715	LARS	100	81.638	Felis_catus
ENSIPUG00000010756	lars	100	79.430	ENSFALG00000003209	LARS	93	79.082	Ficedula_albicollis
ENSIPUG00000010756	lars	100	78.911	ENSFDAG00000020764	LARS	99	78.486	Fukomys_damarensis
ENSIPUG00000010756	lars	91	85.635	ENSFHEG00000010437	larsb	100	85.773	Fundulus_heteroclitus
ENSIPUG00000010756	lars	99	82.800	ENSGMOG00000013645	larsb	99	82.498	Gadus_morhua
ENSIPUG00000010756	lars	100	79.775	ENSGALG00000007494	LARS	99	79.337	Gallus_gallus
ENSIPUG00000010756	lars	100	85.236	ENSGAFG00000005029	larsb	100	85.316	Gambusia_affinis
ENSIPUG00000010756	lars	99	84.356	ENSGACG00000020720	larsb	99	84.184	Gasterosteus_aculeatus
ENSIPUG00000010756	lars	99	79.307	ENSGAGG00000002353	LARS	99	79.216	Gopherus_agassizii
ENSIPUG00000010756	lars	100	80.294	ENSGGOG00000004103	LARS	99	79.898	Gorilla_gorilla
ENSIPUG00000010756	lars	99	84.922	ENSHBUG00000003051	larsb	100	86.491	Haplochromis_burtoni
ENSIPUG00000010756	lars	100	79.343	ENSHGLG00000006937	LARS	99	78.827	Heterocephalus_glaber_female
ENSIPUG00000010756	lars	100	79.343	ENSHGLG00100002801	LARS	99	78.827	Heterocephalus_glaber_male
ENSIPUG00000010756	lars	100	83.948	ENSHCOG00000003651	larsb	100	83.361	Hippocampus_comes
ENSIPUG00000010756	lars	100	79.516	ENSSTOG00000002356	LARS	99	79.082	Ictidomys_tridecemlineatus
ENSIPUG00000010756	lars	100	79.170	ENSJJAG00000015265	Lars	99	78.827	Jaculus_jaculus
ENSIPUG00000010756	lars	100	86.009	ENSKMAG00000009903	larsb	99	85.811	Kryptolebias_marmoratus
ENSIPUG00000010756	lars	100	85.322	ENSLBEG00000025237	larsb	100	85.063	Labrus_bergylta
ENSIPUG00000010756	lars	100	79.534	ENSLACG00000009321	LARS	99	79.609	Latimeria_chalumnae
ENSIPUG00000010756	lars	100	82.556	ENSLOCG00000010442	larsb	99	81.973	Lepisosteus_oculatus
ENSIPUG00000010756	lars	99	79.257	ENSLAFG00000000318	LARS	99	78.809	Loxodonta_africana
ENSIPUG00000010756	lars	100	80.207	ENSMFAG00000038685	LARS	99	80.277	Macaca_fascicularis
ENSIPUG00000010756	lars	100	80.035	ENSMMUG00000029787	LARS	99	79.592	Macaca_mulatta
ENSIPUG00000010756	lars	99	78.825	ENSMNEG00000044014	LARS	99	78.825	Macaca_nemestrina
ENSIPUG00000010756	lars	99	80.329	ENSMLEG00000037563	LARS	99	79.813	Mandrillus_leucophaeus
ENSIPUG00000010756	lars	100	85.751	ENSMAMG00000021385	larsb	99	85.389	Mastacembelus_armatus
ENSIPUG00000010756	lars	100	86.094	ENSMZEG00005002662	larsb	99	85.934	Maylandia_zebra
ENSIPUG00000010756	lars	97	80.914	ENSMGAG00000009388	LARS	99	80.352	Meleagris_gallopavo
ENSIPUG00000010756	lars	99	68.718	ENSMAUG00000003063	Lars	99	68.484	Mesocricetus_auratus
ENSIPUG00000010756	lars	100	65.860	ENSMICG00000035435	-	99	65.646	Microcebus_murinus
ENSIPUG00000010756	lars	100	80.294	ENSMICG00000035589	-	99	79.898	Microcebus_murinus
ENSIPUG00000010756	lars	100	78.602	ENSMOCG00000002092	Lars	99	78.268	Microtus_ochrogaster
ENSIPUG00000010756	lars	100	82.571	ENSMMOG00000013802	larsb	100	82.443	Mola_mola
ENSIPUG00000010756	lars	99	74.177	ENSMODG00000010231	LARS	99	73.935	Monodelphis_domestica
