EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000011708 (Gene tree)
Gene ID
108270876
Gene Symbol
srsf7
Alias
sfrs7|srsf7|zgc:114203
Full Name
serine and arginine rich splicing factor 7
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
13521 bases
Position
chr10:4168114-4181634
Accession
108270876
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000017261RRM_1PF00076.222.8e-1611
ENSIPUP00000017250RRM_1PF00076.224.9e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000017994-850-ENSIPUP00000017261176 (aa)--
ENSIPUT00000017983-4178XM_017477839ENSIPUP00000017250236 (aa)XP_017333328A0A2D0RS46
Gene Model
Click here to download ENSIPUG00000011708's gene model file
Pathways
Pathway IDPathway NameSource
ipu03040SpliceosomeKEGG
ipu05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011708's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000011708srsf76331.304ENSIPUG00000017007zcrb18031.034
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000011708srsf76895.000ENSG00000115875SRSF79994.118Homo_sapiens
ENSIPUG00000011708srsf76474.336ENSACIG00000004885srsf7a7672.034Amphilophus_citrinellus
ENSIPUG00000011708srsf76892.500ENSACIG00000009890srsf7b9292.500Amphilophus_citrinellus
ENSIPUG00000011708srsf76867.213ENSAOCG00000021499srsf7b7966.964Amphiprion_ocellaris
ENSIPUG00000011708srsf76867.213ENSAPEG00000018802srsf7b7966.964Amphiprion_percula
ENSIPUG00000011708srsf76393.694ENSAPLG00000012167-5192.857Anas_platyrhynchos
ENSIPUG00000011708srsf77396.124ENSACAG00000006082SRSF75596.124Anolis_carolinensis
ENSIPUG00000011708srsf75269.149ENSANAG00000002046-5769.149Aotus_nancymaae
ENSIPUG00000011708srsf76895.000ENSANAG00000019399SRSF79994.118Aotus_nancymaae
ENSIPUG00000011708srsf75648.872ENSACLG00000010873-5276.190Astatotilapia_calliptera
ENSIPUG00000011708srsf710077.542ENSAMXG00000007005srsf7b6788.732Astyanax_mexicanus
ENSIPUG00000011708srsf76895.000ENSBTAG00000014891SRSF79994.118Bos_taurus
ENSIPUG00000011708srsf76895.000ENSCJAG00000015185SRSF79994.118Callithrix_jacchus
ENSIPUG00000011708srsf76895.000ENSCAFG00000029620SRSF75095.000Canis_familiaris
ENSIPUG00000011708srsf77461.832ENSCAFG00020013547-7562.810Canis_lupus_dingo
ENSIPUG00000011708srsf76895.000ENSCAFG00020022807SRSF79994.118Canis_lupus_dingo
ENSIPUG00000011708srsf76895.000ENSCHIG00000019180SRSF79994.118Capra_hircus
ENSIPUG00000011708srsf75158.696ENSCHIG00000019854-8360.000Capra_hircus
ENSIPUG00000011708srsf76895.000ENSTSYG00000012273SRSF79994.118Carlito_syrichta
ENSIPUG00000011708srsf76895.000ENSCPOG00000033318SRSF79994.118Cavia_porcellus
ENSIPUG00000011708srsf75258.511ENSCCAG00000025870-5958.511Cebus_capucinus
ENSIPUG00000011708srsf76895.000ENSCATG00000031728SRSF79994.118Cercocebus_atys
ENSIPUG00000011708srsf76895.000ENSCLAG00000005235SRSF79994.118Chinchilla_lanigera
ENSIPUG00000011708srsf76895.000ENSCSAG00000012296SRSF75095.000Chlorocebus_sabaeus
ENSIPUG00000011708srsf76893.333ENSCPBG00000018252-9992.647Chrysemys_picta_bellii
