EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000011609 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4363 bases
Position: chr27:16230611-16234973
Accession: 108259451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000017146	MMR_HSR1	PF01926.23	8.1e-09	1	1
ENSIPUP00000017139	MMR_HSR1	PF01926.23	8.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000017865	SRL (1 of many)-201	1371	-	ENSIPUP00000017139	456 (aa)	-	-
ENSIPUT00000017874	SRL (1 of many)-202	1356	XM_017458977	ENSIPUP00000017146	451 (aa)	XP_017314466	-

Gene Model

Click here to download ENSIPUG00000011609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000011609	SRL	95	69.954	ENSIPUG00000012513	srl	93	69.954
ENSIPUG00000011609	SRL	64	35.354	ENSIPUG00000000204	Ehd2	54	35.959
ENSIPUG00000011609	SRL	87	30.827	ENSIPUG00000002819	ehd1a	72	30.827
ENSIPUG00000011609	SRL	87	30.075	ENSIPUG00000017390	EHD1	72	30.075
ENSIPUG00000011609	SRL	79	33.791	ENSIPUG00000018207	ehd4	63	33.983
ENSIPUG00000011609	SRL	89	30.318	ENSIPUG00000024057	ehd2a	72	30.318
ENSIPUG00000011609	SRL	81	31.536	ENSIPUG00000004603	Ehd3	70	31.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011609	SRL	95	69.037	ENSG00000185739	SRL	97	70.883	Homo_sapiens
ENSIPUG00000011609	SRL	95	70.413	ENSAPOG00000018093	srl	98	70.345	Acanthochromis_polyacanthus
ENSIPUG00000011609	SRL	100	72.271	ENSAPOG00000012432	SRL	98	71.616	Acanthochromis_polyacanthus
ENSIPUG00000011609	SRL	100	71.397	ENSACIG00000015419	SRL	98	71.397	Amphilophus_citrinellus
ENSIPUG00000011609	SRL	95	70.183	ENSACIG00000015799	srl	97	70.183	Amphilophus_citrinellus
ENSIPUG00000011609	SRL	100	71.397	ENSAOCG00000017049	SRL	96	71.834	Amphiprion_ocellaris
ENSIPUG00000011609	SRL	93	70.023	ENSAOCG00000007574	srl	98	70.023	Amphiprion_ocellaris
ENSIPUG00000011609	SRL	95	70.183	ENSAPEG00000006911	srl	93	70.183	Amphiprion_percula
ENSIPUG00000011609	SRL	84	77.143	ENSAPEG00000006533	SRL	96	68.996	Amphiprion_percula
ENSIPUG00000011609	SRL	95	70.183	ENSATEG00000024315	srl	93	70.183	Anabas_testudineus
ENSIPUG00000011609	SRL	100	71.834	ENSATEG00000009643	SRL	52	72.113	Anabas_testudineus
ENSIPUG00000011609	SRL	91	70.492	ENSACAG00000016380	SRL	78	70.492	Anolis_carolinensis
ENSIPUG00000011609	SRL	100	70.524	ENSACLG00000024674	SRL	57	70.742	Astatotilapia_calliptera
ENSIPUG00000011609	SRL	95	70.183	ENSACLG00000027685	srl	96	70.183	Astatotilapia_calliptera
ENSIPUG00000011609	SRL	92	79.524	ENSAMXG00000038693	SRL	100	77.293	Astyanax_mexicanus
ENSIPUG00000011609	SRL	95	69.495	ENSAMXG00000018789	srl	85	69.495	Astyanax_mexicanus
ENSIPUG00000011609	SRL	89	71.990	ENSBTAG00000001078	SRL	55	70.183	Bos_taurus
ENSIPUG00000011609	SRL	95	68.807	ENSCJAG00000019750	SRL	92	69.954	Callithrix_jacchus
ENSIPUG00000011609	SRL	89	71.990	ENSCAFG00000019233	SRL	81	70.183	Canis_familiaris
ENSIPUG00000011609	SRL	89	71.990	ENSCAFG00020025024	SRL	54	70.183	Canis_lupus_dingo
