EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000010791 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
8315 bases
Position
chr24:18641984-18650298
Accession
108257311
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000015903PABPPF00658.181.6e-3111
ENSIPUP00000015903RRM_5PF13893.65e-0912
ENSIPUP00000015903RRM_5PF13893.65e-0922
ENSIPUP00000015903RRM_1PF00076.223.6e-9014
ENSIPUP00000015903RRM_1PF00076.223.6e-9024
ENSIPUP00000015903RRM_1PF00076.223.6e-9034
ENSIPUP00000015903RRM_1PF00076.223.6e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000016577-1803XM_017454972ENSIPUP00000015903600 (aa)XP_017310461-
Gene Model
Click here to download ENSIPUG00000010791's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010791's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000010791-9774.277ENSIPUG00000016620pabpc49874.322
ENSIPUG00000010791-6160.000ENSIPUG00000006780-9460.000
ENSIPUG00000010791-7358.542ENSIPUG00000021244-5958.542
ENSIPUG00000010791-6163.793ENSIPUG00000006760-8863.793
ENSIPUG00000010791-6231.169ENSIPUG00000015781elavl1b8831.169
ENSIPUG00000010791-7348.958ENSIPUG00000024284-9548.958
ENSIPUG00000010791-7358.209ENSIPUG00000018724-7158.209
ENSIPUG00000010791-10084.069ENSIPUG00000008848pabpc1a10084.543
ENSIPUG00000010791-5659.091ENSIPUG00000020086-8659.091
ENSIPUG00000010791-5435.227ENSIPUG00000008622celf25036.905
ENSIPUG00000010791-7249.306ENSIPUG00000019895-6049.306
ENSIPUG00000010791-5370.248ENSIPUG00000024435-8570.248
ENSIPUG00000010791-7130.000ENSIPUG00000016702tia19130.000
ENSIPUG00000010791-6334.737ENSIPUG00000021323RBMS25134.737
ENSIPUG00000010791-5740.964ENSIPUG00000000913celf55940.964
ENSIPUG00000010791-6236.145ENSIPUG00000001381elavl48136.145
ENSIPUG00000010791-5463.077ENSIPUG00000005537-10063.077
ENSIPUG00000010791-5037.349ENSIPUG00000008218celf3a7037.349
ENSIPUG00000010791-9874.662ENSIPUG00000012602pabpc1l10074.662
ENSIPUG00000010791-6238.235ENSIPUG00000012337elavl27738.235
ENSIPUG00000010791-5039.759ENSIPUG00000017915celf5b5437.634
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000010791-6179.592ENSG00000186288PABPC1L2A9879.592Homo_sapiens
ENSIPUG00000010791-6179.592ENSG00000184388PABPC1L2B9879.592Homo_sapiens
ENSIPUG00000010791-10089.968ENSAPOG00000017776pabpc1b10090.717Acanthochromis_polyacanthus
ENSIPUG00000010791-10084.458ENSAPOG00000015105pabpc1a10084.458Acanthochromis_polyacanthus
ENSIPUG00000010791-6179.592ENSAMEG00000019441-9879.592Ailuropoda_melanoleuca
ENSIPUG00000010791-10088.057ENSACIG00000018366pabpc1b10088.057Amphilophus_citrinellus
ENSIPUG00000010791-10084.301ENSACIG00000004685pabpc1a10084.301Amphilophus_citrinellus
ENSIPUG00000010791-10084.458ENSAOCG00000011656pabpc1a10084.615Amphiprion_ocellaris
ENSIPUG00000010791-10087.402ENSAOCG00000019839pabpc1b10087.087Amphiprion_ocellaris
ENSIPUG00000010791-10084.458ENSAPEG00000006963pabpc1a10084.615Amphiprion_percula
ENSIPUG00000010791-10087.402ENSAPEG00000010435pabpc1b10087.087Amphiprion_percula
