EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000011192 (Gene tree)
Gene ID: 100528773
Gene Symbol: polr2d
Alias: rpb4
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5698 bases
Position: chr7:25048155-25053852
Accession: 100528773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000016533	RNA_pol_Rpb4	PF03874.16	6.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017231	-	3335	-	ENSIPUP00000016533	141 (aa)	-	E3TGE1

Gene Model

Click here to download ENSIPUG00000011192's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011192	polr2d	100	91.549	ENSG00000144231	POLR2D	100	97.115	Homo_sapiens
ENSIPUG00000011192	polr2d	99	92.857	ENSAPOG00000023553	polr2d	97	92.857	Acanthochromis_polyacanthus
ENSIPUG00000011192	polr2d	100	90.278	ENSAMEG00000011746	POLR2D	100	90.278	Ailuropoda_melanoleuca
ENSIPUG00000011192	polr2d	99	92.857	ENSAOCG00000007295	polr2d	97	92.857	Amphiprion_ocellaris
ENSIPUG00000011192	polr2d	99	92.857	ENSAPEG00000018714	polr2d	97	92.857	Amphiprion_percula
ENSIPUG00000011192	polr2d	100	92.361	ENSATEG00000020416	polr2d	100	92.361	Anabas_testudineus
ENSIPUG00000011192	polr2d	99	92.199	ENSACAG00000005255	POLR2D	99	92.199	Anolis_carolinensis
ENSIPUG00000011192	polr2d	100	91.549	ENSANAG00000019959	POLR2D	100	91.549	Aotus_nancymaae
ENSIPUG00000011192	polr2d	100	93.056	ENSACLG00000009919	polr2d	100	70.833	Astatotilapia_calliptera
ENSIPUG00000011192	polr2d	99	95.714	ENSAMXG00000008954	polr2d	98	95.714	Astyanax_mexicanus
ENSIPUG00000011192	polr2d	100	91.549	ENSBTAG00000053244	POLR2D	100	91.549	Bos_taurus
ENSIPUG00000011192	polr2d	99	56.250	WBGene00018391	rpb-4	100	56.250	Caenorhabditis_elegans
ENSIPUG00000011192	polr2d	100	90.845	ENSCJAG00000021814	-	100	90.845	Callithrix_jacchus
ENSIPUG00000011192	polr2d	100	91.549	ENSCJAG00000042216	-	100	91.549	Callithrix_jacchus
ENSIPUG00000011192	polr2d	100	91.549	ENSCAFG00000004311	POLR2D	100	91.549	Canis_familiaris
ENSIPUG00000011192	polr2d	100	91.549	ENSCAFG00020003617	POLR2D	100	91.549	Canis_lupus_dingo
ENSIPUG00000011192	polr2d	100	91.549	ENSCHIG00000025995	POLR2D	100	91.549	Capra_hircus
ENSIPUG00000011192	polr2d	83	95.726	ENSTSYG00000036021	POLR2D	100	95.726	Carlito_syrichta
ENSIPUG00000011192	polr2d	100	90.845	ENSCPOG00000002571	POLR2D	100	90.845	Cavia_porcellus
ENSIPUG00000011192	polr2d	100	91.549	ENSCCAG00000037709	POLR2D	100	91.549	Cebus_capucinus
ENSIPUG00000011192	polr2d	100	91.549	ENSCATG00000036749	POLR2D	100	91.549	Cercocebus_atys
ENSIPUG00000011192	polr2d	100	90.845	ENSCLAG00000004449	POLR2D	100	90.845	Chinchilla_lanigera
ENSIPUG00000011192	polr2d	100	91.549	ENSCSAG00000016861	POLR2D	100	91.549	Chlorocebus_sabaeus
ENSIPUG00000011192	polr2d	83	96.581	ENSCHOG00000013850	POLR2D	100	96.581	Choloepus_hoffmanni
