EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000010859 (Gene tree)
Gene ID: 108280497
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 11388 bases
Position: chr20:19736683-19748070
Accession: 108280497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000016038	MMR_HSR1	PF01926.23	1.9e-07	1	1
ENSIPUP00000016053	MMR_HSR1	PF01926.23	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000016757	-	546	-	ENSIPUP00000016074	181 (aa)	-	-
ENSIPUT00000016720	-	4769	XM_017495529	ENSIPUP00000016038	205 (aa)	XP_017351018	W5UGZ6
ENSIPUT00000016736	-	4702	-	ENSIPUP00000016053	193 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000010859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000010859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000010859	rab18b	80	39.412	ENSIPUG00000014035	rab9a	83	39.412
ENSIPUG00000010859	rab18b	73	42.384	ENSIPUG00000017684	rab33b	65	42.384
ENSIPUG00000010859	rab18b	80	37.725	ENSIPUG00000022445	RAB7A	81	37.725
ENSIPUG00000010859	rab18b	73	33.333	ENSIPUG00000017447	rab34a	59	33.333
ENSIPUG00000010859	rab18b	83	44.444	ENSIPUG00000021401	Rab11a	79	44.444
ENSIPUG00000010859	rab18b	80	46.951	ENSIPUG00000007415	rab14	76	46.951
ENSIPUG00000010859	rab18b	79	46.626	ENSIPUG00000003199	rab13	81	46.626
ENSIPUG00000010859	rab18b	81	33.133	ENSIPUG00000006053	hras	87	33.133
ENSIPUG00000010859	rab18b	97	39.024	ENSIPUG00000020082	rab5c	96	39.024
ENSIPUG00000010859	rab18b	83	39.306	ENSIPUG00000020833	rab39b	81	39.306
ENSIPUG00000010859	rab18b	77	51.266	ENSIPUG00000021010	Rab30	78	51.266
ENSIPUG00000010859	rab18b	85	39.205	ENSIPUG00000011376	rab42a	83	39.205
ENSIPUG00000010859	rab18b	82	35.882	ENSIPUG00000000962	MRAS	81	35.882
ENSIPUG00000010859	rab18b	78	37.037	ENSIPUG00000022673	rab36	62	37.037
ENSIPUG00000010859	rab18b	81	49.102	ENSIPUG00000017890	Rab1A	83	49.102
ENSIPUG00000010859	rab18b	93	39.583	ENSIPUG00000018050	RAB31	97	39.583
ENSIPUG00000010859	rab18b	91	40.957	ENSIPUG00000010794	rab22a	93	40.957
ENSIPUG00000010859	rab18b	75	36.364	ENSIPUG00000016494	rab23	74	36.364
ENSIPUG00000010859	rab18b	80	48.780	ENSIPUG00000011489	Rab35	81	48.780
ENSIPUG00000010859	rab18b	81	40.476	ENSIPUG00000016261	RAB19	75	40.476
ENSIPUG00000010859	rab18b	93	33.854	ENSIPUG00000016561	rab9b	88	33.854
ENSIPUG00000010859	rab18b	80	44.512	ENSIPUG00000006091	RAB11A	75	44.512
ENSIPUG00000010859	rab18b	79	48.171	ENSIPUG00000017401	rab12	67	48.171
ENSIPUG00000010859	rab18b	80	46.951	ENSIPUG00000015525	-	76	46.951
ENSIPUG00000010859	rab18b	99	38.806	ENSIPUG00000019927	rab11bb	78	45.029
ENSIPUG00000010859	rab18b	80	38.323	ENSIPUG00000007246	rab7a	81	38.323
ENSIPUG00000010859	rab18b	96	41.379	ENSIPUG00000020226	RAB15	97	41.379
ENSIPUG00000010859	rab18b	87	48.045	ENSIPUG00000024622	rab35	87	48.045
ENSIPUG00000010859	rab18b	79	31.928	ENSIPUG00000015086	dnajc27	61	31.928
ENSIPUG00000010859	rab18b	94	37.624	ENSIPUG00000021740	rab6a	94	37.624
ENSIPUG00000010859	rab18b	95	46.193	ENSIPUG00000008650	rab1a	96	46.193