ENSIPUG00000010791-10084.615ENSATEG00000024852pabpc1a10084.772Anabas_testudineus
ENSIPUG00000010791-10087.107ENSATEG00000012917pabpc1b10087.107Anabas_testudineus
ENSIPUG00000010791-6179.592ENSANAG00000019431-9879.592Aotus_nancymaae
ENSIPUG00000010791-6179.592ENSANAG00000019429-9879.592Aotus_nancymaae
ENSIPUG00000010791-10084.458ENSACLG00000009399pabpc1a10084.458Astatotilapia_calliptera
ENSIPUG00000010791-10086.614ENSACLG00000014335pabpc1b10086.614Astatotilapia_calliptera
ENSIPUG00000010791-10089.134ENSAMXG00000008599pabpc1b10088.976Astyanax_mexicanus
ENSIPUG00000010791-6376.555ENSBTAG00000052491-9876.555Bos_taurus
ENSIPUG00000010791-6378.537ENSBTAG00000050902-9878.537Bos_taurus
ENSIPUG00000010791-6179.592ENSCJAG00000041326-9879.592Callithrix_jacchus
ENSIPUG00000010791-6378.537ENSCAFG00020002052-9878.537Canis_lupus_dingo
ENSIPUG00000010791-6179.592ENSCHIG00000006283-9879.592Capra_hircus
ENSIPUG00000010791-6179.592ENSCHIG00000011138-9879.592Capra_hircus
ENSIPUG00000010791-6179.592ENSTSYG00000001775-9879.592Carlito_syrichta
ENSIPUG00000010791-6179.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSIPUG00000010791-6179.592ENSCCAG00000031524-9879.592Cebus_capucinus
ENSIPUG00000010791-6179.592ENSCATG00000043125-9879.592Cercocebus_atys
ENSIPUG00000010791-6179.592ENSCATG00000042826-9879.592Cercocebus_atys
ENSIPUG00000010791-6177.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSIPUG00000010791-6177.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSIPUG00000010791-6179.592ENSCSAG00000000102-9879.592Chlorocebus_sabaeus
ENSIPUG00000010791-6179.558ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSIPUG00000010791-10085.174ENSCSEG00000015241-10085.174Cynoglossus_semilaevis
ENSIPUG00000010791-9984.177ENSCSEG00000013324pabpc1a10084.335Cynoglossus_semilaevis
ENSIPUG00000010791-10084.748ENSCVAG00000005489pabpc1b10084.591Cyprinodon_variegatus
ENSIPUG00000010791-10084.301ENSCVAG00000021872pabpc1a10084.615Cyprinodon_variegatus
ENSIPUG00000010791-10088.189ENSDARG00000021140pabpc1b9993.617Danio_rerio
ENSIPUG00000010791-10084.748ENSDARG00000017219pabpc1a10085.220Danio_rerio
ENSIPUG00000010791-6179.894ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSIPUG00000010791-6177.041ENSDORG00000011362-9877.041Dipodomys_ordii
ENSIPUG00000010791-6378.155ENSEASG00005010399-9878.155Equus_asinus_asinus
ENSIPUG00000010791-6378.155ENSECAG00000002620-9878.155Equus_caballus
ENSIPUG00000010791-6375.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSIPUG00000010791-10086.499ENSELUG00000015062-10086.499Esox_lucius
ENSIPUG00000010791-9985.039ENSELUG00000003614pabpc1a10085.039Esox_lucius
ENSIPUG00000010791-6359.483ENSELUG00000005389-9759.483Esox_lucius
ENSIPUG00000010791-6179.592ENSFCAG00000039701-9879.592Felis_catus
ENSIPUG00000010791-6179.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSIPUG00000010791-10084.772ENSFHEG00000018979pabpc1a10084.615Fundulus_heteroclitus
ENSIPUG00000010791-10086.299ENSFHEG00000008186pabpc1b10086.457Fundulus_heteroclitus
