EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000011498 (Gene tree)
Gene ID: 108276086
Gene Symbol: zgc:56699
Alias: fk52a03|wu:fk52a03
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8779 bases
Position: chr15:21790458-21799236
Accession: 108276086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000016948	zf-U11-48K	PF05253.12	3e-16	1	2
ENSIPUP00000016948	zf-U11-48K	PF05253.12	3e-16	2	2
ENSIPUP00000016962	zf-U11-48K	PF05253.12	3e-16	1	2
ENSIPUP00000016962	zf-U11-48K	PF05253.12	3e-16	2	2
ENSIPUP00000016978	zf-U11-48K	PF05253.12	3e-16	1	2
ENSIPUP00000016978	zf-U11-48K	PF05253.12	3e-16	2	2
ENSIPUP00000016929	zf-U11-48K	PF05253.12	3.2e-16	1	2
ENSIPUP00000016929	zf-U11-48K	PF05253.12	3.2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017644	-	1911	-	ENSIPUP00000016929	190 (aa)	-	-
ENSIPUT00000017696	-	1325	XM_017487433	ENSIPUP00000016978	185 (aa)	XP_017342922	A0A2D0SJP0
ENSIPUT00000017677	-	1714	-	ENSIPUP00000016962	185 (aa)	-	A0A2D0SJP0
ENSIPUT00000017664	-	1158	XM_017487434	ENSIPUP00000016948	185 (aa)	XP_017342923	A0A2D0SJP0

Gene Model

Click here to download ENSIPUG00000011498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000011498	zgc:56699	85	45.342	ENSIPUG00000002483	-	87	45.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011498	zgc:56699	95	47.458	ENSAPOG00000021951	-	98	47.458	Acanthochromis_polyacanthus
ENSIPUG00000011498	zgc:56699	77	49.650	ENSAPOG00000000311	-	79	49.650	Acanthochromis_polyacanthus
ENSIPUG00000011498	zgc:56699	95	46.591	ENSACIG00000013400	zgc:56699	96	46.591	Amphilophus_citrinellus
ENSIPUG00000011498	zgc:56699	95	50.279	ENSAOCG00000013650	-	98	50.279	Amphiprion_ocellaris
ENSIPUG00000011498	zgc:56699	95	43.820	ENSAPEG00000006689	zgc:56699	97	43.820	Amphiprion_percula
ENSIPUG00000011498	zgc:56699	95	54.802	ENSATEG00000024058	zgc:56699	96	54.802	Anabas_testudineus
ENSIPUG00000011498	zgc:56699	98	44.624	ENSACLG00000023562	zgc:56699	92	44.624	Astatotilapia_calliptera
ENSIPUG00000011498	zgc:56699	96	58.101	ENSAMXG00000038346	zgc:56699	99	58.101	Astyanax_mexicanus
ENSIPUG00000011498	zgc:56699	98	39.785	ENSAMXG00000036095	-	77	42.473	Astyanax_mexicanus
ENSIPUG00000011498	zgc:56699	95	46.893	ENSCSEG00000021520	zgc:56699	82	46.893	Cynoglossus_semilaevis
ENSIPUG00000011498	zgc:56699	79	46.622	ENSCVAG00000009972	zgc:56699	76	46.622	Cyprinodon_variegatus
ENSIPUG00000011498	zgc:56699	78	44.966	ENSDARG00000099586	CR382383.2	83	44.966	Danio_rerio
ENSIPUG00000011498	zgc:56699	96	54.645	ENSDARG00000000887	zgc:56699	100	54.645	Danio_rerio
ENSIPUG00000011498	zgc:56699	62	35.714	ENSEBUG00000005577	-	62	35.714	Eptatretus_burgeri
ENSIPUG00000011498	zgc:56699	96	50.000	ENSELUG00000003242	gtsf1	100	50.000	Esox_lucius
ENSIPUG00000011498	zgc:56699	94	48.023	ENSFHEG00000006036	zgc:56699	94	42.286	Fundulus_heteroclitus
ENSIPUG00000011498	zgc:56699	78	43.448	ENSGMOG00000007295	zgc:56699	98	43.243	Gadus_morhua
ENSIPUG00000011498	zgc:56699	63	43.548	ENSGALG00000035365	-	70	43.548	Gallus_gallus
ENSIPUG00000011498	zgc:56699	95	48.619	ENSGAFG00000020743	zgc:56699	97	48.619	Gambusia_affinis
ENSIPUG00000011498	zgc:56699	95	45.556	ENSHBUG00000005327	zgc:56699	97	45.556	Haplochromis_burtoni
ENSIPUG00000011498	zgc:56699	95	45.810	ENSHCOG00000010296	-	100	45.810	Hippocampus_comes