ENSIPUG00000011609	SRL	89	71.990	ENSCHIG00000017927	SRL	54	70.183	Capra_hircus
ENSIPUG00000011609	SRL	95	69.495	ENSTSYG00000007919	SRL	97	71.122	Carlito_syrichta
ENSIPUG00000011609	SRL	95	69.495	ENSCPOG00000012643	SRL	92	70.642	Cavia_porcellus
ENSIPUG00000011609	SRL	95	64.908	ENSCCAG00000032646	SRL	98	72.118	Cebus_capucinus
ENSIPUG00000011609	SRL	95	69.037	ENSCATG00000032227	-	92	70.183	Cercocebus_atys
ENSIPUG00000011609	SRL	95	69.266	ENSCLAG00000016242	SRL	92	70.413	Chinchilla_lanigera
ENSIPUG00000011609	SRL	76	73.219	ENSCHOG00000001618	SRL	52	71.053	Choloepus_hoffmanni
ENSIPUG00000011609	SRL	90	73.961	ENSCPBG00000026371	SRL	88	69.789	Chrysemys_picta_bellii
ENSIPUG00000011609	SRL	91	55.609	ENSCING00000005231	-	94	55.609	Ciona_intestinalis
ENSIPUG00000011609	SRL	95	69.037	ENSCANG00000035872	SRL	97	70.883	Colobus_angolensis_palliatus
ENSIPUG00000011609	SRL	95	69.037	ENSCGRG00001016630	Srl	92	70.183	Cricetulus_griseus_chok1gshd
ENSIPUG00000011609	SRL	95	69.037	ENSCGRG00000005458	Srl	92	70.183	Cricetulus_griseus_crigri
ENSIPUG00000011609	SRL	95	69.954	ENSCSEG00000016151	srl	93	69.954	Cynoglossus_semilaevis
ENSIPUG00000011609	SRL	90	73.671	ENSCSEG00000011866	SRL	89	68.777	Cynoglossus_semilaevis
ENSIPUG00000011609	SRL	95	70.642	ENSCVAG00000003513	srl	94	70.642	Cyprinodon_variegatus
ENSIPUG00000011609	SRL	100	71.397	ENSCVAG00000022465	SRL	60	71.397	Cyprinodon_variegatus
ENSIPUG00000011609	SRL	95	70.413	ENSDARG00000104587	srl	93	70.413	Danio_rerio
ENSIPUG00000011609	SRL	86	72.911	ENSDARG00000112959	CABZ01072309.1	100	72.911	Danio_rerio
ENSIPUG00000011609	SRL	89	71.990	ENSDNOG00000011643	SRL	52	70.183	Dasypus_novemcinctus
ENSIPUG00000011609	SRL	95	69.037	ENSDORG00000014807	Srl	92	70.183	Dipodomys_ordii
ENSIPUG00000011609	SRL	78	64.957	ENSEBUG00000015937	srl	90	64.957	Eptatretus_burgeri
ENSIPUG00000011609	SRL	89	71.253	ENSEASG00005000942	SRL	52	69.495	Equus_asinus_asinus
ENSIPUG00000011609	SRL	95	68.349	ENSECAG00000024219	SRL	92	69.495	Equus_caballus
ENSIPUG00000011609	SRL	95	68.889	ENSELUG00000015616	srl	92	68.889	Esox_lucius
ENSIPUG00000011609	SRL	95	69.037	ENSFCAG00000022075	SRL	92	70.183	Felis_catus
ENSIPUG00000011609	SRL	92	70.922	ENSFALG00000004328	SRL	60	70.922	Ficedula_albicollis
ENSIPUG00000011609	SRL	95	69.266	ENSFDAG00000006199	SRL	92	70.413	Fukomys_damarensis
ENSIPUG00000011609	SRL	95	70.183	ENSFHEG00000011239	srl	94	70.183	Fundulus_heteroclitus
ENSIPUG00000011609	SRL	100	71.397	ENSFHEG00000011854	SRL	98	70.742	Fundulus_heteroclitus
ENSIPUG00000011609	SRL	96	68.805	ENSGMOG00000014954	srl	99	68.805	Gadus_morhua
ENSIPUG00000011609	SRL	92	70.213	ENSGALG00000038884	SRL	89	70.213	Gallus_gallus
ENSIPUG00000011609	SRL	100	71.397	ENSGAFG00000016984	SRL	98	70.524	Gambusia_affinis
ENSIPUG00000011609	SRL	95	70.872	ENSGAFG00000000010	srl	95	70.872	Gambusia_affinis
ENSIPUG00000011609	SRL	95	68.304	ENSGACG00000011332	srl	98	68.304	Gasterosteus_aculeatus
