EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000011603 (Gene tree)
Gene ID: 108273304
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10176 bases
Position: chr12:17258378-17268553
Accession: 108273304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000017127	SF3a60_bindingd	PF12108.8	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017855	-	2621	XM_017482468	ENSIPUP00000017127	501 (aa)	XP_017337957	A0A2D0S5F8

Gene Model

Click here to download ENSIPUG00000011603's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011603	sf3a3	100	90.419	ENSG00000183431	SF3A3	100	90.419	Homo_sapiens
ENSIPUG00000011603	sf3a3	100	93.214	ENSAPOG00000015608	sf3a3	100	93.214	Acanthochromis_polyacanthus
ENSIPUG00000011603	sf3a3	100	90.419	ENSAMEG00000001262	SF3A3	100	90.419	Ailuropoda_melanoleuca
ENSIPUG00000011603	sf3a3	95	87.179	ENSACIG00000009061	sf3a3	99	87.179	Amphilophus_citrinellus
ENSIPUG00000011603	sf3a3	100	93.214	ENSAOCG00000013954	sf3a3	100	93.214	Amphiprion_ocellaris
ENSIPUG00000011603	sf3a3	100	93.214	ENSAPEG00000007297	sf3a3	100	93.214	Amphiprion_percula
ENSIPUG00000011603	sf3a3	100	94.212	ENSATEG00000008754	sf3a3	100	94.212	Anabas_testudineus
ENSIPUG00000011603	sf3a3	94	91.898	ENSAPLG00000014900	SF3A3	100	91.898	Anas_platyrhynchos
ENSIPUG00000011603	sf3a3	100	90.020	ENSACAG00000017058	SF3A3	100	90.020	Anolis_carolinensis
ENSIPUG00000011603	sf3a3	100	70.259	ENSANAG00000036903	-	100	70.259	Aotus_nancymaae
ENSIPUG00000011603	sf3a3	99	87.550	ENSANAG00000014878	SF3A3	100	87.550	Aotus_nancymaae
ENSIPUG00000011603	sf3a3	100	93.413	ENSACLG00000017977	sf3a3	100	93.413	Astatotilapia_calliptera
ENSIPUG00000011603	sf3a3	100	96.008	ENSAMXG00000016855	sf3a3	87	96.008	Astyanax_mexicanus
ENSIPUG00000011603	sf3a3	100	90.419	ENSBTAG00000007299	SF3A3	100	90.419	Bos_taurus
ENSIPUG00000011603	sf3a3	100	51.491	WBGene00011758	T13H5.4	100	51.491	Caenorhabditis_elegans
ENSIPUG00000011603	sf3a3	100	90.419	ENSCJAG00000002176	SF3A3	100	90.419	Callithrix_jacchus
ENSIPUG00000011603	sf3a3	100	90.419	ENSCAFG00000000683	-	100	90.419	Canis_familiaris
ENSIPUG00000011603	sf3a3	100	90.419	ENSCAFG00000003222	-	100	90.419	Canis_familiaris
ENSIPUG00000011603	sf3a3	100	90.419	ENSCAFG00020006186	SF3A3	100	90.419	Canis_lupus_dingo
ENSIPUG00000011603	sf3a3	100	90.419	ENSCHIG00000020638	SF3A3	100	90.419	Capra_hircus
ENSIPUG00000011603	sf3a3	100	84.232	ENSTSYG00000008417	SF3A3	100	84.232	Carlito_syrichta
ENSIPUG00000011603	sf3a3	85	59.039	ENSCAPG00000003466	SF3A3	100	56.751	Cavia_aperea
ENSIPUG00000011603	sf3a3	100	90.619	ENSCPOG00000008660	SF3A3	100	90.619	Cavia_porcellus