ENSIPUG00000010791-10077.744ENSGMOG00000002448-10077.744Gadus_morhua
ENSIPUG00000010791-10082.844ENSGMOG00000013448pabpc1a10082.844Gadus_morhua
ENSIPUG00000010791-10087.849ENSGAFG00000010193pabpc1b10087.849Gambusia_affinis
ENSIPUG00000010791-10085.440ENSGAFG00000019750pabpc1a10085.440Gambusia_affinis
ENSIPUG00000010791-10084.458ENSGACG00000003572pabpc1a10084.458Gasterosteus_aculeatus
ENSIPUG00000010791-9986.612ENSGACG00000003771pabpc1b10086.612Gasterosteus_aculeatus
ENSIPUG00000010791-6179.592ENSGGOG00000038606-9879.592Gorilla_gorilla
ENSIPUG00000010791-6179.592ENSGGOG00000043933-9879.592Gorilla_gorilla
ENSIPUG00000010791-10088.493ENSHBUG00000002075pabpc1b10088.493Haplochromis_burtoni
ENSIPUG00000010791-10084.458ENSHBUG00000020487pabpc1a10084.458Haplochromis_burtoni
ENSIPUG00000010791-6178.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSIPUG00000010791-6178.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSIPUG00000010791-6178.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSIPUG00000010791-9871.429ENSHCOG00000003175pabpc1b9971.429Hippocampus_comes
ENSIPUG00000010791-10083.673ENSHCOG00000013502pabpc1a10083.830Hippocampus_comes
ENSIPUG00000010791-6179.082ENSSTOG00000026028-9879.082Ictidomys_tridecemlineatus
ENSIPUG00000010791-6179.082ENSSTOG00000022096-9879.082Ictidomys_tridecemlineatus
ENSIPUG00000010791-6178.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSIPUG00000010791-10084.615ENSKMAG00000000605pabpc1a10084.615Kryptolebias_marmoratus
ENSIPUG00000010791-10090.849ENSKMAG00000008049pabpc1b10090.849Kryptolebias_marmoratus
ENSIPUG00000010791-10084.772ENSLBEG00000024002-10084.772Labrus_bergylta
ENSIPUG00000010791-10086.593ENSLBEG00000026845pabpc1b10086.593Labrus_bergylta
ENSIPUG00000010791-6178.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSIPUG00000010791-6179.188ENSMFAG00000028878-9879.188Macaca_fascicularis
ENSIPUG00000010791-6179.592ENSMMUG00000039929-9879.592Macaca_mulatta
ENSIPUG00000010791-6179.592ENSMMUG00000009740-9879.592Macaca_mulatta
ENSIPUG00000010791-6179.592ENSMMUG00000037681-9879.592Macaca_mulatta
ENSIPUG00000010791-6179.592ENSMNEG00000037732-9879.592Macaca_nemestrina
ENSIPUG00000010791-6179.592ENSMLEG00000027495-9879.592Mandrillus_leucophaeus
ENSIPUG00000010791-10084.144ENSMAMG00000004502-10084.301Mastacembelus_armatus
ENSIPUG00000010791-10088.179ENSMAMG00000014610pabpc1b10088.179Mastacembelus_armatus
ENSIPUG00000010791-10086.614ENSMZEG00005026745pabpc1b10086.614Maylandia_zebra
ENSIPUG00000010791-10084.458ENSMZEG00005025416pabpc1a10084.458Maylandia_zebra
ENSIPUG00000010791-6179.592ENSMICG00000047642-9879.592Microcebus_murinus
ENSIPUG00000010791-10087.521ENSMMOG00000018044pabpc1a10087.521Mola_mola
ENSIPUG00000010791-10089.684ENSMMOG00000018009pabpc1b10089.684Mola_mola
ENSIPUG00000010791-9970.860ENSMODG00000013156-9970.860Monodelphis_domestica
ENSIPUG00000010791-9963.924ENSMODG00000015024-9963.924Monodelphis_domestica
ENSIPUG00000010791-10088.500ENSMALG00000013020-10088.500Monopterus_albus