ENSIPUG00000011609	SRL	95	69.037	ENSGGOG00000011312	-	92	70.183	Gorilla_gorilla
ENSIPUG00000011609	SRL	100	70.742	ENSHBUG00000015710	SRL	57	70.961	Haplochromis_burtoni
ENSIPUG00000011609	SRL	95	70.183	ENSHBUG00000007581	srl	96	70.183	Haplochromis_burtoni
ENSIPUG00000011609	SRL	95	69.266	ENSHGLG00000015271	SRL	92	70.413	Heterocephalus_glaber_female
ENSIPUG00000011609	SRL	95	69.266	ENSHGLG00100019378	SRL	92	70.413	Heterocephalus_glaber_male
ENSIPUG00000011609	SRL	100	72.707	ENSHCOG00000001012	SRL	50	72.707	Hippocampus_comes
ENSIPUG00000011609	SRL	95	69.954	ENSHCOG00000008687	srl	97	69.954	Hippocampus_comes
ENSIPUG00000011609	SRL	95	69.495	ENSSTOG00000021151	-	92	70.642	Ictidomys_tridecemlineatus
ENSIPUG00000011609	SRL	95	69.725	ENSJJAG00000016400	Srl	92	70.872	Jaculus_jaculus
ENSIPUG00000011609	SRL	100	72.052	ENSKMAG00000019537	SRL	100	71.335	Kryptolebias_marmoratus
ENSIPUG00000011609	SRL	92	71.667	ENSKMAG00000014115	srl	96	69.037	Kryptolebias_marmoratus
ENSIPUG00000011609	SRL	95	70.183	ENSLBEG00000026643	srl	93	70.183	Labrus_bergylta
ENSIPUG00000011609	SRL	99	69.803	ENSLBEG00000013811	SRL	95	70.022	Labrus_bergylta
ENSIPUG00000011609	SRL	95	69.037	ENSLACG00000002825	SRL	96	69.037	Latimeria_chalumnae
ENSIPUG00000011609	SRL	95	70.183	ENSLOCG00000002644	srl	93	70.183	Lepisosteus_oculatus
ENSIPUG00000011609	SRL	89	71.744	ENSLAFG00000006329	SRL	50	69.954	Loxodonta_africana
ENSIPUG00000011609	SRL	91	69.690	ENSMFAG00000037383	SRL	97	70.883	Macaca_fascicularis
ENSIPUG00000011609	SRL	95	69.037	ENSMNEG00000019236	-	92	70.183	Macaca_nemestrina
ENSIPUG00000011609	SRL	95	65.349	ENSMLEG00000032156	SRL	91	66.512	Mandrillus_leucophaeus
ENSIPUG00000011609	SRL	99	71.335	ENSMAMG00000013756	SRL	53	71.554	Mastacembelus_armatus
ENSIPUG00000011609	SRL	95	69.954	ENSMAMG00000023322	srl	93	69.954	Mastacembelus_armatus
ENSIPUG00000011609	SRL	100	70.742	ENSMZEG00005004010	SRL	57	70.961	Maylandia_zebra
ENSIPUG00000011609	SRL	95	70.183	ENSMZEG00005004548	srl	96	70.183	Maylandia_zebra
ENSIPUG00000011609	SRL	92	70.449	ENSMGAG00000009342	SRL	92	73.425	Meleagris_gallopavo
ENSIPUG00000011609	SRL	95	68.349	ENSMICG00000032307	SRL	92	69.495	Microcebus_murinus
ENSIPUG00000011609	SRL	95	69.266	ENSMOCG00000008208	Srl	92	70.413	Microtus_ochrogaster
ENSIPUG00000011609	SRL	95	69.725	ENSMMOG00000013970	srl	97	69.725	Mola_mola
ENSIPUG00000011609	SRL	99	68.577	ENSMMOG00000021572	SRL	99	68.577	Mola_mola
ENSIPUG00000011609	SRL	95	71.954	ENSMALG00000000670	SRL	98	71.954	Monopterus_albus
ENSIPUG00000011609	SRL	95	69.037	ENSMALG00000005039	srl	96	69.037	Monopterus_albus
ENSIPUG00000011609	SRL	95	70.413	MGP_CAROLIEiJ_G0020400	Srl	92	70.413	Mus_caroli
ENSIPUG00000011609	SRL	95	70.413	ENSMUSG00000022519	Srl	92	70.413	Mus_musculus
ENSIPUG00000011609	SRL	95	70.413	MGP_SPRETEiJ_G0021294	Srl	92	70.413	Mus_spretus
ENSIPUG00000011609	SRL	89	71.990	ENSMPUG00000015025	SRL	53	70.183	Mustela_putorius_furo
ENSIPUG00000011609	SRL	89	72.482	ENSMLUG00000030733	SRL	55	70.642	Myotis_lucifugus