ENSIPUG00000011603	sf3a3	100	65.408	ENSCCAG00000034048	-	100	62.823	Cebus_capucinus
ENSIPUG00000011603	sf3a3	100	90.419	ENSCCAG00000033732	SF3A3	100	90.419	Cebus_capucinus
ENSIPUG00000011603	sf3a3	100	90.419	ENSCATG00000043496	SF3A3	100	90.419	Cercocebus_atys
ENSIPUG00000011603	sf3a3	100	67.729	ENSCATG00000043537	-	100	68.127	Cercocebus_atys
ENSIPUG00000011603	sf3a3	94	72.495	ENSCATG00000041660	-	100	73.987	Cercocebus_atys
ENSIPUG00000011603	sf3a3	100	90.419	ENSCLAG00000010838	SF3A3	100	90.419	Chinchilla_lanigera
ENSIPUG00000011603	sf3a3	95	89.916	ENSCSAG00000001120	SF3A3	100	89.916	Chlorocebus_sabaeus
ENSIPUG00000011603	sf3a3	78	85.185	ENSCHOG00000006849	SF3A3	79	85.185	Choloepus_hoffmanni
ENSIPUG00000011603	sf3a3	100	81.836	ENSCPBG00000018291	-	100	81.836	Chrysemys_picta_bellii
ENSIPUG00000011603	sf3a3	70	62.707	ENSCPBG00000007472	-	95	62.707	Chrysemys_picta_bellii
ENSIPUG00000011603	sf3a3	100	68.924	ENSCING00000002730	-	100	68.924	Ciona_intestinalis
ENSIPUG00000011603	sf3a3	100	67.465	ENSCSAVG00000005063	-	100	67.465	Ciona_savignyi
ENSIPUG00000011603	sf3a3	100	90.419	ENSCANG00000042083	SF3A3	100	90.419	Colobus_angolensis_palliatus
ENSIPUG00000011603	sf3a3	100	64.870	ENSCANG00000035535	-	100	64.870	Colobus_angolensis_palliatus
ENSIPUG00000011603	sf3a3	100	90.619	ENSCGRG00001011320	Sf3a3	100	90.619	Cricetulus_griseus_chok1gshd
ENSIPUG00000011603	sf3a3	100	90.619	ENSCGRG00000012156	Sf3a3	100	90.619	Cricetulus_griseus_crigri
ENSIPUG00000011603	sf3a3	100	92.615	ENSCSEG00000010401	sf3a3	100	92.615	Cynoglossus_semilaevis
ENSIPUG00000011603	sf3a3	94	91.898	ENSCVAG00000010239	sf3a3	95	91.898	Cyprinodon_variegatus
ENSIPUG00000011603	sf3a3	100	93.812	ENSDARG00000100114	sf3a3	100	94.749	Danio_rerio
ENSIPUG00000011603	sf3a3	91	90.153	ENSDNOG00000046628	SF3A3	99	90.153	Dasypus_novemcinctus
ENSIPUG00000011603	sf3a3	100	90.619	ENSDORG00000008798	Sf3a3	100	90.619	Dipodomys_ordii
ENSIPUG00000011603	sf3a3	100	64.032	FBgn0014366	noi	100	63.834	Drosophila_melanogaster
ENSIPUG00000011603	sf3a3	100	78.529	ENSEBUG00000015411	sf3a3	92	78.926	Eptatretus_burgeri
ENSIPUG00000011603	sf3a3	100	90.419	ENSEASG00005012906	SF3A3	100	90.419	Equus_asinus_asinus
ENSIPUG00000011603	sf3a3	100	90.419	ENSECAG00000017333	SF3A3	100	90.419	Equus_caballus
ENSIPUG00000011603	sf3a3	100	91.218	ENSELUG00000010024	sf3a3	100	91.218	Esox_lucius
ENSIPUG00000011603	sf3a3	100	90.419	ENSFCAG00000027772	SF3A3	100	90.419	Felis_catus
ENSIPUG00000011603	sf3a3	100	91.018	ENSFALG00000001003	SF3A3	100	91.018	Ficedula_albicollis