ENSIPUG00000010791-10089.517ENSMALG00000006066pabpc1b10089.517Monopterus_albus
ENSIPUG00000010791-6181.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSIPUG00000010791-10089.850ENSNBRG00000013737pabpc1b10089.850Neolamprologus_brichardi
ENSIPUG00000010791-10084.458ENSNBRG00000003068-10084.458Neolamprologus_brichardi
ENSIPUG00000010791-6179.592ENSNLEG00000018128-9879.592Nomascus_leucogenys
ENSIPUG00000010791-6179.082ENSODEG00000018540-9879.082Octodon_degus
ENSIPUG00000010791-10084.144ENSONIG00000006871-10084.144Oreochromis_niloticus
ENSIPUG00000010791-10086.929ENSONIG00000002717pabpc1b10086.929Oreochromis_niloticus
ENSIPUG00000010791-6179.592ENSOCUG00000002565-9879.592Oryctolagus_cuniculus
ENSIPUG00000010791-10080.727ENSORLG00000003008-10080.727Oryzias_latipes
ENSIPUG00000010791-10083.830ENSORLG00000002691pabpc1a10083.987Oryzias_latipes
ENSIPUG00000010791-10080.727ENSORLG00020022259-10080.727Oryzias_latipes_hni
ENSIPUG00000010791-10083.830ENSORLG00020022398pabpc1a10083.987Oryzias_latipes_hni
ENSIPUG00000010791-10083.830ENSORLG00015013633pabpc110083.987Oryzias_latipes_hsok
ENSIPUG00000010791-10080.885ENSORLG00015010932-10080.885Oryzias_latipes_hsok
ENSIPUG00000010791-9977.083ENSOMEG00000013627pabpc1b10076.910Oryzias_melastigma
ENSIPUG00000010791-10083.987ENSOMEG00000020219pabpc1a10084.144Oryzias_melastigma
ENSIPUG00000010791-6179.592ENSOGAG00000026047-9879.592Otolemur_garnettii
ENSIPUG00000010791-6179.592ENSOGAG00000029513-9879.592Otolemur_garnettii
ENSIPUG00000010791-6179.592ENSOARG00000005943-9879.592Ovis_aries
ENSIPUG00000010791-6179.592ENSPPAG00000012920-9879.592Pan_paniscus
ENSIPUG00000010791-6179.592ENSPPRG00000011804-9879.592Panthera_pardus
ENSIPUG00000010791-6179.592ENSPPRG00000011809-9879.592Panthera_pardus
ENSIPUG00000010791-6179.592ENSPTRG00000028252-9879.592Pan_troglodytes
ENSIPUG00000010791-6179.592ENSPANG00000011549-9879.592Papio_anubis
ENSIPUG00000010791-10088.346ENSPKIG00000005676pabpc1b10088.031Paramormyrops_kingsleyae
ENSIPUG00000010791-7493.034ENSPMGG00000022487pabpc1a9293.034Periophthalmus_magnuspinnatus
ENSIPUG00000010791-7492.617ENSPMGG00000023134-9792.617Periophthalmus_magnuspinnatus
ENSIPUG00000010791-9969.453ENSPCIG00000016995-5569.453Phascolarctos_cinereus
ENSIPUG00000010791-10086.299ENSPFOG00000005917pabpc1b10086.457Poecilia_formosa
ENSIPUG00000010791-10083.513ENSPFOG00000010815pabpc1a10083.513Poecilia_formosa
ENSIPUG00000010791-10084.929ENSPLAG00000004114pabpc1a10085.086Poecilia_latipinna
ENSIPUG00000010791-10086.614ENSPLAG00000001388pabpc1b10086.772Poecilia_latipinna
ENSIPUG00000010791-10087.086ENSPMEG00000014399pabpc1b10087.086Poecilia_mexicana
ENSIPUG00000010791-10084.929ENSPMEG00000001334pabpc1a10085.086Poecilia_mexicana
ENSIPUG00000010791-10088.889ENSPREG00000019595pabpc1a10089.163Poecilia_reticulata
ENSIPUG00000010791-10087.685ENSPREG00000010911pabpc1b10087.685Poecilia_reticulata
ENSIPUG00000010791-6179.592ENSPPYG00000020468-9879.592Pongo_abelii
