EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000011443 (Gene tree)
Gene ID: 108256644
Gene Symbol: gars
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10284 bases
Position: chr23:5463933-5474216
Accession: 108256644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000016897	HGTP_anticodon	PF03129.20	5.9e-15	1	1
ENSIPUP00000016897	tRNA-synt_2b	PF00587.25	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017613	-	2145	XM_017453711	ENSIPUP00000016897	714 (aa)	XP_017309200	-

Gene Model

Click here to download ENSIPUG00000011443's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011443	gars	95	76.923	ENSG00000106105	GARS	99	75.234	Homo_sapiens
ENSIPUG00000011443	gars	90	78.529	ENSAPOG00000020089	gars	99	78.529	Acanthochromis_polyacanthus
ENSIPUG00000011443	gars	100	81.684	ENSAPOG00000019999	gars	99	81.684	Acanthochromis_polyacanthus
ENSIPUG00000011443	gars	99	75.672	ENSAMEG00000006652	GARS	99	75.672	Ailuropoda_melanoleuca
ENSIPUG00000011443	gars	100	83.021	ENSACIG00000020744	gars	99	83.021	Amphilophus_citrinellus
ENSIPUG00000011443	gars	90	82.344	ENSACIG00000020797	gars	99	82.344	Amphilophus_citrinellus
ENSIPUG00000011443	gars	100	82.219	ENSAOCG00000009108	gars	99	82.219	Amphiprion_ocellaris
ENSIPUG00000011443	gars	67	82.157	ENSAOCG00000002479	gars	100	82.157	Amphiprion_ocellaris
ENSIPUG00000011443	gars	91	79.124	ENSAPEG00000018903	gars	99	79.124	Amphiprion_percula
ENSIPUG00000011443	gars	100	81.818	ENSAPEG00000018850	gars	99	81.818	Amphiprion_percula
ENSIPUG00000011443	gars	100	81.034	ENSATEG00000008784	gars	100	85.281	Anabas_testudineus
ENSIPUG00000011443	gars	63	83.621	ENSAPLG00000015638	-	100	83.621	Anas_platyrhynchos
ENSIPUG00000011443	gars	91	78.717	ENSACAG00000005601	GARS	100	78.717	Anolis_carolinensis
ENSIPUG00000011443	gars	99	76.081	ENSANAG00000022536	GARS	100	79.708	Aotus_nancymaae
ENSIPUG00000011443	gars	100	81.551	ENSACLG00000027174	gars	99	81.551	Astatotilapia_calliptera
ENSIPUG00000011443	gars	90	80.973	ENSACLG00000027158	gars	99	80.973	Astatotilapia_calliptera
ENSIPUG00000011443	gars	100	80.355	ENSAMXG00000014895	gars	96	85.427	Astyanax_mexicanus
ENSIPUG00000011443	gars	91	79.009	ENSBTAG00000018972	GARS	99	74.035	Bos_taurus
ENSIPUG00000011443	gars	89	54.613	WBGene00001744	gars-1	99	54.613	Caenorhabditis_elegans
ENSIPUG00000011443	gars	91	79.941	ENSCJAG00000008595	GARS	95	79.941	Callithrix_jacchus
ENSIPUG00000011443	gars	90	79.706	ENSCAFG00000003086	GARS	92	75.441	Canis_familiaris
ENSIPUG00000011443	gars	90	79.706	ENSCAFG00020004272	GARS	98	79.706	Canis_lupus_dingo
ENSIPUG00000011443	gars	96	75.934	ENSCHIG00000016912	GARS	100	79.545	Capra_hircus
ENSIPUG00000011443	gars	91	79.446	ENSTSYG00000008538	GARS	99	74.499	Carlito_syrichta
ENSIPUG00000011443	gars	83	62.119	ENSCAPG00000007526	GARS	99	64.045	Cavia_aperea
ENSIPUG00000011443	gars	89	79.880	ENSCPOG00000007547	GARS	92	79.880	Cavia_porcellus
ENSIPUG00000011443	gars	91	79.738	ENSCCAG00000011512	GARS	99	75.101	Cebus_capucinus