ENSIPUG00000011192	polr2d	100	92.254	ENSCPBG00000019132	POLR2D	51	92.254	Chrysemys_picta_bellii
ENSIPUG00000011192	polr2d	91	87.500	ENSCING00000011474	-	96	87.500	Ciona_intestinalis
ENSIPUG00000011192	polr2d	91	88.281	ENSCSAVG00000008353	-	88	88.281	Ciona_savignyi
ENSIPUG00000011192	polr2d	100	91.549	ENSCANG00000043665	POLR2D	100	91.549	Colobus_angolensis_palliatus
ENSIPUG00000011192	polr2d	100	91.549	ENSCGRG00001013608	Polr2d	100	91.549	Cricetulus_griseus_chok1gshd
ENSIPUG00000011192	polr2d	83	96.581	ENSCGRG00000012624	Polr2d	100	96.581	Cricetulus_griseus_crigri
ENSIPUG00000011192	polr2d	99	92.857	ENSCSEG00000006147	polr2d	97	92.857	Cynoglossus_semilaevis
ENSIPUG00000011192	polr2d	100	90.972	ENSCVAG00000000779	polr2d	100	90.972	Cyprinodon_variegatus
ENSIPUG00000011192	polr2d	100	97.872	ENSDARG00000076509	polr2d	100	97.872	Danio_rerio
ENSIPUG00000011192	polr2d	100	91.549	ENSDNOG00000008527	POLR2D	100	91.549	Dasypus_novemcinctus
ENSIPUG00000011192	polr2d	100	91.549	ENSDORG00000026897	Polr2d	100	91.549	Dipodomys_ordii
ENSIPUG00000011192	polr2d	94	78.195	FBgn0263757	Rpb4	96	78.195	Drosophila_melanogaster
ENSIPUG00000011192	polr2d	100	91.549	ENSEBUG00000007675	polr2d	100	91.549	Eptatretus_burgeri
ENSIPUG00000011192	polr2d	100	91.549	ENSEASG00005007103	POLR2D	100	91.549	Equus_asinus_asinus
ENSIPUG00000011192	polr2d	100	91.549	ENSECAG00000000556	POLR2D	100	91.549	Equus_caballus
ENSIPUG00000011192	polr2d	100	93.706	ENSELUG00000005928	polr2d	100	93.706	Esox_lucius
ENSIPUG00000011192	polr2d	100	91.549	ENSFCAG00000027816	POLR2D	100	91.549	Felis_catus
ENSIPUG00000011192	polr2d	100	91.549	ENSFALG00000003528	POLR2D	100	91.549	Ficedula_albicollis
ENSIPUG00000011192	polr2d	100	90.141	ENSFDAG00000007217	POLR2D	100	90.141	Fukomys_damarensis
ENSIPUG00000011192	polr2d	100	95.105	ENSGMOG00000001823	polr2d	99	95.105	Gadus_morhua
ENSIPUG00000011192	polr2d	100	91.549	ENSGALG00000002057	POLR2D	100	91.549	Gallus_gallus
ENSIPUG00000011192	polr2d	100	91.667	ENSGAFG00000016932	polr2d	71	91.667	Gambusia_affinis
ENSIPUG00000011192	polr2d	100	90.972	ENSGACG00000004639	polr2d	100	90.972	Gasterosteus_aculeatus
ENSIPUG00000011192	polr2d	100	92.254	ENSGAGG00000021308	POLR2D	100	92.254	Gopherus_agassizii
ENSIPUG00000011192	polr2d	100	91.549	ENSGGOG00000004723	POLR2D	100	91.549	Gorilla_gorilla
ENSIPUG00000011192	polr2d	100	90.845	ENSHGLG00000016570	Polr2d	100	90.845	Heterocephalus_glaber_female
ENSIPUG00000011192	polr2d	100	90.845	ENSHGLG00100013785	Polr2d	100	90.845	Heterocephalus_glaber_male
ENSIPUG00000011192	polr2d	100	91.549	ENSHCOG00000006425	polr2d	100	91.549	Hippocampus_comes
ENSIPUG00000011192	polr2d	100	89.437	ENSSTOG00000023329	POLR2D	100	89.437	Ictidomys_tridecemlineatus