ENSIPUG00000010859	rab18b	83	39.181	ENSIPUG00000019382	rab41	92	38.418
ENSIPUG00000010859	rab18b	82	35.882	ENSIPUG00000013954	rasm	82	35.882
ENSIPUG00000010859	rab18b	85	35.976	ENSIPUG00000024531	rab34	62	35.976
ENSIPUG00000010859	rab18b	94	39.899	ENSIPUG00000023392	rab5a	90	39.899
ENSIPUG00000010859	rab18b	96	37.186	ENSIPUG00000015058	rab6b	95	37.186
ENSIPUG00000010859	rab18b	81	33.133	ENSIPUG00000022502	hrasb	87	33.133
ENSIPUG00000010859	rab18b	79	38.788	ENSIPUG00000022394	zgc:101559	72	38.788
ENSIPUG00000010859	rab18b	85	39.548	ENSIPUG00000012509	-	79	39.548
ENSIPUG00000010859	rab18b	95	45.685	ENSIPUG00000020508	rab1ab	96	45.685
ENSIPUG00000010859	rab18b	79	43.827	ENSIPUG00000012218	RAB25	76	43.827
ENSIPUG00000010859	rab18b	81	33.133	ENSIPUG00000004259	kras	87	33.537
ENSIPUG00000010859	rab18b	99	38.806	ENSIPUG00000025100	rab11b	78	45.029
ENSIPUG00000010859	rab18b	80	38.824	ENSIPUG00000009784	-	77	38.824
ENSIPUG00000010859	rab18b	77	32.727	ENSIPUG00000024568	rheb	84	32.727
ENSIPUG00000010859	rab18b	80	37.725	ENSIPUG00000017200	-	81	37.725
ENSIPUG00000010859	rab18b	92	47.668	ENSIPUG00000007539	rab2a	92	47.208
ENSIPUG00000010859	rab18b	82	46.154	ENSIPUG00000019237	rab15	78	46.154
ENSIPUG00000010859	rab18b	67	30.827	ENSIPUG00000013834	arl1	67	30.827
ENSIPUG00000010859	rab18b	80	30.769	ENSIPUG00000005254	RERG	82	30.769
ENSIPUG00000010859	rab18b	83	40.351	ENSIPUG00000018098	rab6b	80	40.351
ENSIPUG00000010859	rab18b	73	34.000	ENSIPUG00000006702	rras	78	34.783
ENSIPUG00000010859	rab18b	79	43.210	ENSIPUG00000006126	Rab25	76	43.210
ENSIPUG00000010859	rab18b	83	38.728	ENSIPUG00000024203	rab39ba	81	38.728
ENSIPUG00000010859	rab18b	71	45.578	ENSIPUG00000014269	rab33a	64	45.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000010859	rab18b	100	84.466	ENSG00000099246	RAB18	100	92.188	Homo_sapiens
ENSIPUG00000010859	rab18b	99	84.314	ENSAPOG00000019881	rab18b	99	84.314	Acanthochromis_polyacanthus
ENSIPUG00000010859	rab18b	100	73.729	ENSAMEG00000015990	RAB18	100	73.729	Ailuropoda_melanoleuca
ENSIPUG00000010859	rab18b	99	85.294	ENSACIG00000008102	rab18b	99	85.294	Amphilophus_citrinellus
ENSIPUG00000010859	rab18b	99	84.314	ENSAOCG00000013479	rab18b	99	84.314	Amphiprion_ocellaris
ENSIPUG00000010859	rab18b	99	84.804	ENSAPEG00000022923	rab18b	99	84.804	Amphiprion_percula
ENSIPUG00000010859	rab18b	99	83.333	ENSATEG00000002952	rab18b	99	83.333	Anabas_testudineus
ENSIPUG00000010859	rab18b	100	84.466	ENSANAG00000035856	RAB18	100	84.466	Aotus_nancymaae
ENSIPUG00000010859	rab18b	99	85.294	ENSACLG00000015289	rab18b	99	85.294	Astatotilapia_calliptera
ENSIPUG00000010859	rab18b	100	92.683	ENSAMXG00000042073	rab18b	100	92.683	Astyanax_mexicanus
ENSIPUG00000010859	rab18b	100	84.466	ENSBTAG00000009871	RAB18	88	84.466	Bos_taurus
ENSIPUG00000010859	rab18b	100	82.524	ENSBTAG00000050873	-	100	82.524	Bos_taurus
ENSIPUG00000010859	rab18b	100	84.466	ENSCJAG00000045749	RAB18	100	84.466	Callithrix_jacchus