ENSIPUG00000010756	lars	99	83.588	ENSMALG00000018444	larsb	99	83.333	Monopterus_albus
ENSIPUG00000010756	lars	100	78.257	MGP_CAROLIEiJ_G0022225	Lars	99	77.929	Mus_caroli
ENSIPUG00000010756	lars	100	77.998	ENSMUSG00000024493	Lars	99	77.674	Mus_musculus
ENSIPUG00000010756	lars	100	77.998	MGP_PahariEiJ_G0018958	Lars	99	77.674	Mus_pahari
ENSIPUG00000010756	lars	100	77.998	MGP_SPRETEiJ_G0023135	Lars	99	77.674	Mus_spretus
ENSIPUG00000010756	lars	100	80.553	ENSMPUG00000007844	LARS	99	80.187	Mustela_putorius_furo
ENSIPUG00000010756	lars	99	79.585	ENSMLUG00000001125	LARS	99	79.234	Myotis_lucifugus
ENSIPUG00000010756	lars	100	77.787	ENSNGAG00000011596	Lars	99	77.296	Nannospalax_galili
ENSIPUG00000010756	lars	100	85.837	ENSNBRG00000005764	larsb	99	85.678	Neolamprologus_brichardi
ENSIPUG00000010756	lars	99	79.723	ENSNLEG00000009816	LARS	99	79.216	Nomascus_leucogenys
ENSIPUG00000010756	lars	51	80.309	ENSMEUG00000002332	-	58	80.309	Notamacropus_eugenii
ENSIPUG00000010756	lars	78	85.561	ENSOPRG00000003076	LARS	83	83.422	Ochotona_princeps
ENSIPUG00000010756	lars	99	76.776	ENSODEG00000004882	LARS	99	76.320	Octodon_degus
ENSIPUG00000010756	lars	100	86.180	ENSONIG00000008493	larsb	99	85.895	Oreochromis_niloticus
ENSIPUG00000010756	lars	100	76.976	ENSOANG00000005755	LARS	99	76.585	Ornithorhynchus_anatinus
ENSIPUG00000010756	lars	100	79.948	ENSOCUG00000015684	LARS	99	79.507	Oryctolagus_cuniculus
ENSIPUG00000010756	lars	100	85.494	ENSORLG00000001622	larsb	99	85.304	Oryzias_latipes
ENSIPUG00000010756	lars	100	85.579	ENSORLG00020019950	larsb	99	85.813	Oryzias_latipes_hni
ENSIPUG00000010756	lars	100	85.579	ENSORLG00015003895	larsb	99	85.473	Oryzias_latipes_hsok
ENSIPUG00000010756	lars	100	85.579	ENSOMEG00000005677	larsb	99	85.469	Oryzias_melastigma
ENSIPUG00000010756	lars	97	78.025	ENSOGAG00000008750	LARS	99	77.515	Otolemur_garnettii
ENSIPUG00000010756	lars	100	79.257	ENSOARG00000015911	-	99	78.827	Ovis_aries
ENSIPUG00000010756	lars	99	79.394	ENSOARG00000002454	-	99	78.894	Ovis_aries
ENSIPUG00000010756	lars	99	80.416	ENSPPAG00000027964	LARS	99	79.983	Pan_paniscus
ENSIPUG00000010756	lars	100	80.812	ENSPPRG00000023492	LARS	99	80.442	Panthera_pardus
ENSIPUG00000010756	lars	100	80.812	ENSPTIG00000013110	LARS	99	80.442	Panthera_tigris_altaica
ENSIPUG00000010756	lars	100	80.207	ENSPTRG00000017372	LARS	99	79.898	Pan_troglodytes
ENSIPUG00000010756	lars	100	80.121	ENSPANG00000002663	LARS	99	79.727	Papio_anubis
ENSIPUG00000010756	lars	99	83.854	ENSPKIG00000006650	larsb	99	81.919	Paramormyrops_kingsleyae
ENSIPUG00000010756	lars	99	79.827	ENSPSIG00000015641	LARS	99	79.472	Pelodiscus_sinensis
ENSIPUG00000010756	lars	68	87.000	ENSPMGG00000019556	LARS	100	87.000	Periophthalmus_magnuspinnatus
ENSIPUG00000010756	lars	100	74.547	ENSPEMG00000010933	Lars	99	74.278	Peromyscus_maniculatus_bairdii
ENSIPUG00000010756	lars	51	61.157	ENSPMAG00000005301	larsb	99	61.157	Petromyzon_marinus
ENSIPUG00000010756	lars	100	78.392	ENSPCIG00000030572	LARS	99	77.891	Phascolarctos_cinereus