ENSIPUG00000011443	gars	95	77.887	ENSCATG00000036699	GARS	99	75.267	Cercocebus_atys
ENSIPUG00000011443	gars	91	79.300	ENSCLAG00000007985	GARS	96	79.300	Chinchilla_lanigera
ENSIPUG00000011443	gars	91	80.029	ENSCSAG00000014588	GARS	99	75.134	Chlorocebus_sabaeus
ENSIPUG00000011443	gars	91	67.055	ENSCHOG00000003253	GARS	99	64.082	Choloepus_hoffmanni
ENSIPUG00000011443	gars	89	80.149	ENSCPBG00000019482	GARS	92	80.149	Chrysemys_picta_bellii
ENSIPUG00000011443	gars	90	59.496	ENSCING00000008937	-	99	59.496	Ciona_intestinalis
ENSIPUG00000011443	gars	95	77.746	ENSCANG00000027727	GARS	99	75.941	Colobus_angolensis_palliatus
ENSIPUG00000011443	gars	91	79.619	ENSCGRG00001020450	Gars	99	75.305	Cricetulus_griseus_chok1gshd
ENSIPUG00000011443	gars	89	79.880	ENSCGRG00000008342	Gars	94	79.880	Cricetulus_griseus_crigri
ENSIPUG00000011443	gars	90	74.336	ENSCSEG00000017654	gars	98	74.336	Cynoglossus_semilaevis
ENSIPUG00000011443	gars	100	82.109	ENSCSEG00000017671	gars	99	82.109	Cynoglossus_semilaevis
ENSIPUG00000011443	gars	100	81.442	ENSCVAG00000007149	gars	99	81.442	Cyprinodon_variegatus
ENSIPUG00000011443	gars	92	85.901	ENSDARG00000059070	gars	99	85.901	Danio_rerio
ENSIPUG00000011443	gars	91	80.175	ENSDNOG00000046478	GARS	100	80.728	Dasypus_novemcinctus
ENSIPUG00000011443	gars	91	79.941	ENSDORG00000002672	Gars	94	79.823	Dipodomys_ordii
ENSIPUG00000011443	gars	90	58.667	FBgn0027088	GlyRS	99	58.667	Drosophila_melanogaster
ENSIPUG00000011443	gars	83	77.389	ENSETEG00000012196	GARS	98	77.389	Echinops_telfairi
ENSIPUG00000011443	gars	65	76.618	ENSEBUG00000002254	gars	89	76.618	Eptatretus_burgeri
ENSIPUG00000011443	gars	65	71.577	ENSEBUG00000002654	gars	87	71.577	Eptatretus_burgeri
ENSIPUG00000011443	gars	91	80.029	ENSEASG00005000388	GARS	99	76.319	Equus_asinus_asinus
ENSIPUG00000011443	gars	91	80.175	ENSECAG00000019373	GARS	99	76.455	Equus_caballus
ENSIPUG00000011443	gars	100	80.533	ENSELUG00000003692	gars	100	80.533	Esox_lucius
ENSIPUG00000011443	gars	100	75.000	ENSFCAG00000011415	GARS	86	75.000	Felis_catus
ENSIPUG00000011443	gars	82	79.708	ENSFALG00000006550	GARS	100	79.708	Ficedula_albicollis
ENSIPUG00000011443	gars	89	79.850	ENSFDAG00000014466	GARS	100	79.850	Fukomys_damarensis
ENSIPUG00000011443	gars	100	81.142	ENSFHEG00000013189	gars	99	81.142	Fundulus_heteroclitus
ENSIPUG00000011443	gars	100	77.867	ENSGMOG00000010728	gars	100	77.867	Gadus_morhua
ENSIPUG00000011443	gars	83	73.077	ENSGMOG00000008856	-	100	73.077	Gadus_morhua
ENSIPUG00000011443	gars	91	79.386	ENSGALG00000005694	GARS	100	79.270	Gallus_gallus
ENSIPUG00000011443	gars	100	80.908	ENSGAFG00000005228	gars	99	80.908	Gambusia_affinis
ENSIPUG00000011443	gars	100	80.319	ENSGACG00000003410	gars	100	80.319	Gasterosteus_aculeatus
ENSIPUG00000011443	gars	82	81.068	ENSGAGG00000017755	GARS	99	81.068	Gopherus_agassizii
ENSIPUG00000011443	gars	91	79.738	ENSGGOG00000004916	GARS	99	75.668	Gorilla_gorilla
ENSIPUG00000011443	gars	90	80.531	ENSHBUG00000000815	gars	99	80.531	Haplochromis_burtoni
