EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000011065 (Gene tree)
Gene ID: 108276368
Gene Symbol: PAN2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 19114 bases
Position: chr15:21677286-21696399
Accession: 108276368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000016405	RNase_T	PF00929.24	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017099	-	6712	XM_017487976	ENSIPUP00000016405	1194 (aa)	XP_017343465	W5U7I1

Gene Model

Click here to download ENSIPUG00000011065's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011065	PAN2	100	87.107	ENSAPOG00000022955	pan2	100	87.521	Acanthochromis_polyacanthus
ENSIPUG00000011065	PAN2	99	75.372	ENSAMEG00000003824	PAN2	100	75.372	Ailuropoda_melanoleuca
ENSIPUG00000011065	PAN2	99	84.097	ENSACIG00000013079	pan2	99	84.596	Amphilophus_citrinellus
ENSIPUG00000011065	PAN2	99	68.666	ENSACIG00000012858	PAN2	99	68.666	Amphilophus_citrinellus
ENSIPUG00000011065	PAN2	100	87.025	ENSAOCG00000022334	pan2	100	87.107	Amphiprion_ocellaris
ENSIPUG00000011065	PAN2	100	87.190	ENSAPEG00000022760	pan2	100	87.273	Amphiprion_percula
ENSIPUG00000011065	PAN2	99	87.000	ENSATEG00000024030	pan2	100	87.417	Anabas_testudineus
ENSIPUG00000011065	PAN2	93	77.442	ENSAPLG00000005195	PAN2	100	77.620	Anas_platyrhynchos
ENSIPUG00000011065	PAN2	99	77.032	ENSACAG00000007067	PAN2	100	77.363	Anolis_carolinensis
ENSIPUG00000011065	PAN2	99	74.690	ENSANAG00000036468	PAN2	99	81.117	Aotus_nancymaae
ENSIPUG00000011065	PAN2	99	66.191	ENSACLG00000023821	pan2	99	66.107	Astatotilapia_calliptera
ENSIPUG00000011065	PAN2	100	86.921	ENSACLG00000023674	pan2	100	86.921	Astatotilapia_calliptera
ENSIPUG00000011065	PAN2	99	89.474	ENSAMXG00000005418	pan2	98	89.950	Astyanax_mexicanus
ENSIPUG00000011065	PAN2	99	75.186	ENSBTAG00000004376	PAN2	100	75.186	Bos_taurus
ENSIPUG00000011065	PAN2	82	30.539	WBGene00017951	panl-2	88	30.539	Caenorhabditis_elegans
ENSIPUG00000011065	PAN2	99	74.876	ENSCJAG00000011141	PAN2	100	74.876	Callithrix_jacchus
ENSIPUG00000011065	PAN2	99	75.103	ENSCAFG00000000119	PAN2	100	79.898	Canis_familiaris
ENSIPUG00000011065	PAN2	99	74.854	ENSCAFG00020024865	PAN2	100	74.223	Canis_lupus_dingo
ENSIPUG00000011065	PAN2	99	74.442	ENSCHIG00000026935	PAN2	100	74.363	Capra_hircus
ENSIPUG00000011065	PAN2	99	74.212	ENSTSYG00000006927	PAN2	99	81.383	Carlito_syrichta
ENSIPUG00000011065	PAN2	99	74.938	ENSCPOG00000014918	PAN2	100	74.856	Cavia_porcellus
ENSIPUG00000011065	PAN2	99	75.041	ENSCCAG00000036637	PAN2	99	81.383	Cebus_capucinus
ENSIPUG00000011065	PAN2	99	74.855	ENSCATG00000045076	PAN2	99	81.818	Cercocebus_atys