ENSIPUG00000011603	sf3a3	100	90.619	ENSFDAG00000020908	SF3A3	100	90.619	Fukomys_damarensis
ENSIPUG00000011603	sf3a3	100	92.814	ENSFHEG00000019107	sf3a3	100	92.814	Fundulus_heteroclitus
ENSIPUG00000011603	sf3a3	100	91.617	ENSGMOG00000015540	sf3a3	100	91.617	Gadus_morhua
ENSIPUG00000011603	sf3a3	100	91.018	ENSGALG00000001540	SF3A3	100	91.018	Gallus_gallus
ENSIPUG00000011603	sf3a3	100	92.016	ENSGAFG00000002320	sf3a3	100	92.016	Gambusia_affinis
ENSIPUG00000011603	sf3a3	100	93.413	ENSGACG00000007842	sf3a3	100	93.413	Gasterosteus_aculeatus
ENSIPUG00000011603	sf3a3	100	90.020	ENSGAGG00000014980	SF3A3	100	90.020	Gopherus_agassizii
ENSIPUG00000011603	sf3a3	100	90.419	ENSGGOG00000013928	SF3A3	100	90.419	Gorilla_gorilla
ENSIPUG00000011603	sf3a3	100	70.459	ENSGGOG00000022611	-	100	69.860	Gorilla_gorilla
ENSIPUG00000011603	sf3a3	100	93.413	ENSHBUG00000018158	sf3a3	100	93.640	Haplochromis_burtoni
ENSIPUG00000011603	sf3a3	100	90.619	ENSHGLG00000012502	SF3A3	100	90.619	Heterocephalus_glaber_female
ENSIPUG00000011603	sf3a3	100	90.619	ENSHGLG00100010546	SF3A3	100	90.619	Heterocephalus_glaber_male
ENSIPUG00000011603	sf3a3	100	92.216	ENSHCOG00000015109	sf3a3	100	92.216	Hippocampus_comes
ENSIPUG00000011603	sf3a3	100	90.419	ENSSTOG00000001691	SF3A3	100	90.419	Ictidomys_tridecemlineatus
ENSIPUG00000011603	sf3a3	100	90.818	ENSJJAG00000012404	Sf3a3	100	90.818	Jaculus_jaculus
ENSIPUG00000011603	sf3a3	100	93.214	ENSKMAG00000007632	sf3a3	100	93.214	Kryptolebias_marmoratus
ENSIPUG00000011603	sf3a3	100	85.657	ENSLBEG00000000816	sf3a3	100	85.657	Labrus_bergylta
ENSIPUG00000011603	sf3a3	100	93.214	ENSLOCG00000003273	sf3a3	100	93.214	Lepisosteus_oculatus
ENSIPUG00000011603	sf3a3	100	79.242	ENSLAFG00000008094	SF3A3	100	79.242	Loxodonta_africana
ENSIPUG00000011603	sf3a3	94	72.068	ENSMFAG00000036706	-	100	73.774	Macaca_fascicularis
ENSIPUG00000011603	sf3a3	100	90.419	ENSMFAG00000043047	SF3A3	100	90.419	Macaca_fascicularis
ENSIPUG00000011603	sf3a3	100	90.419	ENSMMUG00000023199	SF3A3	100	90.419	Macaca_mulatta
ENSIPUG00000011603	sf3a3	100	70.518	ENSMMUG00000038820	-	100	72.112	Macaca_mulatta
ENSIPUG00000011603	sf3a3	100	90.419	ENSMNEG00000044291	SF3A3	100	90.419	Macaca_nemestrina
ENSIPUG00000011603	sf3a3	94	70.362	ENSMNEG00000028686	-	100	72.068	Macaca_nemestrina
ENSIPUG00000011603	sf3a3	100	74.651	ENSMLEG00000036714	-	100	76.048	Mandrillus_leucophaeus
ENSIPUG00000011603	sf3a3	100	90.419	ENSMLEG00000030641	SF3A3	100	90.419	Mandrillus_leucophaeus
ENSIPUG00000011603	sf3a3	100	67.131	ENSMLEG00000028631	-	100	67.530	Mandrillus_leucophaeus