ENSIPUG00000011498	zgc:56699	95	51.136	ENSLBEG00000015981	zgc:56699	99	44.000	Labrus_bergylta
ENSIPUG00000011498	zgc:56699	79	45.638	ENSLOCG00000004469	zgc:56699	99	46.358	Lepisosteus_oculatus
ENSIPUG00000011498	zgc:56699	95	47.486	ENSMAMG00000001846	zgc:56699	97	47.486	Mastacembelus_armatus
ENSIPUG00000011498	zgc:56699	98	44.624	ENSMZEG00005026479	zgc:56699	92	44.624	Maylandia_zebra
ENSIPUG00000011498	zgc:56699	95	38.587	ENSMMOG00000017331	zgc:56699	97	38.378	Mola_mola
ENSIPUG00000011498	zgc:56699	95	45.556	ENSNBRG00000006336	zgc:56699	97	45.556	Neolamprologus_brichardi
ENSIPUG00000011498	zgc:56699	95	46.111	ENSONIG00000016720	zgc:56699	89	46.111	Oreochromis_niloticus
ENSIPUG00000011498	zgc:56699	58	38.136	ENSOANG00000030381	-	73	38.136	Ornithorhynchus_anatinus
ENSIPUG00000011498	zgc:56699	74	45.070	ENSORLG00000025877	-	83	45.070	Oryzias_latipes
ENSIPUG00000011498	zgc:56699	95	44.134	ENSORLG00000015258	-	96	44.134	Oryzias_latipes
ENSIPUG00000011498	zgc:56699	95	44.134	ENSORLG00020010990	-	96	44.134	Oryzias_latipes_hni
ENSIPUG00000011498	zgc:56699	74	45.070	ENSORLG00020011013	-	83	45.070	Oryzias_latipes_hni
ENSIPUG00000011498	zgc:56699	95	43.646	ENSORLG00015004961	zgc:56699	96	44.134	Oryzias_latipes_hsok
ENSIPUG00000011498	zgc:56699	93	48.571	ENSOMEG00000021739	-	96	47.486	Oryzias_melastigma
ENSIPUG00000011498	zgc:56699	95	41.573	ENSOMEG00000021773	-	96	41.573	Oryzias_melastigma
ENSIPUG00000011498	zgc:56699	75	49.640	ENSOMEG00000013200	-	88	49.640	Oryzias_melastigma
ENSIPUG00000011498	zgc:56699	96	48.333	ENSPKIG00000017039	zgc:56699	100	48.333	Paramormyrops_kingsleyae
ENSIPUG00000011498	zgc:56699	95	42.703	ENSPMGG00000023241	zgc:56699	96	42.703	Periophthalmus_magnuspinnatus
ENSIPUG00000011498	zgc:56699	60	38.525	ENSPMAG00000009653	-	93	38.525	Petromyzon_marinus
ENSIPUG00000011498	zgc:56699	95	49.162	ENSPFOG00000009204	zgc:56699	97	49.162	Poecilia_formosa
ENSIPUG00000011498	zgc:56699	95	45.763	ENSPLAG00000009088	zgc:56699	97	45.763	Poecilia_latipinna
ENSIPUG00000011498	zgc:56699	95	49.162	ENSPMEG00000001443	zgc:56699	97	49.162	Poecilia_mexicana
ENSIPUG00000011498	zgc:56699	95	48.045	ENSPREG00000000745	zgc:56699	97	48.045	Poecilia_reticulata
ENSIPUG00000011498	zgc:56699	95	45.556	ENSPNYG00000002811	zgc:56699	97	45.556	Pundamilia_nyererei
ENSIPUG00000011498	zgc:56699	96	61.878	ENSPNAG00000005165	zgc:56699	100	61.878	Pygocentrus_nattereri
ENSIPUG00000011498	zgc:56699	95	44.382	ENSSFOG00015021600	zgc:56699	98	44.382	Scleropages_formosus
ENSIPUG00000011498	zgc:56699	95	46.893	ENSSMAG00000020886	zgc:56699	96	46.893	Scophthalmus_maximus
ENSIPUG00000011498	zgc:56699	95	50.838	ENSSDUG00000002033	zgc:56699	96	50.838	Seriola_dumerili
ENSIPUG00000011498	zgc:56699	95	50.279	ENSSLDG00000014113	zgc:56699	96	50.279	Seriola_lalandi_dorsalis
ENSIPUG00000011498	zgc:56699	79	58.000	ENSSPAG00000010005	-	96	58.000	Stegastes_partitus
ENSIPUG00000011498	zgc:56699	96	48.315	ENSSPAG00000019854	-	99	49.438	Stegastes_partitus
ENSIPUG00000011498	zgc:56699	95	40.449	ENSTRUG00000015537	zgc:56699	97	40.449	Takifugu_rubripes
ENSIPUG00000011498	zgc:56699	79	43.624	ENSTNIG00000012515	zgc:56699	97	43.624	Tetraodon_nigroviridis
ENSIPUG00000011498	zgc:56699	95	45.198	ENSXCOG00000014400	zgc:56699	86	45.198	Xiphophorus_couchianus
ENSIPUG00000011498	zgc:56699	95	49.162	ENSXMAG00000011692	zgc:56699	97	49.162	Xiphophorus_maculatus