ENSIPUG00000011065	PAN2	99	74.959	ENSCLAG00000011700	PAN2	100	74.774	Chinchilla_lanigera
ENSIPUG00000011065	PAN2	99	74.711	ENSCSAG00000005173	PAN2	100	74.711	Chlorocebus_sabaeus
ENSIPUG00000011065	PAN2	99	78.257	ENSCPBG00000014029	PAN2	100	78.257	Chrysemys_picta_bellii
ENSIPUG00000011065	PAN2	91	46.941	ENSCSAVG00000003833	-	97	61.808	Ciona_savignyi
ENSIPUG00000011065	PAN2	99	73.576	ENSCANG00000017798	PAN2	100	73.576	Colobus_angolensis_palliatus
ENSIPUG00000011065	PAN2	99	75.145	ENSCGRG00001019707	Pan2	100	75.145	Cricetulus_griseus_chok1gshd
ENSIPUG00000011065	PAN2	99	74.405	ENSCGRG00000009996	Pan2	100	74.405	Cricetulus_griseus_crigri
ENSIPUG00000011065	PAN2	100	82.066	ENSCSEG00000021529	pan2	100	82.479	Cynoglossus_semilaevis
ENSIPUG00000011065	PAN2	100	86.116	ENSCVAG00000010197	pan2	100	86.116	Cyprinodon_variegatus
ENSIPUG00000011065	PAN2	100	88.474	ENSDARG00000074675	pan2	100	88.474	Danio_rerio
ENSIPUG00000011065	PAN2	99	75.311	ENSDNOG00000010940	PAN2	100	75.311	Dasypus_novemcinctus
ENSIPUG00000011065	PAN2	94	41.954	FBgn0033352	PAN2	96	41.653	Drosophila_melanogaster
ENSIPUG00000011065	PAN2	75	84.703	ENSETEG00000012041	PAN2	82	84.703	Echinops_telfairi
ENSIPUG00000011065	PAN2	98	55.442	ENSEBUG00000002773	pan2	98	55.442	Eptatretus_burgeri
ENSIPUG00000011065	PAN2	99	74.795	ENSEASG00005005235	PAN2	100	74.795	Equus_asinus_asinus
ENSIPUG00000011065	PAN2	99	75.186	ENSECAG00000019814	PAN2	100	75.186	Equus_caballus
ENSIPUG00000011065	PAN2	99	86.971	ENSELUG00000024604	pan2	99	87.303	Esox_lucius
ENSIPUG00000011065	PAN2	99	75.289	ENSFCAG00000012021	PAN2	100	75.289	Felis_catus
ENSIPUG00000011065	PAN2	99	77.387	ENSFALG00000000464	PAN2	99	77.102	Ficedula_albicollis
ENSIPUG00000011065	PAN2	99	74.815	ENSFDAG00000017104	PAN2	100	74.569	Fukomys_damarensis
ENSIPUG00000011065	PAN2	90	82.675	ENSFHEG00000000157	pan2	97	82.675	Fundulus_heteroclitus
ENSIPUG00000011065	PAN2	100	83.746	ENSGMOG00000007249	pan2	99	84.241	Gadus_morhua
ENSIPUG00000011065	PAN2	99	78.745	ENSGALG00000031512	PAN2	100	78.441	Gallus_gallus
ENSIPUG00000011065	PAN2	100	85.950	ENSGAFG00000000284	pan2	100	85.950	Gambusia_affinis
ENSIPUG00000011065	PAN2	100	85.173	ENSGACG00000010722	pan2	99	85.832	Gasterosteus_aculeatus
ENSIPUG00000011065	PAN2	99	77.593	ENSGAGG00000007868	PAN2	100	77.593	Gopherus_agassizii
ENSIPUG00000011065	PAN2	99	74.876	ENSGGOG00000009115	PAN2	99	81.818	Gorilla_gorilla
ENSIPUG00000011065	PAN2	100	86.838	ENSHBUG00000005234	pan2	100	86.838	Haplochromis_burtoni
ENSIPUG00000011065	PAN2	99	74.586	ENSHGLG00000005647	PAN2	99	74.338	Heterocephalus_glaber_female