ENSIPUG00000010756	lars	100	85.494	ENSPFOG00000002361	larsb	100	85.570	Poecilia_formosa
ENSIPUG00000010756	lars	100	85.579	ENSPLAG00000016550	larsb	100	85.654	Poecilia_latipinna
ENSIPUG00000010756	lars	100	85.322	ENSPMEG00000018422	larsb	100	85.401	Poecilia_mexicana
ENSIPUG00000010756	lars	100	84.893	ENSPREG00000005668	larsb	100	85.063	Poecilia_reticulata
ENSIPUG00000010756	lars	100	78.479	ENSPPYG00000015908	LARS	97	78.128	Pongo_abelii
ENSIPUG00000010756	lars	96	63.020	ENSPCAG00000005621	LARS	100	63.020	Procavia_capensis
ENSIPUG00000010756	lars	100	78.825	ENSPCOG00000019325	LARS	99	79.671	Propithecus_coquereli
ENSIPUG00000010756	lars	96	71.799	ENSPVAG00000011237	LARS	99	71.655	Pteropus_vampyrus
ENSIPUG00000010756	lars	100	85.923	ENSPNYG00000015254	larsb	99	85.811	Pundamilia_nyererei
ENSIPUG00000010756	lars	100	88.083	ENSPNAG00000027191	larsb	100	87.267	Pygocentrus_nattereri
ENSIPUG00000010756	lars	100	77.653	ENSRNOG00000018304	Lars	99	77.334	Rattus_norvegicus
ENSIPUG00000010756	lars	96	78.771	ENSRBIG00000043198	LARS	99	78.771	Rhinopithecus_bieti
ENSIPUG00000010756	lars	92	46.105	YPL160W	CDC60	99	46.147	Saccharomyces_cerevisiae
ENSIPUG00000010756	lars	99	78.664	ENSSBOG00000026661	LARS	99	81.176	Saimiri_boliviensis_boliviensis
ENSIPUG00000010756	lars	100	79.706	ENSSHAG00000006084	LARS	99	79.184	Sarcophilus_harrisii
ENSIPUG00000010756	lars	98	84.581	ENSSFOG00015018117	larsb	90	84.229	Scleropages_formosus
ENSIPUG00000010756	lars	89	85.810	ENSSMAG00000004078	larsb	97	85.810	Scophthalmus_maximus
ENSIPUG00000010756	lars	100	85.751	ENSSDUG00000021142	larsb	99	85.389	Seriola_dumerili
ENSIPUG00000010756	lars	100	85.837	ENSSLDG00000007054	larsb	99	85.473	Seriola_lalandi_dorsalis
ENSIPUG00000010756	lars	85	70.714	ENSSARG00000013481	LARS	83	75.862	Sorex_araneus
ENSIPUG00000010756	lars	100	79.534	ENSSPUG00000013805	LARS	99	79.779	Sphenodon_punctatus
ENSIPUG00000010756	lars	100	86.438	ENSSPAG00000012124	larsb	100	86.076	Stegastes_partitus
ENSIPUG00000010756	lars	100	76.577	ENSSSCG00000014411	LARS	99	76.195	Sus_scrofa
ENSIPUG00000010756	lars	99	79.654	ENSTGUG00000000092	-	99	79.302	Taeniopygia_guttata
ENSIPUG00000010756	lars	100	83.433	ENSTRUG00000005358	larsb	100	82.954	Takifugu_rubripes
ENSIPUG00000010756	lars	99	80.517	ENSTNIG00000018214	larsb	100	80.424	Tetraodon_nigroviridis
ENSIPUG00000010756	lars	91	80.567	ENSTBEG00000003757	LARS	94	80.567	Tupaia_belangeri
ENSIPUG00000010756	lars	96	77.578	ENSTTRG00000016712	LARS	96	77.160	Tursiops_truncatus
ENSIPUG00000010756	lars	96	80.884	ENSUAMG00000019907	LARS	99	80.884	Ursus_americanus
ENSIPUG00000010756	lars	100	80.812	ENSUMAG00000010585	LARS	99	80.357	Ursus_maritimus
ENSIPUG00000010756	lars	92	79.167	ENSVPAG00000000557	LARS	92	78.487	Vicugna_pacos
ENSIPUG00000010756	lars	100	80.467	ENSVVUG00000021124	LARS	99	80.017	Vulpes_vulpes
ENSIPUG00000010756	lars	100	80.743	ENSXETG00000002320	lars	100	80.390	Xenopus_tropicalis
ENSIPUG00000010756	lars	100	84.807	ENSXMAG00000001454	larsb	100	84.979	Xiphophorus_maculatus