ENSIPUG00000011443	gars	100	81.818	ENSHBUG00000016481	gars	99	81.818	Haplochromis_burtoni
ENSIPUG00000011443	gars	96	76.625	ENSHGLG00000016342	GARS	99	75.709	Heterocephalus_glaber_female
ENSIPUG00000011443	gars	91	79.941	ENSHGLG00100006787	GARS	97	79.941	Heterocephalus_glaber_male
ENSIPUG00000011443	gars	91	81.460	ENSHCOG00000005261	gars	100	81.460	Hippocampus_comes
ENSIPUG00000011443	gars	50	62.162	ENSHCOG00000005286	gars	96	66.482	Hippocampus_comes
ENSIPUG00000011443	gars	91	78.644	ENSSTOG00000015493	GARS	95	76.323	Ictidomys_tridecemlineatus
ENSIPUG00000011443	gars	91	78.717	ENSJJAG00000022474	Gars	99	78.717	Jaculus_jaculus
ENSIPUG00000011443	gars	100	80.585	ENSKMAG00000010428	gars	99	80.585	Kryptolebias_marmoratus
ENSIPUG00000011443	gars	100	82.243	ENSLBEG00000019228	gars	100	82.243	Labrus_bergylta
ENSIPUG00000011443	gars	50	78.989	ENSLBEG00000013122	-	100	78.989	Labrus_bergylta
ENSIPUG00000011443	gars	90	80.621	ENSLBEG00000019179	gars	100	80.621	Labrus_bergylta
ENSIPUG00000011443	gars	68	79.038	ENSLACG00000002810	GARS	100	79.038	Latimeria_chalumnae
ENSIPUG00000011443	gars	100	80.348	ENSLOCG00000009688	gars	99	80.348	Lepisosteus_oculatus
ENSIPUG00000011443	gars	99	74.528	ENSLAFG00000002496	GARS	99	78.488	Loxodonta_africana
ENSIPUG00000011443	gars	95	77.887	ENSMFAG00000038863	GARS	99	75.267	Macaca_fascicularis
ENSIPUG00000011443	gars	95	77.887	ENSMMUG00000004719	GARS	99	75.267	Macaca_mulatta
ENSIPUG00000011443	gars	95	71.972	ENSMNEG00000043203	GARS	99	69.652	Macaca_nemestrina
ENSIPUG00000011443	gars	95	78.028	ENSMLEG00000044430	GARS	99	75.401	Mandrillus_leucophaeus
ENSIPUG00000011443	gars	96	83.588	ENSMAMG00000001894	gars	99	84.708	Mastacembelus_armatus
ENSIPUG00000011443	gars	100	81.684	ENSMZEG00005019740	gars	99	81.684	Maylandia_zebra
ENSIPUG00000011443	gars	90	80.917	ENSMZEG00005019754	gars	100	80.917	Maylandia_zebra
ENSIPUG00000011443	gars	91	79.270	ENSMGAG00000003162	GARS	93	79.270	Meleagris_gallopavo
ENSIPUG00000011443	gars	97	75.824	ENSMAUG00000016852	Gars	98	75.824	Mesocricetus_auratus
ENSIPUG00000011443	gars	91	79.854	ENSMICG00000046006	GARS	100	79.854	Microcebus_murinus
ENSIPUG00000011443	gars	98	75.650	ENSMOCG00000017680	Gars	98	75.650	Microtus_ochrogaster
ENSIPUG00000011443	gars	100	77.763	ENSMMOG00000009695	gars	100	77.822	Mola_mola
ENSIPUG00000011443	gars	100	81.016	ENSMALG00000006592	gars	93	81.016	Monopterus_albus
ENSIPUG00000011443	gars	97	76.487	MGP_CAROLIEiJ_G0028410	Gars	98	76.487	Mus_caroli
ENSIPUG00000011443	gars	91	79.562	ENSMUSG00000029777	Gars	94	79.562	Mus_musculus
ENSIPUG00000011443	gars	91	79.124	MGP_PahariEiJ_G0022160	Gars	94	79.124	Mus_pahari
ENSIPUG00000011443	gars	91	79.562	MGP_SPRETEiJ_G0029412	Gars	99	84.848	Mus_spretus
ENSIPUG00000011443	gars	91	80.029	ENSMPUG00000005116	GARS	99	75.770	Mustela_putorius_furo
ENSIPUG00000011443	gars	91	79.738	ENSMLUG00000002043	GARS	93	79.738	Myotis_lucifugus
ENSIPUG00000011443	gars	91	79.240	ENSNGAG00000021844	Gars	98	75.650	Nannospalax_galili