ENSIPUG00000011609	SRL	95	69.037	ENSNGAG00000019741	Srl	92	70.183	Nannospalax_galili
ENSIPUG00000011609	SRL	95	70.183	ENSNBRG00000023775	srl	93	70.183	Neolamprologus_brichardi
ENSIPUG00000011609	SRL	100	70.961	ENSNBRG00000002422	SRL	58	70.759	Neolamprologus_brichardi
ENSIPUG00000011609	SRL	95	64.450	ENSNLEG00000029051	SRL	92	65.596	Nomascus_leucogenys
ENSIPUG00000011609	SRL	89	67.322	ENSOPRG00000000477	-	51	65.826	Ochotona_princeps
ENSIPUG00000011609	SRL	95	68.807	ENSODEG00000013256	SRL	92	69.954	Octodon_degus
ENSIPUG00000011609	SRL	95	69.954	ENSONIG00000005192	srl	93	69.954	Oreochromis_niloticus
ENSIPUG00000011609	SRL	100	71.834	ENSORLG00000015064	SRL	97	71.397	Oryzias_latipes
ENSIPUG00000011609	SRL	95	69.495	ENSORLG00000008291	srl	91	70.649	Oryzias_latipes
ENSIPUG00000011609	SRL	100	71.179	ENSORLG00020018173	SRL	97	71.179	Oryzias_latipes_hni
ENSIPUG00000011609	SRL	95	69.495	ENSORLG00020019784	srl	79	70.649	Oryzias_latipes_hni
ENSIPUG00000011609	SRL	95	69.725	ENSORLG00015009342	srl	90	69.725	Oryzias_latipes_hsok
ENSIPUG00000011609	SRL	100	71.616	ENSORLG00015019063	SRL	97	71.616	Oryzias_latipes_hsok
ENSIPUG00000011609	SRL	95	69.954	ENSOMEG00000010006	srl	96	70.046	Oryzias_melastigma
ENSIPUG00000011609	SRL	100	72.052	ENSOMEG00000005682	SRL	53	72.271	Oryzias_melastigma
ENSIPUG00000011609	SRL	89	72.482	ENSOGAG00000029266	SRL	53	70.642	Otolemur_garnettii
ENSIPUG00000011609	SRL	89	71.990	ENSOARG00000003074	SRL	55	70.183	Ovis_aries
ENSIPUG00000011609	SRL	89	71.990	ENSPPAG00000024919	-	97	70.883	Pan_paniscus
ENSIPUG00000011609	SRL	95	69.037	ENSPPRG00000010274	SRL	97	70.644	Panthera_pardus
ENSIPUG00000011609	SRL	95	69.037	ENSPTIG00000015162	SRL	97	70.644	Panthera_tigris_altaica
ENSIPUG00000011609	SRL	95	69.037	ENSPTRG00000007712	SRL	97	70.883	Pan_troglodytes
ENSIPUG00000011609	SRL	95	69.037	ENSPANG00000013804	SRL	94	70.183	Papio_anubis
ENSIPUG00000011609	SRL	91	73.798	ENSPKIG00000024974	SRL	83	73.798	Paramormyrops_kingsleyae
ENSIPUG00000011609	SRL	95	70.183	ENSPKIG00000006405	srl	92	70.183	Paramormyrops_kingsleyae
ENSIPUG00000011609	SRL	100	68.996	ENSPMGG00000023505	-	99	68.996	Periophthalmus_magnuspinnatus
ENSIPUG00000011609	SRL	95	69.954	ENSPMGG00000021081	srl	94	69.954	Periophthalmus_magnuspinnatus
ENSIPUG00000011609	SRL	95	69.037	ENSPEMG00000015842	Srl	92	70.183	Peromyscus_maniculatus_bairdii
ENSIPUG00000011609	SRL	86	62.899	ENSPMAG00000004786	srl	93	62.899	Petromyzon_marinus
ENSIPUG00000011609	SRL	95	69.495	ENSPCIG00000012128	SRL	95	69.495	Phascolarctos_cinereus
ENSIPUG00000011609	SRL	95	69.196	ENSPFOG00000011408	srl	92	69.196	Poecilia_formosa
ENSIPUG00000011609	SRL	95	70.872	ENSPLAG00000008017	srl	95	70.872	Poecilia_latipinna
ENSIPUG00000011609	SRL	100	70.306	ENSPLAG00000002932	SRL	98	70.087	Poecilia_latipinna
ENSIPUG00000011609	SRL	100	69.869	ENSPMEG00000005890	SRL	59	70.524	Poecilia_mexicana