ENSIPUG00000011192	polr2d	83	90.598	ENSJJAG00000005723	-	94	90.598	Jaculus_jaculus
ENSIPUG00000011192	polr2d	100	91.549	ENSJJAG00000015053	-	100	91.549	Jaculus_jaculus
ENSIPUG00000011192	polr2d	100	83.803	ENSJJAG00000000783	-	100	83.803	Jaculus_jaculus
ENSIPUG00000011192	polr2d	83	96.581	ENSKMAG00000010677	polr2d	66	96.581	Kryptolebias_marmoratus
ENSIPUG00000011192	polr2d	100	94.366	ENSLACG00000017253	POLR2D	100	94.366	Latimeria_chalumnae
ENSIPUG00000011192	polr2d	100	93.750	ENSLOCG00000009106	polr2d	100	93.750	Lepisosteus_oculatus
ENSIPUG00000011192	polr2d	100	91.549	ENSLAFG00000001848	POLR2D	100	91.549	Loxodonta_africana
ENSIPUG00000011192	polr2d	100	91.549	ENSMFAG00000031937	POLR2D	100	91.549	Macaca_fascicularis
ENSIPUG00000011192	polr2d	100	91.549	ENSMMUG00000001989	POLR2D	100	91.549	Macaca_mulatta
ENSIPUG00000011192	polr2d	100	91.549	ENSMNEG00000035505	POLR2D	100	91.549	Macaca_nemestrina
ENSIPUG00000011192	polr2d	100	91.549	ENSMLEG00000035827	POLR2D	100	91.549	Mandrillus_leucophaeus
ENSIPUG00000011192	polr2d	100	91.549	ENSMGAG00000001248	POLR2D	100	91.549	Meleagris_gallopavo
ENSIPUG00000011192	polr2d	100	90.845	ENSMAUG00000014518	Polr2d	100	90.845	Mesocricetus_auratus
ENSIPUG00000011192	polr2d	100	90.845	ENSMICG00000009931	POLR2D	100	90.845	Microcebus_murinus
ENSIPUG00000011192	polr2d	100	88.732	ENSMOCG00000019367	Polr2d	100	88.732	Microtus_ochrogaster
ENSIPUG00000011192	polr2d	100	92.254	ENSMODG00000018653	-	100	92.254	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.761	ENSMODG00000025031	-	100	76.761	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.761	ENSMODG00000025034	-	100	76.761	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.761	ENSMODG00000025035	-	100	76.761	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.761	ENSMODG00000025036	-	100	76.761	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	77.465	ENSMODG00000025030	-	100	77.465	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.056	ENSMODG00000025032	-	100	76.056	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	77.465	ENSMODG00000025028	-	100	77.465	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.761	ENSMODG00000025029	-	100	76.761	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	77.465	ENSMODG00000025027	-	100	77.465	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	77.465	ENSMODG00000025026	-	100	77.465	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	76.761	ENSMODG00000025033	-	100	76.761	Monodelphis_domestica
ENSIPUG00000011192	polr2d	100	92.361	ENSMALG00000018266	polr2d	100	92.361	Monopterus_albus
ENSIPUG00000011192	polr2d	100	91.549	MGP_CAROLIEiJ_G0022066	Polr2d	100	91.549	Mus_caroli