ENSIPUG00000011443	gars	50	77.121	ENSNBRG00000018643	gars	100	77.121	Neolamprologus_brichardi
ENSIPUG00000011443	gars	100	81.952	ENSNBRG00000018585	gars	99	81.952	Neolamprologus_brichardi
ENSIPUG00000011443	gars	95	78.451	ENSNLEG00000015152	GARS	99	76.581	Nomascus_leucogenys
ENSIPUG00000011443	gars	88	71.235	ENSMEUG00000001741	GARS	100	71.235	Notamacropus_eugenii
ENSIPUG00000011443	gars	89	76.535	ENSOPRG00000005342	GARS	86	76.535	Ochotona_princeps
ENSIPUG00000011443	gars	91	78.582	ENSODEG00000008246	GARS	87	78.582	Octodon_degus
ENSIPUG00000011443	gars	89	74.925	ENSOANG00000006262	GARS	91	74.925	Ornithorhynchus_anatinus
ENSIPUG00000011443	gars	90	79.381	ENSOCUG00000005295	GARS	99	79.381	Oryctolagus_cuniculus
ENSIPUG00000011443	gars	100	80.265	ENSORLG00000009470	gars	99	80.265	Oryzias_latipes
ENSIPUG00000011443	gars	94	81.215	ENSORLG00020013036	gars	98	81.215	Oryzias_latipes_hni
ENSIPUG00000011443	gars	100	80.876	ENSORLG00015012886	gars	99	80.876	Oryzias_latipes_hsok
ENSIPUG00000011443	gars	50	72.081	ENSOMEG00000000133	gars	100	72.081	Oryzias_melastigma
ENSIPUG00000011443	gars	100	74.766	ENSOGAG00000013321	GARS	99	74.766	Otolemur_garnettii
ENSIPUG00000011443	gars	91	78.571	ENSOARG00000008017	GARS	99	73.797	Ovis_aries
ENSIPUG00000011443	gars	97	76.680	ENSPPAG00000037266	GARS	99	75.401	Pan_paniscus
ENSIPUG00000011443	gars	91	79.738	ENSPPRG00000001917	GARS	99	75.778	Panthera_pardus
ENSIPUG00000011443	gars	90	80.118	ENSPTIG00000016096	GARS	99	80.118	Panthera_tigris_altaica
ENSIPUG00000011443	gars	97	76.680	ENSPTRG00000019042	GARS	99	75.802	Pan_troglodytes
ENSIPUG00000011443	gars	95	78.028	ENSPANG00000026231	GARS	99	75.401	Papio_anubis
ENSIPUG00000011443	gars	99	80.533	ENSPKIG00000014863	gars	97	80.533	Paramormyrops_kingsleyae
ENSIPUG00000011443	gars	89	80.180	ENSPSIG00000010935	GARS	99	81.169	Pelodiscus_sinensis
ENSIPUG00000011443	gars	50	74.873	ENSPMGG00000023648	gars	99	74.873	Periophthalmus_magnuspinnatus
ENSIPUG00000011443	gars	99	78.382	ENSPMGG00000023644	gars	99	78.382	Periophthalmus_magnuspinnatus
ENSIPUG00000011443	gars	89	79.549	ENSPEMG00000019930	Gars	100	79.549	Peromyscus_maniculatus_bairdii
ENSIPUG00000011443	gars	90	69.839	ENSPMAG00000006586	gars	98	69.839	Petromyzon_marinus
ENSIPUG00000011443	gars	92	76.308	ENSPCIG00000017010	GARS	95	73.619	Phascolarctos_cinereus
ENSIPUG00000011443	gars	100	80.744	ENSPFOG00000004593	gars	99	80.744	Poecilia_formosa
ENSIPUG00000011443	gars	100	80.611	ENSPLAG00000008038	gars	99	80.611	Poecilia_latipinna
ENSIPUG00000011443	gars	100	80.876	ENSPMEG00000005901	gars	99	80.876	Poecilia_mexicana
ENSIPUG00000011443	gars	99	81.200	ENSPREG00000020960	gars	97	81.200	Poecilia_reticulata
ENSIPUG00000011443	gars	97	76.616	ENSPPYG00000017673	GARS	99	75.502	Pongo_abelii
ENSIPUG00000011443	gars	100	73.164	ENSPCAG00000007199	GARS	99	73.200	Procavia_capensis
ENSIPUG00000011443	gars	97	73.278	ENSPCOG00000008887	GARS	99	72.059	Propithecus_coquereli
