EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000011083 (Gene tree)
Gene ID: 108278270
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 33533 bases
Position: chr2:16340263-16373795
Accession: 108278270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000016428	Ribonuc_2-5A	PF06479.12	2.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017122	-	4644	XM_017491506	ENSIPUP00000016428	1038 (aa)	XP_017346995	A0A2D0SXE7

Gene Model

Click here to download ENSIPUG00000011083's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04140	Autophagy - animal	KEGG
ipu04141	Protein processing in endoplasmic reticulum	KEGG
ipu04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000011083	ern1	85	56.551	ENSIPUG00000001249	ern2	95	56.376

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011083	ern1	98	79.749	ENSAPOG00000009999	ern1	93	81.004	Acanthochromis_polyacanthus
ENSIPUG00000011083	ern1	93	84.156	ENSACIG00000021716	ern1	95	80.347	Amphilophus_citrinellus
ENSIPUG00000011083	ern1	99	78.819	ENSAOCG00000012309	ern1	97	78.725	Amphiprion_ocellaris
ENSIPUG00000011083	ern1	98	80.661	ENSAPEG00000011263	ern1	99	84.946	Amphiprion_percula
ENSIPUG00000011083	ern1	94	83.436	ENSATEG00000024468	ern1	89	83.436	Anabas_testudineus
ENSIPUG00000011083	ern1	93	84.135	ENSACLG00000027919	ern1	89	84.135	Astatotilapia_calliptera
ENSIPUG00000011083	ern1	100	84.674	ENSAMXG00000000944	ern1	100	84.674	Astyanax_mexicanus
ENSIPUG00000011083	ern1	93	83.264	ENSCSEG00000014500	ern1	97	81.412	Cynoglossus_semilaevis
ENSIPUG00000011083	ern1	90	84.076	ENSCVAG00000002988	ern1	93	82.088	Cyprinodon_variegatus
ENSIPUG00000011083	ern1	93	85.109	ENSDARG00000013997	ern1	100	85.120	Danio_rerio
ENSIPUG00000011083	ern1	98	76.039	ENSELUG00000005957	ern1	98	76.232	Esox_lucius
ENSIPUG00000011083	ern1	96	81.312	ENSFHEG00000005578	ern1	95	81.231	Fundulus_heteroclitus
ENSIPUG00000011083	ern1	90	81.760	ENSGMOG00000011232	ern1	100	81.568	Gadus_morhua
ENSIPUG00000011083	ern1	93	82.819	ENSGAFG00000020231	ern1	94	82.059	Gambusia_affinis
ENSIPUG00000011083	ern1	90	84.216	ENSGACG00000011700	ern1	97	84.216	Gasterosteus_aculeatus
ENSIPUG00000011083	ern1	93	83.162	ENSHBUG00000012581	ern1	89	83.983	Haplochromis_burtoni
ENSIPUG00000011083	ern1	96	80.519	ENSHCOG00000016199	ern1	94	80.714	Hippocampus_comes
ENSIPUG00000011083	ern1	93	81.631	ENSKMAG00000019499	ern1	95	77.724	Kryptolebias_marmoratus
ENSIPUG00000011083	ern1	91	80.693	ENSLBEG00000025907	ern1	89	80.693	Labrus_bergylta
ENSIPUG00000011083	ern1	99	78.551	ENSMAMG00000023439	ern1	97	79.460	Mastacembelus_armatus
ENSIPUG00000011083	ern1	93	84.135	ENSMZEG00005003221	ern1	89	84.135	Maylandia_zebra
ENSIPUG00000011083	ern1	93	82.407	ENSMMOG00000007650	ern1	96	82.407	Mola_mola
ENSIPUG00000011083	ern1	96	80.119	ENSMALG00000017775	ern1	92	80.119	Monopterus_albus
ENSIPUG00000011083	ern1	99	79.752	ENSNBRG00000002179	ern1	97	79.752	Neolamprologus_brichardi
ENSIPUG00000011083	ern1	92	83.247	ENSONIG00000017169	ern1	99	83.247	Oreochromis_niloticus
ENSIPUG00000011083	ern1	94	83.077	ENSORLG00000008940	ern1	91	83.077	Oryzias_latipes
ENSIPUG00000011083	ern1	94	82.889	ENSORLG00020018387	ern1	91	82.889	Oryzias_latipes_hni
ENSIPUG00000011083	ern1	94	82.854	ENSORLG00015007946	ern1	91	82.854	Oryzias_latipes_hsok
ENSIPUG00000011083	ern1	93	83.661	ENSOMEG00000011741	ern1	90	83.661	Oryzias_melastigma
ENSIPUG00000011083	ern1	94	81.565	ENSPKIG00000005593	ern1	99	81.565	Paramormyrops_kingsleyae
ENSIPUG00000011083	ern1	98	79.360	ENSPMGG00000020442	ern1	99	79.360	Periophthalmus_magnuspinnatus
ENSIPUG00000011083	ern1	98	77.989	ENSPFOG00000007378	ern1	99	77.989	Poecilia_formosa
ENSIPUG00000011083	ern1	98	77.989	ENSPLAG00000014780	ern1	99	77.989	Poecilia_latipinna
ENSIPUG00000011083	ern1	98	78.083	ENSPMEG00000016324	ern1	99	78.083	Poecilia_mexicana
ENSIPUG00000011083	ern1	93	82.613	ENSPREG00000006286	ern1	91	82.613	Poecilia_reticulata
ENSIPUG00000011083	ern1	93	83.930	ENSPNYG00000017929	ern1	94	83.930	Pundamilia_nyererei
ENSIPUG00000011083	ern1	100	85.509	ENSPNAG00000029447	ern1	100	85.509	Pygocentrus_nattereri
ENSIPUG00000011083	ern1	98	78.170	ENSSMAG00000015042	ern1	95	78.170	Scophthalmus_maximus
ENSIPUG00000011083	ern1	98	81.641	ENSSDUG00000009098	ern1	92	81.641	Seriola_dumerili
ENSIPUG00000011083	ern1	96	82.306	ENSSLDG00000023254	ern1	91	82.306	Seriola_lalandi_dorsalis
ENSIPUG00000011083	ern1	99	78.257	ENSSPAG00000017539	ern1	99	78.257	Stegastes_partitus
ENSIPUG00000011083	ern1	93	80.977	ENSTRUG00000001041	ern1	95	80.773	Takifugu_rubripes
ENSIPUG00000011083	ern1	90	84.272	ENSTNIG00000017990	ern1	98	84.305	Tetraodon_nigroviridis
ENSIPUG00000011083	ern1	93	83.005	ENSXCOG00000010330	ern1	95	83.005	Xiphophorus_couchianus
ENSIPUG00000011083	ern1	98	78.240	ENSXMAG00000001310	ern1	99	78.240	Xiphophorus_maculatus