ENSIPUG00000011609	SRL	95	70.872	ENSPMEG00000006745	srl	95	70.872	Poecilia_mexicana
ENSIPUG00000011609	SRL	100	70.306	ENSPREG00000000315	SRL	98	70.306	Poecilia_reticulata
ENSIPUG00000011609	SRL	95	70.872	ENSPREG00000007751	srl	97	70.872	Poecilia_reticulata
ENSIPUG00000011609	SRL	90	70.218	ENSPPYG00000007053	SRL	96	71.429	Pongo_abelii
ENSIPUG00000011609	SRL	95	69.037	ENSPCOG00000023135	SRL	97	70.644	Propithecus_coquereli
ENSIPUG00000011609	SRL	89	71.744	ENSPVAG00000006586	SRL	54	69.954	Pteropus_vampyrus
ENSIPUG00000011609	SRL	100	70.742	ENSPNYG00000003423	SRL	57	70.961	Pundamilia_nyererei
ENSIPUG00000011609	SRL	95	70.183	ENSPNYG00000001200	srl	96	70.183	Pundamilia_nyererei
ENSIPUG00000011609	SRL	95	68.119	ENSPNAG00000023106	srl	93	68.119	Pygocentrus_nattereri
ENSIPUG00000011609	SRL	99	76.586	ENSPNAG00000007361	-	91	76.586	Pygocentrus_nattereri
ENSIPUG00000011609	SRL	95	68.807	ENSSBOG00000029273	SRL	92	69.954	Saimiri_boliviensis_boliviensis
ENSIPUG00000011609	SRL	95	69.495	ENSSFOG00015009773	srl	93	69.495	Scleropages_formosus
ENSIPUG00000011609	SRL	95	69.725	ENSSMAG00000016274	srl	95	69.725	Scophthalmus_maximus
ENSIPUG00000011609	SRL	99	72.867	ENSSMAG00000002232	SRL	50	73.085	Scophthalmus_maximus
ENSIPUG00000011609	SRL	100	69.677	ENSSDUG00000009161	SRL	98	69.677	Seriola_dumerili
ENSIPUG00000011609	SRL	95	69.954	ENSSDUG00000010808	srl	96	69.954	Seriola_dumerili
ENSIPUG00000011609	SRL	95	69.954	ENSSLDG00000022024	srl	94	69.954	Seriola_lalandi_dorsalis
ENSIPUG00000011609	SRL	100	72.489	ENSSLDG00000014601	SRL	99	72.489	Seriola_lalandi_dorsalis
ENSIPUG00000011609	SRL	90	72.115	ENSSPUG00000016859	SRL	92	72.115	Sphenodon_punctatus
ENSIPUG00000011609	SRL	95	70.183	ENSSPAG00000019105	srl	92	70.183	Stegastes_partitus
ENSIPUG00000011609	SRL	99	70.460	ENSSPAG00000014254	SRL	98	70.460	Stegastes_partitus
ENSIPUG00000011609	SRL	95	68.578	ENSSSCG00000007949	SRL	97	69.725	Sus_scrofa
ENSIPUG00000011609	SRL	92	70.686	ENSTGUG00000003951	-	93	70.686	Taeniopygia_guttata
ENSIPUG00000011609	SRL	78	72.829	ENSTGUG00000016121	-	99	72.829	Taeniopygia_guttata
ENSIPUG00000011609	SRL	95	69.725	ENSTRUG00000006005	srl	93	69.725	Takifugu_rubripes
ENSIPUG00000011609	SRL	97	69.369	ENSTRUG00000013310	SRL	56	69.369	Takifugu_rubripes
ENSIPUG00000011609	SRL	95	69.495	ENSTNIG00000009739	srl	93	69.495	Tetraodon_nigroviridis
ENSIPUG00000011609	SRL	89	71.990	ENSUAMG00000005701	SRL	54	70.183	Ursus_americanus
ENSIPUG00000011609	SRL	89	71.990	ENSUMAG00000002574	SRL	54	70.183	Ursus_maritimus
ENSIPUG00000011609	SRL	95	69.495	ENSXETG00000017313	srl	97	69.495	Xenopus_tropicalis
ENSIPUG00000011609	SRL	100	70.087	ENSXCOG00000014584	SRL	98	70.087	Xiphophorus_couchianus
ENSIPUG00000011609	SRL	90	72.115	ENSXCOG00000010424	srl	95	72.115	Xiphophorus_couchianus
ENSIPUG00000011609	SRL	95	71.101	ENSXMAG00000004625	srl	88	71.101	Xiphophorus_maculatus
ENSIPUG00000011609	SRL	100	70.961	ENSXMAG00000027598	SRL	62	71.179	Xiphophorus_maculatus