ENSIPUG00000011603	sf3a3	100	94.411	ENSMAMG00000001942	sf3a3	100	94.411	Mastacembelus_armatus
ENSIPUG00000011603	sf3a3	100	93.413	ENSMZEG00005016987	sf3a3	100	93.413	Maylandia_zebra
ENSIPUG00000011603	sf3a3	100	86.282	ENSMGAG00000002875	SF3A3	100	86.282	Meleagris_gallopavo
ENSIPUG00000011603	sf3a3	91	87.773	ENSMICG00000026541	-	100	87.773	Microcebus_murinus
ENSIPUG00000011603	sf3a3	100	86.228	ENSMICG00000001485	-	100	86.228	Microcebus_murinus
ENSIPUG00000011603	sf3a3	100	84.631	ENSMICG00000043548	-	100	84.631	Microcebus_murinus
ENSIPUG00000011603	sf3a3	100	87.425	ENSMOCG00000019939	-	100	87.425	Microtus_ochrogaster
ENSIPUG00000011603	sf3a3	95	85.053	ENSMOCG00000014565	-	97	84.000	Microtus_ochrogaster
ENSIPUG00000011603	sf3a3	100	93.014	ENSMMOG00000014307	sf3a3	100	93.014	Mola_mola
ENSIPUG00000011603	sf3a3	100	83.633	ENSMODG00000024045	-	100	83.633	Monodelphis_domestica
ENSIPUG00000011603	sf3a3	100	71.262	ENSMODG00000017729	-	100	70.463	Monodelphis_domestica
ENSIPUG00000011603	sf3a3	100	92.814	ENSMALG00000004836	sf3a3	100	93.202	Monopterus_albus
ENSIPUG00000011603	sf3a3	100	90.619	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.619	Mus_caroli
ENSIPUG00000011603	sf3a3	100	90.619	ENSMUSG00000028902	Sf3a3	100	90.619	Mus_musculus
ENSIPUG00000011603	sf3a3	100	85.030	MGP_PahariEiJ_G0028780	Sf3a3	100	85.030	Mus_pahari
ENSIPUG00000011603	sf3a3	100	90.619	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.619	Mus_spretus
ENSIPUG00000011603	sf3a3	100	90.419	ENSMLUG00000000991	SF3A3	100	90.419	Myotis_lucifugus
ENSIPUG00000011603	sf3a3	100	84.631	ENSNGAG00000018032	Sf3a3	100	84.631	Nannospalax_galili
ENSIPUG00000011603	sf3a3	100	82.834	ENSNLEG00000011720	SF3A3	100	82.834	Nomascus_leucogenys
ENSIPUG00000011603	sf3a3	100	90.619	ENSOPRG00000012785	SF3A3	100	90.619	Ochotona_princeps
ENSIPUG00000011603	sf3a3	100	85.230	ENSODEG00000006854	-	100	87.625	Octodon_degus
ENSIPUG00000011603	sf3a3	100	86.028	ENSODEG00000007470	-	100	86.028	Octodon_degus
ENSIPUG00000011603	sf3a3	100	76.494	ENSODEG00000000937	-	100	78.884	Octodon_degus
ENSIPUG00000011603	sf3a3	100	79.441	ENSODEG00000018393	-	100	79.242	Octodon_degus
ENSIPUG00000011603	sf3a3	87	93.563	ENSONIG00000010296	sf3a3	100	93.563	Oreochromis_niloticus
ENSIPUG00000011603	sf3a3	94	90.832	ENSOANG00000002473	SF3A3	100	90.832	Ornithorhynchus_anatinus
ENSIPUG00000011603	sf3a3	100	90.619	ENSOCUG00000005407	SF3A3	100	90.619	Oryctolagus_cuniculus
ENSIPUG00000011603	sf3a3	100	92.415	ENSORLG00000008175	sf3a3	100	92.415	Oryzias_latipes
ENSIPUG00000011603	sf3a3	100	92.216	ENSORLG00020013708	sf3a3	100	92.216	Oryzias_latipes_hni