ENSIPUG00000011443	gars	98	74.933	ENSPVAG00000013565	GARS	99	74.933	Pteropus_vampyrus
ENSIPUG00000011443	gars	100	81.283	ENSPNYG00000005017	gars	99	81.283	Pundamilia_nyererei
ENSIPUG00000011443	gars	90	80.678	ENSPNYG00000004960	gars	99	80.678	Pundamilia_nyererei
ENSIPUG00000011443	gars	100	81.684	ENSPNAG00000020164	gars	99	81.684	Pygocentrus_nattereri
ENSIPUG00000011443	gars	100	74.465	ENSRNOG00000011052	Gars	99	74.465	Rattus_norvegicus
ENSIPUG00000011443	gars	94	76.781	ENSRBIG00000040287	GARS	98	75.239	Rhinopithecus_bieti
ENSIPUG00000011443	gars	94	77.872	ENSRROG00000044600	GARS	98	76.294	Rhinopithecus_roxellana
ENSIPUG00000011443	gars	82	45.274	YBR121C	GRS1	98	45.274	Saccharomyces_cerevisiae
ENSIPUG00000011443	gars	77	47.863	YPR081C	-	94	47.863	Saccharomyces_cerevisiae
ENSIPUG00000011443	gars	91	79.155	ENSSBOG00000022287	GARS	93	79.155	Saimiri_boliviensis_boliviensis
ENSIPUG00000011443	gars	91	71.449	ENSSHAG00000003419	GARS	99	71.449	Sarcophilus_harrisii
ENSIPUG00000011443	gars	92	82.948	ENSSFOG00015000573	gars	100	77.982	Scleropages_formosus
ENSIPUG00000011443	gars	100	81.432	ENSSMAG00000013672	gars	99	81.432	Scophthalmus_maximus
ENSIPUG00000011443	gars	90	81.037	ENSSMAG00000013709	gars	99	81.037	Scophthalmus_maximus
ENSIPUG00000011443	gars	100	82.205	ENSSDUG00000016795	gars	99	82.205	Seriola_dumerili
ENSIPUG00000011443	gars	90	70.649	ENSSDUG00000016758	gars	100	70.649	Seriola_dumerili
ENSIPUG00000011443	gars	100	82.205	ENSSLDG00000014279	gars	99	82.205	Seriola_lalandi_dorsalis
ENSIPUG00000011443	gars	90	82.249	ENSSLDG00000014238	gars	100	82.249	Seriola_lalandi_dorsalis
ENSIPUG00000011443	gars	67	76.208	ENSSARG00000008410	GARS	82	76.208	Sorex_araneus
ENSIPUG00000011443	gars	91	79.765	ENSSPUG00000001815	-	99	75.203	Sphenodon_punctatus
ENSIPUG00000011443	gars	100	77.463	ENSSPAG00000012003	gars	99	77.463	Stegastes_partitus
ENSIPUG00000011443	gars	91	80.000	ENSSSCG00000016677	GARS	99	75.167	Sus_scrofa
ENSIPUG00000011443	gars	89	77.910	ENSTGUG00000000364	GARS	100	77.910	Taeniopygia_guttata
ENSIPUG00000011443	gars	100	80.637	ENSTRUG00000017557	gars	100	80.637	Takifugu_rubripes
ENSIPUG00000011443	gars	95	82.958	ENSTNIG00000012738	gars	99	82.958	Tetraodon_nigroviridis
ENSIPUG00000011443	gars	92	69.741	ENSTBEG00000008972	GARS	92	69.741	Tupaia_belangeri
ENSIPUG00000011443	gars	88	79.217	ENSTTRG00000000334	GARS	99	79.217	Tursiops_truncatus
ENSIPUG00000011443	gars	91	80.438	ENSUAMG00000016756	GARS	93	80.321	Ursus_americanus
ENSIPUG00000011443	gars	89	81.024	ENSUMAG00000002158	GARS	100	81.169	Ursus_maritimus
ENSIPUG00000011443	gars	97	70.759	ENSVPAG00000009438	GARS	99	70.548	Vicugna_pacos
ENSIPUG00000011443	gars	90	79.706	ENSVVUG00000020981	GARS	87	79.589	Vulpes_vulpes
ENSIPUG00000011443	gars	91	78.841	ENSXETG00000018474	gars	92	78.841	Xenopus_tropicalis
ENSIPUG00000011443	gars	100	80.345	ENSXCOG00000010005	gars	99	80.345	Xiphophorus_couchianus
ENSIPUG00000011443	gars	100	80.908	ENSXMAG00000009402	gars	98	80.908	Xiphophorus_maculatus