ENSIPUG00000011192	polr2d	100	91.549	ENSMUSG00000024258	Polr2d	100	91.549	Mus_musculus
ENSIPUG00000011192	polr2d	100	91.549	MGP_PahariEiJ_G0018800	Polr2d	100	91.549	Mus_pahari
ENSIPUG00000011192	polr2d	100	91.549	MGP_SPRETEiJ_G0022977	Polr2d	100	91.549	Mus_spretus
ENSIPUG00000011192	polr2d	100	91.549	ENSMPUG00000016685	POLR2D	100	91.549	Mustela_putorius_furo
ENSIPUG00000011192	polr2d	84	96.610	ENSMLUG00000006862	POLR2D	100	96.610	Myotis_lucifugus
ENSIPUG00000011192	polr2d	100	91.549	ENSNGAG00000014862	Polr2d	100	91.549	Nannospalax_galili
ENSIPUG00000011192	polr2d	100	91.549	ENSNLEG00000027191	POLR2D	100	91.549	Nomascus_leucogenys
ENSIPUG00000011192	polr2d	83	95.726	ENSOPRG00000005327	POLR2D	100	95.726	Ochotona_princeps
ENSIPUG00000011192	polr2d	100	90.845	ENSODEG00000005262	POLR2D	100	90.845	Octodon_degus
ENSIPUG00000011192	polr2d	100	92.361	ENSONIG00000017290	polr2d	100	92.361	Oreochromis_niloticus
ENSIPUG00000011192	polr2d	84	97.458	ENSOANG00000013216	POLR2D	100	97.458	Ornithorhynchus_anatinus
ENSIPUG00000011192	polr2d	100	89.437	ENSOCUG00000023403	-	100	89.437	Oryctolagus_cuniculus
ENSIPUG00000011192	polr2d	100	85.315	ENSOCUG00000021449	-	100	85.315	Oryctolagus_cuniculus
ENSIPUG00000011192	polr2d	100	90.972	ENSORLG00000005266	polr2d	100	90.972	Oryzias_latipes
ENSIPUG00000011192	polr2d	100	90.972	ENSORLG00020006647	polr2d	100	90.972	Oryzias_latipes_hni
ENSIPUG00000011192	polr2d	100	90.972	ENSORLG00015003222	polr2d	100	90.972	Oryzias_latipes_hsok
ENSIPUG00000011192	polr2d	100	90.972	ENSOMEG00000018915	polr2d	100	90.972	Oryzias_melastigma
ENSIPUG00000011192	polr2d	100	89.583	ENSOGAG00000017118	POLR2D	100	89.583	Otolemur_garnettii
ENSIPUG00000011192	polr2d	100	91.549	ENSOARG00000015995	POLR2D	100	91.549	Ovis_aries
ENSIPUG00000011192	polr2d	100	91.549	ENSPPRG00000020222	POLR2D	100	91.549	Panthera_pardus
ENSIPUG00000011192	polr2d	100	91.549	ENSPTIG00000018618	POLR2D	100	91.549	Panthera_tigris_altaica
ENSIPUG00000011192	polr2d	100	91.549	ENSPTRG00000012436	POLR2D	100	91.549	Pan_troglodytes
ENSIPUG00000011192	polr2d	100	91.549	ENSPANG00000018602	POLR2D	100	91.549	Papio_anubis
ENSIPUG00000011192	polr2d	100	93.750	ENSPKIG00000012166	polr2d	100	93.750	Paramormyrops_kingsleyae
ENSIPUG00000011192	polr2d	84	97.458	ENSPSIG00000002873	POLR2D	100	97.458	Pelodiscus_sinensis
ENSIPUG00000011192	polr2d	100	91.549	ENSPEMG00000018244	Polr2d	100	91.549	Peromyscus_maniculatus_bairdii
ENSIPUG00000011192	polr2d	100	88.028	ENSPMAG00000005021	polr2d	99	88.028	Petromyzon_marinus
ENSIPUG00000011192	polr2d	100	91.667	ENSPFOG00000008969	polr2d	100	91.667	Poecilia_formosa
ENSIPUG00000011192	polr2d	100	91.667	ENSPLAG00000017210	polr2d	100	91.667	Poecilia_latipinna
ENSIPUG00000011192	polr2d	100	91.667	ENSPMEG00000005160	polr2d	100	91.667	Poecilia_mexicana