ENSIPUG00000011603	sf3a3	100	92.016	ENSORLG00015004104	sf3a3	100	92.016	Oryzias_latipes_hsok
ENSIPUG00000011603	sf3a3	100	92.216	ENSOMEG00000020177	sf3a3	100	92.216	Oryzias_melastigma
ENSIPUG00000011603	sf3a3	100	90.419	ENSOARG00000019950	SF3A3	100	90.419	Ovis_aries
ENSIPUG00000011603	sf3a3	100	70.060	ENSPPAG00000039955	-	100	69.461	Pan_paniscus
ENSIPUG00000011603	sf3a3	100	90.419	ENSPPAG00000034066	SF3A3	100	90.419	Pan_paniscus
ENSIPUG00000011603	sf3a3	100	90.419	ENSPPRG00000001258	SF3A3	100	90.419	Panthera_pardus
ENSIPUG00000011603	sf3a3	100	90.419	ENSPTIG00000007515	SF3A3	100	90.419	Panthera_tigris_altaica
ENSIPUG00000011603	sf3a3	100	90.419	ENSPTRG00000000559	SF3A3	100	90.419	Pan_troglodytes
ENSIPUG00000011603	sf3a3	100	70.459	ENSPTRG00000046013	-	100	69.860	Pan_troglodytes
ENSIPUG00000011603	sf3a3	87	80.682	ENSPANG00000031214	-	100	66.068	Papio_anubis
ENSIPUG00000011603	sf3a3	100	77.246	ENSPANG00000029393	-	100	78.643	Papio_anubis
ENSIPUG00000011603	sf3a3	100	90.419	ENSPANG00000021859	SF3A3	100	90.419	Papio_anubis
ENSIPUG00000011603	sf3a3	100	93.413	ENSPKIG00000004719	sf3a3	100	93.413	Paramormyrops_kingsleyae
ENSIPUG00000011603	sf3a3	100	87.873	ENSPSIG00000004273	SF3A3	100	87.873	Pelodiscus_sinensis
ENSIPUG00000011603	sf3a3	91	92.779	ENSPMGG00000003610	sf3a3	94	92.779	Periophthalmus_magnuspinnatus
ENSIPUG00000011603	sf3a3	100	90.619	ENSPEMG00000020805	Sf3a3	100	90.619	Peromyscus_maniculatus_bairdii
ENSIPUG00000011603	sf3a3	54	75.556	ENSPMAG00000001044	sf3a3	98	75.556	Petromyzon_marinus
ENSIPUG00000011603	sf3a3	100	90.419	ENSPCIG00000025719	SF3A3	100	90.419	Phascolarctos_cinereus
ENSIPUG00000011603	sf3a3	100	92.016	ENSPFOG00000005284	sf3a3	100	92.016	Poecilia_formosa
ENSIPUG00000011603	sf3a3	99	88.732	ENSPLAG00000003979	sf3a3	92	88.732	Poecilia_latipinna
ENSIPUG00000011603	sf3a3	78	86.514	ENSPMEG00000021132	sf3a3	88	86.514	Poecilia_mexicana
ENSIPUG00000011603	sf3a3	100	92.216	ENSPREG00000013802	sf3a3	100	92.216	Poecilia_reticulata
ENSIPUG00000011603	sf3a3	100	87.824	ENSPPYG00000001519	SF3A3	100	87.824	Pongo_abelii
ENSIPUG00000011603	sf3a3	100	84.431	ENSPCAG00000010734	SF3A3	100	84.431	Procavia_capensis
ENSIPUG00000011603	sf3a3	100	74.651	ENSPCOG00000017131	-	100	74.651	Propithecus_coquereli
ENSIPUG00000011603	sf3a3	100	79.762	ENSPCOG00000020389	-	100	79.762	Propithecus_coquereli
ENSIPUG00000011603	sf3a3	100	78.643	ENSPVAG00000010158	SF3A3	100	78.643	Pteropus_vampyrus
ENSIPUG00000011603	sf3a3	100	93.413	ENSPNYG00000000786	sf3a3	100	93.413	Pundamilia_nyererei