ENSIPUG00000010791-6379.592ENSPCAG00000005308-9879.592Procavia_capensis
ENSIPUG00000010791-6179.082ENSPCOG00000026349-9879.082Propithecus_coquereli
ENSIPUG00000010791-6380.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSIPUG00000010791-10088.493ENSPNYG00000012578pabpc1b10088.493Pundamilia_nyererei
ENSIPUG00000010791-9987.329ENSPNYG00000005192pabpc1a10087.329Pundamilia_nyererei
ENSIPUG00000010791-10086.333ENSPNAG00000028408pabpc1a10086.333Pygocentrus_nattereri
ENSIPUG00000010791-10088.976ENSPNAG00000024626pabpc1b10088.819Pygocentrus_nattereri
ENSIPUG00000010791-6179.592ENSRBIG00000027173-9879.592Rhinopithecus_bieti
ENSIPUG00000010791-9975.648ENSRBIG00000028738-9180.626Rhinopithecus_bieti
ENSIPUG00000010791-6179.592ENSRROG00000017404-9879.592Rhinopithecus_roxellana
ENSIPUG00000010791-9763.871ENSSHAG00000000511-10063.871Sarcophilus_harrisii
ENSIPUG00000010791-10084.567ENSSFOG00015006662pabpc1a10084.567Scleropages_formosus
ENSIPUG00000010791-7379.769ENSSFOG00015019668-8979.769Scleropages_formosus
ENSIPUG00000010791-10088.013ENSSFOG00015002752-10087.855Scleropages_formosus
ENSIPUG00000010791-10086.457ENSSMAG00000006869pabpc1b10086.457Scophthalmus_maximus
ENSIPUG00000010791-10084.144ENSSMAG00000010803pabpc1a10084.144Scophthalmus_maximus
ENSIPUG00000010791-10084.615ENSSDUG00000006675pabpc1a10084.772Seriola_dumerili
ENSIPUG00000010791-10087.441ENSSDUG00000011965pabpc1b10087.441Seriola_dumerili
ENSIPUG00000010791-10084.615ENSSLDG00000011661pabpc1a10084.772Seriola_lalandi_dorsalis
ENSIPUG00000010791-10087.480ENSSLDG00000014156pabpc1b10087.480Seriola_lalandi_dorsalis
ENSIPUG00000010791-10089.850ENSSPAG00000019265pabpc1b10089.850Stegastes_partitus
ENSIPUG00000010791-10084.301ENSSPAG00000014453-10084.458Stegastes_partitus
ENSIPUG00000010791-6179.592ENSSSCG00000036336-9879.592Sus_scrofa
ENSIPUG00000010791-6179.592ENSSSCG00000032167-9879.592Sus_scrofa
ENSIPUG00000010791-10085.008ENSTRUG00000003767-10085.327Takifugu_rubripes
ENSIPUG00000010791-10084.326ENSTRUG00000011577-10084.326Takifugu_rubripes
ENSIPUG00000010791-10081.607ENSTNIG00000013307pabpc1a10081.762Tetraodon_nigroviridis
ENSIPUG00000010791-10084.194ENSTNIG00000009153pabpc1b10084.194Tetraodon_nigroviridis
ENSIPUG00000010791-6179.592ENSTTRG00000013181-9879.592Tursiops_truncatus
ENSIPUG00000010791-6179.592ENSUAMG00000008089-9879.592Ursus_americanus
ENSIPUG00000010791-6179.592ENSUMAG00000003364-9879.592Ursus_maritimus
ENSIPUG00000010791-9654.257ENSUMAG00000023926-8967.680Ursus_maritimus
ENSIPUG00000010791-6278.500ENSVVUG00000015892-9778.500Vulpes_vulpes
ENSIPUG00000010791-9747.304ENSXETG00000015439-9747.304Xenopus_tropicalis
ENSIPUG00000010791-10087.356ENSXCOG00000019901pabpc1b10087.356Xiphophorus_couchianus
ENSIPUG00000010791-10089.867ENSXCOG00000017066pabpc1a10089.867Xiphophorus_couchianus
ENSIPUG00000010791-10088.725ENSXMAG00000002555pabpc1a10088.998Xiphophorus_maculatus
ENSIPUG00000010791-10086.457ENSXMAG00000003753pabpc1b9297.003Xiphophorus_maculatus

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