ENSIPUG00000010859	rab18b	100	84.466	ENSCAFG00020003253	RAB18	100	84.466	Canis_lupus_dingo
ENSIPUG00000010859	rab18b	100	84.466	ENSCHIG00000008749	RAB18	100	84.466	Capra_hircus
ENSIPUG00000010859	rab18b	100	84.951	ENSTSYG00000013092	RAB18	100	84.951	Carlito_syrichta
ENSIPUG00000010859	rab18b	100	84.951	ENSCPOG00000032827	RAB18	100	84.951	Cavia_porcellus
ENSIPUG00000010859	rab18b	100	84.466	ENSCCAG00000006762	RAB18	100	84.466	Cebus_capucinus
ENSIPUG00000010859	rab18b	100	84.466	ENSCATG00000009672	RAB18	100	84.466	Cercocebus_atys
ENSIPUG00000010859	rab18b	100	84.466	ENSCSAG00000011749	RAB18	100	84.466	Chlorocebus_sabaeus
ENSIPUG00000010859	rab18b	100	84.466	ENSCANG00000035397	RAB18	100	84.466	Colobus_angolensis_palliatus
ENSIPUG00000010859	rab18b	100	84.951	ENSCGRG00001017519	Rab18	100	84.951	Cricetulus_griseus_chok1gshd
ENSIPUG00000010859	rab18b	100	84.951	ENSCGRG00000017201	Rab18	100	84.951	Cricetulus_griseus_crigri
ENSIPUG00000010859	rab18b	93	85.864	ENSCSEG00000016803	rab18b	97	85.864	Cynoglossus_semilaevis
ENSIPUG00000010859	rab18b	100	91.220	ENSDARG00000098344	rab18b	100	91.220	Danio_rerio
ENSIPUG00000010859	rab18b	100	84.466	ENSDNOG00000047713	RAB18	100	84.466	Dasypus_novemcinctus
ENSIPUG00000010859	rab18b	59	91.150	ENSDNOG00000038845	-	75	91.150	Dasypus_novemcinctus
ENSIPUG00000010859	rab18b	85	83.333	ENSDORG00000029360	-	83	83.333	Dipodomys_ordii
ENSIPUG00000010859	rab18b	100	84.466	ENSDORG00000028596	-	100	84.466	Dipodomys_ordii
ENSIPUG00000010859	rab18b	100	84.951	ENSEASG00005007164	RAB18	100	84.951	Equus_asinus_asinus
ENSIPUG00000010859	rab18b	100	84.951	ENSECAG00000017521	RAB18	88	84.951	Equus_caballus
ENSIPUG00000010859	rab18b	99	88.780	ENSELUG00000016450	rab18b	99	88.780	Esox_lucius
ENSIPUG00000010859	rab18b	100	84.466	ENSFCAG00000027161	RAB18	100	84.466	Felis_catus
ENSIPUG00000010859	rab18b	93	87.435	ENSFALG00000007160	RAB18	100	84.541	Ficedula_albicollis
ENSIPUG00000010859	rab18b	99	83.824	ENSFHEG00000020035	rab18b	99	83.824	Fundulus_heteroclitus
ENSIPUG00000010859	rab18b	99	78.431	ENSGMOG00000016608	rab18b	99	78.431	Gadus_morhua
ENSIPUG00000010859	rab18b	100	85.437	ENSGALG00000007435	RAB18	100	85.437	Gallus_gallus
ENSIPUG00000010859	rab18b	99	84.314	ENSGAFG00000008560	rab18b	99	84.314	Gambusia_affinis
ENSIPUG00000010859	rab18b	99	82.843	ENSGACG00000016395	rab18b	99	82.843	Gasterosteus_aculeatus
ENSIPUG00000010859	rab18b	100	84.466	ENSGGOG00000008086	RAB18	100	84.466	Gorilla_gorilla
ENSIPUG00000010859	rab18b	99	85.294	ENSHBUG00000003696	rab18b	99	85.294	Haplochromis_burtoni
ENSIPUG00000010859	rab18b	100	84.951	ENSHGLG00000004365	RAB18	100	84.951	Heterocephalus_glaber_female
ENSIPUG00000010859	rab18b	99	73.039	ENSHGLG00000007301	-	95	73.039	Heterocephalus_glaber_female
ENSIPUG00000010859	rab18b	100	84.951	ENSHGLG00100013089	-	100	84.951	Heterocephalus_glaber_male
ENSIPUG00000010859	rab18b	99	73.039	ENSHGLG00100009117	-	95	73.039	Heterocephalus_glaber_male
ENSIPUG00000010859	rab18b	99	83.333	ENSHCOG00000002217	rab18b	99	83.333	Hippocampus_comes