ENSIPUG00000011603	sf3a3	100	96.407	ENSPNAG00000010298	sf3a3	100	96.407	Pygocentrus_nattereri
ENSIPUG00000011603	sf3a3	100	90.619	ENSRNOG00000007629	Sf3a3	100	90.619	Rattus_norvegicus
ENSIPUG00000011603	sf3a3	100	90.419	ENSRBIG00000043567	SF3A3	100	90.419	Rhinopithecus_bieti
ENSIPUG00000011603	sf3a3	100	66.467	ENSRBIG00000043833	-	100	66.467	Rhinopithecus_bieti
ENSIPUG00000011603	sf3a3	100	67.665	ENSRBIG00000041123	-	100	67.665	Rhinopithecus_bieti
ENSIPUG00000011603	sf3a3	100	90.419	ENSRROG00000033888	SF3A3	100	90.419	Rhinopithecus_roxellana
ENSIPUG00000011603	sf3a3	94	71.642	ENSRROG00000032346	-	100	71.642	Rhinopithecus_roxellana
ENSIPUG00000011603	sf3a3	100	65.868	ENSSBOG00000026932	-	100	65.269	Saimiri_boliviensis_boliviensis
ENSIPUG00000011603	sf3a3	89	88.119	ENSSBOG00000032688	SF3A3	100	88.119	Saimiri_boliviensis_boliviensis
ENSIPUG00000011603	sf3a3	90	91.170	ENSSHAG00000014530	SF3A3	100	91.170	Sarcophilus_harrisii
ENSIPUG00000011603	sf3a3	100	93.812	ENSSFOG00015005975	sf3a3	100	93.812	Scleropages_formosus
ENSIPUG00000011603	sf3a3	100	93.413	ENSSMAG00000020213	sf3a3	100	93.413	Scophthalmus_maximus
ENSIPUG00000011603	sf3a3	100	89.820	ENSSDUG00000011590	sf3a3	100	89.820	Seriola_dumerili
ENSIPUG00000011603	sf3a3	100	93.812	ENSSLDG00000020635	sf3a3	100	93.812	Seriola_lalandi_dorsalis
ENSIPUG00000011603	sf3a3	100	90.220	ENSSPUG00000004010	SF3A3	100	90.220	Sphenodon_punctatus
ENSIPUG00000011603	sf3a3	100	93.214	ENSSPAG00000018653	sf3a3	100	93.214	Stegastes_partitus
ENSIPUG00000011603	sf3a3	100	90.419	ENSSSCG00000003643	SF3A3	100	90.419	Sus_scrofa
ENSIPUG00000011603	sf3a3	87	91.954	ENSTGUG00000001466	SF3A3	100	91.743	Taeniopygia_guttata
ENSIPUG00000011603	sf3a3	100	92.814	ENSTRUG00000009089	sf3a3	100	92.814	Takifugu_rubripes
ENSIPUG00000011603	sf3a3	100	92.247	ENSTNIG00000009800	sf3a3	100	92.247	Tetraodon_nigroviridis
ENSIPUG00000011603	sf3a3	100	79.441	ENSTBEG00000007614	SF3A3	100	79.441	Tupaia_belangeri
ENSIPUG00000011603	sf3a3	100	90.220	ENSTTRG00000013519	SF3A3	100	90.220	Tursiops_truncatus
ENSIPUG00000011603	sf3a3	100	90.419	ENSUAMG00000006134	SF3A3	100	90.419	Ursus_americanus
ENSIPUG00000011603	sf3a3	100	90.419	ENSUMAG00000021250	SF3A3	100	90.419	Ursus_maritimus
ENSIPUG00000011603	sf3a3	66	93.023	ENSVPAG00000004778	SF3A3	73	93.023	Vicugna_pacos
ENSIPUG00000011603	sf3a3	100	86.627	ENSVVUG00000022908	SF3A3	100	86.627	Vulpes_vulpes
ENSIPUG00000011603	sf3a3	100	88.024	ENSXETG00000022923	sf3a3	100	88.024	Xenopus_tropicalis
ENSIPUG00000011603	sf3a3	100	92.016	ENSXMAG00000017165	sf3a3	100	92.016	Xiphophorus_maculatus