ENSIPUG00000011192	polr2d	74	98.077	ENSPREG00000021862	polr2d	100	98.077	Poecilia_reticulata
ENSIPUG00000011192	polr2d	100	91.549	ENSPPYG00000012759	POLR2D	100	91.549	Pongo_abelii
ENSIPUG00000011192	polr2d	100	91.549	ENSPCAG00000001396	POLR2D	100	91.549	Procavia_capensis
ENSIPUG00000011192	polr2d	100	90.845	ENSPCOG00000022076	POLR2D	100	90.845	Propithecus_coquereli
ENSIPUG00000011192	polr2d	100	91.549	ENSPVAG00000004002	POLR2D	100	91.549	Pteropus_vampyrus
ENSIPUG00000011192	polr2d	99	95.000	ENSPNAG00000018246	polr2d	98	95.000	Pygocentrus_nattereri
ENSIPUG00000011192	polr2d	100	91.549	ENSRNOG00000016231	Polr2d	100	91.549	Rattus_norvegicus
ENSIPUG00000011192	polr2d	100	91.549	ENSRBIG00000039326	POLR2D	100	91.549	Rhinopithecus_bieti
ENSIPUG00000011192	polr2d	100	91.549	ENSRROG00000023289	POLR2D	100	91.549	Rhinopithecus_roxellana
ENSIPUG00000011192	polr2d	100	91.549	ENSSHAG00000014817	-	100	91.549	Sarcophilus_harrisii
ENSIPUG00000011192	polr2d	100	95.139	ENSSFOG00015024204	polr2d	100	95.139	Scleropages_formosus
ENSIPUG00000011192	polr2d	100	91.667	ENSSDUG00000006060	polr2d	100	91.667	Seriola_dumerili
ENSIPUG00000011192	polr2d	95	95.522	ENSSLDG00000024485	polr2d	100	91.034	Seriola_lalandi_dorsalis
ENSIPUG00000011192	polr2d	83	95.726	ENSSARG00000009037	POLR2D	100	95.726	Sorex_araneus
ENSIPUG00000011192	polr2d	100	91.549	ENSSPUG00000014915	POLR2D	100	91.549	Sphenodon_punctatus
ENSIPUG00000011192	polr2d	100	92.361	ENSSPAG00000013386	polr2d	100	92.361	Stegastes_partitus
ENSIPUG00000011192	polr2d	100	91.549	ENSSSCG00000039230	POLR2D	100	91.549	Sus_scrofa
ENSIPUG00000011192	polr2d	100	91.549	ENSTGUG00000005773	POLR2D	99	91.549	Taeniopygia_guttata
ENSIPUG00000011192	polr2d	100	94.366	ENSTRUG00000004740	polr2d	100	94.366	Takifugu_rubripes
ENSIPUG00000011192	polr2d	100	95.070	ENSTNIG00000011210	polr2d	100	95.070	Tetraodon_nigroviridis
ENSIPUG00000011192	polr2d	83	96.581	ENSTBEG00000006081	POLR2D	100	96.581	Tupaia_belangeri
ENSIPUG00000011192	polr2d	83	96.581	ENSTTRG00000010055	POLR2D	100	96.581	Tursiops_truncatus
ENSIPUG00000011192	polr2d	91	96.124	ENSUAMG00000024374	POLR2D	98	96.124	Ursus_americanus
ENSIPUG00000011192	polr2d	85	95.833	ENSUMAG00000008280	POLR2D	100	97.115	Ursus_maritimus
ENSIPUG00000011192	polr2d	83	96.581	ENSVPAG00000007239	POLR2D	100	96.581	Vicugna_pacos
ENSIPUG00000011192	polr2d	100	91.549	ENSVVUG00000008616	POLR2D	100	91.549	Vulpes_vulpes
ENSIPUG00000011192	polr2d	100	90.141	ENSXETG00000002955	polr2d	100	90.141	Xenopus_tropicalis
ENSIPUG00000011192	polr2d	74	98.077	ENSXCOG00000012668	polr2d	100	98.077	Xiphophorus_couchianus
ENSIPUG00000011192	polr2d	74	98.077	ENSXMAG00000014031	polr2d	100	98.077	Xiphophorus_maculatus