ENSIPUG00000010859	rab18b	100	84.951	ENSSTOG00000014560	-	100	84.951	Ictidomys_tridecemlineatus
ENSIPUG00000010859	rab18b	99	84.314	ENSKMAG00000007364	rab18b	99	84.314	Kryptolebias_marmoratus
ENSIPUG00000010859	rab18b	99	84.314	ENSLBEG00000019428	rab18b	99	84.314	Labrus_bergylta
ENSIPUG00000010859	rab18b	100	76.098	ENSLACG00000011256	rab18b	100	76.098	Latimeria_chalumnae
ENSIPUG00000010859	rab18b	93	87.435	ENSLAFG00000015582	RAB18	100	84.466	Loxodonta_africana
ENSIPUG00000010859	rab18b	100	84.466	ENSMFAG00000006430	RAB18	100	84.466	Macaca_fascicularis
ENSIPUG00000010859	rab18b	100	83.010	ENSMMUG00000046971	RAB18	74	83.010	Macaca_mulatta
ENSIPUG00000010859	rab18b	100	84.466	ENSMNEG00000038180	RAB18	100	84.466	Macaca_nemestrina
ENSIPUG00000010859	rab18b	100	84.466	ENSMLEG00000033595	RAB18	100	84.466	Mandrillus_leucophaeus
ENSIPUG00000010859	rab18b	100	83.415	ENSMAMG00000018445	rab18b	100	83.415	Mastacembelus_armatus
ENSIPUG00000010859	rab18b	99	85.294	ENSMZEG00005008244	rab18b	99	85.294	Maylandia_zebra
ENSIPUG00000010859	rab18b	100	76.098	ENSMAUG00000020698	-	100	76.098	Mesocricetus_auratus
ENSIPUG00000010859	rab18b	93	87.435	ENSMICG00000017280	RAB18	100	84.951	Microcebus_murinus
ENSIPUG00000010859	rab18b	100	84.951	ENSMOCG00000013044	Rab18	100	84.951	Microtus_ochrogaster
ENSIPUG00000010859	rab18b	91	74.747	ENSMMOG00000017849	rab18b	99	73.148	Mola_mola
ENSIPUG00000010859	rab18b	100	85.854	ENSMODG00000008253	RAB18	100	85.854	Monodelphis_domestica
ENSIPUG00000010859	rab18b	100	75.122	ENSMODG00000024936	-	100	75.122	Monodelphis_domestica
ENSIPUG00000010859	rab18b	99	84.314	ENSMALG00000005069	rab18b	99	84.314	Monopterus_albus
ENSIPUG00000010859	rab18b	100	84.466	MGP_CAROLIEiJ_G0021978	Rab18	100	84.466	Mus_caroli
ENSIPUG00000010859	rab18b	100	84.466	ENSMUSG00000073639	Rab18	100	84.466	Mus_musculus
ENSIPUG00000010859	rab18b	100	84.466	MGP_PahariEiJ_G0018716	Rab18	100	84.466	Mus_pahari
ENSIPUG00000010859	rab18b	100	84.466	MGP_SPRETEiJ_G0022894	Rab18	100	84.466	Mus_spretus
ENSIPUG00000010859	rab18b	100	84.466	ENSMPUG00000010592	RAB18	100	84.466	Mustela_putorius_furo
ENSIPUG00000010859	rab18b	100	74.153	ENSMLUG00000027295	RAB18	100	74.153	Myotis_lucifugus
ENSIPUG00000010859	rab18b	100	84.951	ENSNGAG00000001465	Rab18	100	84.951	Nannospalax_galili
ENSIPUG00000010859	rab18b	99	84.804	ENSNBRG00000008137	rab18b	99	84.804	Neolamprologus_brichardi
ENSIPUG00000010859	rab18b	100	84.466	ENSNLEG00000016970	RAB18	100	84.466	Nomascus_leucogenys
ENSIPUG00000010859	rab18b	100	84.951	ENSODEG00000004150	-	100	84.951	Octodon_degus
ENSIPUG00000010859	rab18b	99	84.804	ENSONIG00000018673	rab18b	99	84.804	Oreochromis_niloticus
ENSIPUG00000010859	rab18b	91	89.840	ENSOANG00000021391	RAB18	100	85.437	Ornithorhynchus_anatinus
ENSIPUG00000010859	rab18b	100	84.466	ENSOCUG00000022307	RAB18	100	84.466	Oryctolagus_cuniculus
ENSIPUG00000010859	rab18b	99	83.824	ENSORLG00000009609	rab18b	99	83.824	Oryzias_latipes