ENSIPUG00000011065	PAN2	99	74.421	ENSHGLG00100014057	PAN2	99	74.338	Heterocephalus_glaber_male
ENSIPUG00000011065	PAN2	100	85.029	ENSHCOG00000007920	pan2	100	85.112	Hippocampus_comes
ENSIPUG00000011065	PAN2	94	74.721	ENSSTOG00000015974	PAN2	100	75.025	Ictidomys_tridecemlineatus
ENSIPUG00000011065	PAN2	99	74.421	ENSJJAG00000013044	Pan2	98	74.421	Jaculus_jaculus
ENSIPUG00000011065	PAN2	100	86.116	ENSKMAG00000006192	pan2	100	86.364	Kryptolebias_marmoratus
ENSIPUG00000011065	PAN2	99	80.885	ENSLBEG00000015763	pan2	99	81.386	Labrus_bergylta
ENSIPUG00000011065	PAN2	99	71.774	ENSLACG00000018694	PAN2	100	71.751	Latimeria_chalumnae
ENSIPUG00000011065	PAN2	100	86.457	ENSLOCG00000004333	pan2	99	86.457	Lepisosteus_oculatus
ENSIPUG00000011065	PAN2	99	73.229	ENSLAFG00000014873	PAN2	100	73.229	Loxodonta_africana
ENSIPUG00000011065	PAN2	99	74.690	ENSMFAG00000002293	PAN2	99	81.818	Macaca_fascicularis
ENSIPUG00000011065	PAN2	99	74.690	ENSMMUG00000013482	PAN2	100	78.000	Macaca_mulatta
ENSIPUG00000011065	PAN2	99	74.773	ENSMNEG00000033264	PAN2	99	81.551	Macaca_nemestrina
ENSIPUG00000011065	PAN2	99	74.855	ENSMLEG00000037388	PAN2	99	81.818	Mandrillus_leucophaeus
ENSIPUG00000011065	PAN2	99	87.262	ENSMAMG00000001624	pan2	100	87.262	Mastacembelus_armatus
ENSIPUG00000011065	PAN2	99	67.534	ENSMZEG00005026472	pan2	99	67.450	Maylandia_zebra
ENSIPUG00000011065	PAN2	100	86.921	ENSMZEG00005026462	pan2	100	86.921	Maylandia_zebra
ENSIPUG00000011065	PAN2	96	78.879	ENSMGAG00000001439	PAN2	99	78.707	Meleagris_gallopavo
ENSIPUG00000011065	PAN2	99	74.503	ENSMAUG00000012602	Pan2	99	74.503	Mesocricetus_auratus
ENSIPUG00000011065	PAN2	99	74.938	ENSMICG00000017661	PAN2	99	80.108	Microcebus_murinus
ENSIPUG00000011065	PAN2	99	74.484	ENSMOCG00000007191	Pan2	100	74.484	Microtus_ochrogaster
ENSIPUG00000011065	PAN2	99	86.767	ENSMMOG00000009313	pan2	97	86.851	Mola_mola
ENSIPUG00000011065	PAN2	99	87.262	ENSMALG00000013377	pan2	100	87.262	Monopterus_albus
ENSIPUG00000011065	PAN2	99	73.788	MGP_CAROLIEiJ_G0015930	Pan2	100	73.788	Mus_caroli
ENSIPUG00000011065	PAN2	99	74.503	ENSMUSG00000005682	Pan2	100	74.503	Mus_musculus
ENSIPUG00000011065	PAN2	99	73.952	MGP_PahariEiJ_G0031154	Pan2	100	73.952	Mus_pahari
ENSIPUG00000011065	PAN2	99	74.442	MGP_SPRETEiJ_G0016755	Pan2	100	74.442	Mus_spretus
ENSIPUG00000011065	PAN2	99	75.269	ENSMPUG00000001383	PAN2	100	75.269	Mustela_putorius_furo
ENSIPUG00000011065	PAN2	99	74.442	ENSMLUG00000006737	PAN2	100	74.773	Myotis_lucifugus
ENSIPUG00000011065	PAN2	99	74.835	ENSNGAG00000007930	Pan2	100	74.835	Nannospalax_galili
ENSIPUG00000011065	PAN2	92	91.781	ENSNBRG00000006585	pan2	99	91.781	Neolamprologus_brichardi