ENSIPUG00000010859	rab18b	99	83.824	ENSORLG00020011590	rab18b	99	83.824	Oryzias_latipes_hni
ENSIPUG00000010859	rab18b	99	83.824	ENSORLG00015007182	rab18b	99	83.824	Oryzias_latipes_hsok
ENSIPUG00000010859	rab18b	99	83.824	ENSOMEG00000007546	rab18b	99	83.824	Oryzias_melastigma
ENSIPUG00000010859	rab18b	93	87.435	ENSOGAG00000028015	RAB18	100	84.466	Otolemur_garnettii
ENSIPUG00000010859	rab18b	100	84.466	ENSOARG00000016208	RAB18	100	84.466	Ovis_aries
ENSIPUG00000010859	rab18b	100	84.466	ENSPPAG00000041625	RAB18	100	84.466	Pan_paniscus
ENSIPUG00000010859	rab18b	100	84.466	ENSPPRG00000010314	RAB18	100	84.466	Panthera_pardus
ENSIPUG00000010859	rab18b	100	84.466	ENSPTIG00000011667	RAB18	100	84.466	Panthera_tigris_altaica
ENSIPUG00000010859	rab18b	100	84.466	ENSPTRG00000002384	RAB18	100	84.466	Pan_troglodytes
ENSIPUG00000010859	rab18b	100	84.466	ENSPANG00000023005	RAB18	100	84.466	Papio_anubis
ENSIPUG00000010859	rab18b	98	84.314	ENSPMAG00000005322	rab18b	98	84.314	Petromyzon_marinus
ENSIPUG00000010859	rab18b	100	84.878	ENSPCIG00000028705	-	88	84.878	Phascolarctos_cinereus
ENSIPUG00000010859	rab18b	99	84.804	ENSPFOG00000013491	rab18b	99	84.804	Poecilia_formosa
ENSIPUG00000010859	rab18b	99	84.804	ENSPLAG00000019136	rab18b	99	84.804	Poecilia_latipinna
ENSIPUG00000010859	rab18b	99	84.804	ENSPMEG00000008223	rab18b	99	84.804	Poecilia_mexicana
ENSIPUG00000010859	rab18b	100	84.466	ENSPPYG00000002172	RAB18	100	84.466	Pongo_abelii
ENSIPUG00000010859	rab18b	93	87.435	ENSPCOG00000018906	RAB18	100	84.951	Propithecus_coquereli
ENSIPUG00000010859	rab18b	99	85.294	ENSPNYG00000001751	rab18b	99	85.294	Pundamilia_nyererei
ENSIPUG00000010859	rab18b	100	92.683	ENSPNAG00000002404	rab18b	100	92.683	Pygocentrus_nattereri
ENSIPUG00000010859	rab18b	100	84.951	ENSRNOG00000018972	Rab18	100	84.951	Rattus_norvegicus
ENSIPUG00000010859	rab18b	100	83.981	ENSRBIG00000035948	RAB18	100	83.981	Rhinopithecus_bieti
ENSIPUG00000010859	rab18b	100	84.466	ENSRROG00000040563	RAB18	100	84.466	Rhinopithecus_roxellana
ENSIPUG00000010859	rab18b	100	85.366	ENSSHAG00000007613	RAB18	100	85.366	Sarcophilus_harrisii
ENSIPUG00000010859	rab18b	99	84.804	ENSSMAG00000011814	rab18b	99	84.804	Scophthalmus_maximus
ENSIPUG00000010859	rab18b	99	85.784	ENSSDUG00000005960	rab18b	99	85.784	Seriola_dumerili
ENSIPUG00000010859	rab18b	99	85.784	ENSSLDG00000006014	rab18b	99	85.784	Seriola_lalandi_dorsalis
ENSIPUG00000010859	rab18b	99	84.314	ENSSPAG00000020875	rab18b	99	84.314	Stegastes_partitus
ENSIPUG00000010859	rab18b	100	84.466	ENSSSCG00000028655	RAB18	100	84.466	Sus_scrofa
ENSIPUG00000010859	rab18b	93	76.606	ENSTGUG00000001105	-	100	74.786	Taeniopygia_guttata
ENSIPUG00000010859	rab18b	99	85.784	ENSTRUG00000004283	rab18b	99	85.784	Takifugu_rubripes
ENSIPUG00000010859	rab18b	99	84.390	ENSTNIG00000007882	rab18b	99	84.390	Tetraodon_nigroviridis
ENSIPUG00000010859	rab18b	100	84.466	ENSVVUG00000001705	RAB18	100	84.466	Vulpes_vulpes
ENSIPUG00000010859	rab18b	99	84.314	ENSXMAG00000006945	rab18b	99	84.314	Xiphophorus_maculatus