ENSIPUG00000011065	PAN2	99	71.464	ENSNLEG00000017499	PAN2	99	81.818	Nomascus_leucogenys
ENSIPUG00000011065	PAN2	99	76.758	ENSMEUG00000010125	PAN2	100	76.758	Notamacropus_eugenii
ENSIPUG00000011065	PAN2	99	74.156	ENSOPRG00000001468	PAN2	100	74.074	Ochotona_princeps
ENSIPUG00000011065	PAN2	99	74.466	ENSODEG00000007203	PAN2	100	74.466	Octodon_degus
ENSIPUG00000011065	PAN2	99	84.779	ENSONIG00000016732	pan2	100	84.861	Oreochromis_niloticus
ENSIPUG00000011065	PAN2	81	67.768	ENSOANG00000005151	PAN2	99	67.570	Ornithorhynchus_anatinus
ENSIPUG00000011065	PAN2	99	74.424	ENSOCUG00000007227	PAN2	100	74.424	Oryctolagus_cuniculus
ENSIPUG00000011065	PAN2	99	85.207	ENSORLG00000015195	pan2	100	85.124	Oryzias_latipes
ENSIPUG00000011065	PAN2	99	85.124	ENSORLG00020000277	pan2	100	85.041	Oryzias_latipes_hni
ENSIPUG00000011065	PAN2	99	84.876	ENSORLG00015005193	pan2	100	84.793	Oryzias_latipes_hsok
ENSIPUG00000011065	PAN2	99	85.455	ENSOMEG00000022087	pan2	100	85.372	Oryzias_melastigma
ENSIPUG00000011065	PAN2	99	74.220	ENSOGAG00000030620	PAN2	100	74.220	Otolemur_garnettii
ENSIPUG00000011065	PAN2	99	75.289	ENSOARG00000009379	PAN2	100	75.289	Ovis_aries
ENSIPUG00000011065	PAN2	99	74.773	ENSPPAG00000001208	PAN2	99	81.818	Pan_paniscus
ENSIPUG00000011065	PAN2	99	75.207	ENSPPRG00000021586	PAN2	100	75.207	Panthera_pardus
ENSIPUG00000011065	PAN2	99	71.546	ENSPTIG00000012494	PAN2	100	71.546	Panthera_tigris_altaica
ENSIPUG00000011065	PAN2	99	74.773	ENSPTRG00000052054	PAN2	99	81.818	Pan_troglodytes
ENSIPUG00000011065	PAN2	93	76.523	ENSPANG00000018906	PAN2	99	81.818	Papio_anubis
ENSIPUG00000011065	PAN2	100	85.655	ENSPKIG00000003973	pan2	100	85.655	Paramormyrops_kingsleyae
ENSIPUG00000011065	PAN2	99	74.586	ENSPSIG00000003267	PAN2	100	74.669	Pelodiscus_sinensis
ENSIPUG00000011065	PAN2	99	85.477	ENSPMGG00000023186	pan2	100	85.477	Periophthalmus_magnuspinnatus
ENSIPUG00000011065	PAN2	99	74.159	ENSPEMG00000018505	Pan2	100	74.159	Peromyscus_maniculatus_bairdii
ENSIPUG00000011065	PAN2	91	67.634	ENSPMAG00000004731	pan2	100	67.362	Petromyzon_marinus
ENSIPUG00000011065	PAN2	99	76.866	ENSPCIG00000024643	PAN2	100	76.866	Phascolarctos_cinereus
ENSIPUG00000011065	PAN2	100	86.116	ENSPFOG00000008392	pan2	100	86.116	Poecilia_formosa
ENSIPUG00000011065	PAN2	100	86.116	ENSPLAG00000009198	pan2	100	86.116	Poecilia_latipinna
ENSIPUG00000011065	PAN2	100	86.116	ENSPMEG00000001484	pan2	100	86.116	Poecilia_mexicana
ENSIPUG00000011065	PAN2	100	86.033	ENSPREG00000000900	pan2	100	86.033	Poecilia_reticulata
ENSIPUG00000011065	PAN2	88	77.751	ENSPPYG00000004656	PAN2	100	77.751	Pongo_abelii
ENSIPUG00000011065	PAN2	93	76.730	ENSPCAG00000011047	PAN2	99	76.730	Procavia_capensis
ENSIPUG00000011065	PAN2	99	74.607	ENSPCOG00000018263	PAN2	100	74.938	Propithecus_coquereli
ENSIPUG00000011065	PAN2	94	73.212	ENSPVAG00000007591	PAN2	94	73.212	Pteropus_vampyrus
ENSIPUG00000011065	PAN2	99	87.073	ENSPNYG00000002629	pan2	99	87.073	Pundamilia_nyererei
ENSIPUG00000011065	PAN2	100	92.590	ENSPNAG00000027140	pan2	100	92.756	Pygocentrus_nattereri
ENSIPUG00000011065	PAN2	99	74.669	ENSRNOG00000032441	Pan2	100	74.669	Rattus_norvegicus
ENSIPUG00000011065	PAN2	99	74.773	ENSRBIG00000029591	PAN2	99	81.551	Rhinopithecus_bieti
ENSIPUG00000011065	PAN2	99	74.690	ENSRROG00000041950	PAN2	99	81.551	Rhinopithecus_roxellana
ENSIPUG00000011065	PAN2	78	38.261	YGL094C	-	96	38.551	Saccharomyces_cerevisiae
ENSIPUG00000011065	PAN2	99	74.855	ENSSBOG00000027343	PAN2	99	81.383	Saimiri_boliviensis_boliviensis
ENSIPUG00000011065	PAN2	93	77.471	ENSSHAG00000000122	PAN2	100	78.913	Sarcophilus_harrisii
ENSIPUG00000011065	PAN2	100	85.750	ENSSFOG00015017740	pan2	100	85.833	Scleropages_formosus
ENSIPUG00000011065	PAN2	100	85.726	ENSSMAG00000020901	pan2	100	86.221	Scophthalmus_maximus
ENSIPUG00000011065	PAN2	100	87.273	ENSSDUG00000001840	pan2	100	87.686	Seriola_dumerili
ENSIPUG00000011065	PAN2	100	87.025	ENSSLDG00000013866	pan2	100	87.438	Seriola_lalandi_dorsalis
ENSIPUG00000011065	PAN2	92	75.947	ENSSARG00000013350	PAN2	92	75.947	Sorex_araneus
ENSIPUG00000011065	PAN2	93	79.586	ENSSPUG00000004270	PAN2	99	79.586	Sphenodon_punctatus
ENSIPUG00000011065	PAN2	100	86.777	ENSSPAG00000019970	pan2	100	87.190	Stegastes_partitus
ENSIPUG00000011065	PAN2	99	74.855	ENSSSCG00000000393	PAN2	100	74.855	Sus_scrofa
ENSIPUG00000011065	PAN2	100	85.691	ENSTRUG00000014260	pan2	100	85.443	Takifugu_rubripes
ENSIPUG00000011065	PAN2	100	85.525	ENSTNIG00000012537	pan2	99	85.939	Tetraodon_nigroviridis
ENSIPUG00000011065	PAN2	80	75.629	ENSTTRG00000007150	PAN2	80	75.629	Tursiops_truncatus
ENSIPUG00000011065	PAN2	99	75.227	ENSUAMG00000026522	PAN2	100	75.227	Ursus_americanus
ENSIPUG00000011065	PAN2	99	74.631	ENSUMAG00000017020	PAN2	100	74.631	Ursus_maritimus
ENSIPUG00000011065	PAN2	79	90.148	ENSVPAG00000007309	PAN2	85	90.148	Vicugna_pacos
ENSIPUG00000011065	PAN2	99	75.103	ENSVVUG00000021878	PAN2	100	75.103	Vulpes_vulpes
ENSIPUG00000011065	PAN2	98	75.464	ENSXETG00000009434	pan2	100	75.885	Xenopus_tropicalis
ENSIPUG00000011065	PAN2	99	81.126	ENSXCOG00000014391	pan2	100	81.043	Xiphophorus_couchianus
ENSIPUG00000011065	PAN2	100	86.281	ENSXMAG00000011661	pan2	100	86.281	Xiphophorus_maculatus