ENSIPUG00000011708srsf77396.124ENSCPBG00000018247-9994.853Chrysemys_picta_bellii
ENSIPUG00000011708srsf76542.857ENSCING00000011663-9152.817Ciona_intestinalis
ENSIPUG00000011708srsf78548.598ENSCING00000023459-5456.452Ciona_intestinalis
ENSIPUG00000011708srsf76857.258ENSCSAVG00000007369-6956.198Ciona_savignyi
ENSIPUG00000011708srsf76555.556ENSCSAVG00000010868-5558.197Ciona_savignyi
ENSIPUG00000011708srsf76895.000ENSCANG00000040757SRSF79994.118Colobus_angolensis_palliatus
ENSIPUG00000011708srsf76895.000ENSCGRG00001018245Srsf75095.000Cricetulus_griseus_chok1gshd
ENSIPUG00000011708srsf76594.783ENSCGRG00000005929Srsf79792.424Cricetulus_griseus_crigri
ENSIPUG00000011708srsf77271.654ENSCSEG00000006378srsf7a7874.775Cynoglossus_semilaevis
ENSIPUG00000011708srsf75467.010ENSCSEG00000002271srsf3b7367.010Cynoglossus_semilaevis
ENSIPUG00000011708srsf76988.525ENSCVAG00000006768srsf7b9967.460Cyprinodon_variegatus
ENSIPUG00000011708srsf77968.557ENSDARG00000035325srsf7a9673.333Danio_rerio
ENSIPUG00000011708srsf79484.242ENSDARG00000101057srsf7b9384.242Danio_rerio
ENSIPUG00000011708srsf76895.000ENSDNOG00000007821SRSF79994.118Dasypus_novemcinctus
ENSIPUG00000011708srsf76895.000ENSDORG00000008616Srsf75095.000Dipodomys_ordii
ENSIPUG00000011708srsf76552.344FBgn0028554x165749.669Drosophila_melanogaster
ENSIPUG00000011708srsf76873.950ENSEBUG00000004912srsf7a5173.950Eptatretus_burgeri
ENSIPUG00000011708srsf76948.538ENSEBUG00000002677-6260.417Eptatretus_burgeri
ENSIPUG00000011708srsf76895.000ENSEASG00005005547SRSF79994.118Equus_asinus_asinus
ENSIPUG00000011708srsf76895.000ENSECAG00000008664SRSF75095.000Equus_caballus
ENSIPUG00000011708srsf76895.000ENSEEUG00000014487SRSF75095.000Erinaceus_europaeus
ENSIPUG00000011708srsf75170.968ENSELUG00000002390srsf3a5369.565Esox_lucius
ENSIPUG00000011708srsf79679.204ENSELUG00000018155srsf7b8686.667Esox_lucius
ENSIPUG00000011708srsf77273.846ENSELUG00000016922srsf7a7779.630Esox_lucius
ENSIPUG00000011708srsf77052.239ENSELUG00000014357SRSF35269.412Esox_lucius
ENSIPUG00000011708srsf76659.322ENSFCAG00000028644-7959.322Felis_catus
ENSIPUG00000011708srsf76895.000ENSFCAG00000031143SRSF75595.000Felis_catus
ENSIPUG00000011708srsf76895.000ENSFDAG00000016030-9994.118Fukomys_damarensis
ENSIPUG00000011708srsf76882.353ENSFDAG00000017258-5282.500Fukomys_damarensis
ENSIPUG00000011708srsf79359.091ENSFHEG00000007159srsf7a6571.901Fundulus_heteroclitus
ENSIPUG00000011708srsf76988.525ENSFHEG00000023046srsf7b5388.333Fundulus_heteroclitus
ENSIPUG00000011708srsf76548.521ENSFHEG00000014610-7571.579Fundulus_heteroclitus
ENSIPUG00000011708srsf75269.474ENSGMOG00000008043SRSF36869.072Gadus_morhua
ENSIPUG00000011708srsf76573.043ENSGMOG00000002004srsf7a5071.429Gadus_morhua
ENSIPUG00000011708srsf76891.667ENSGALG00000033120SRSF79991.176Gallus_gallus
ENSIPUG00000011708srsf76886.777ENSGAFG00000008856srsf7b7989.091Gambusia_affinis
ENSIPUG00000011708srsf75563.542ENSGACG00000001473-8463.107Gasterosteus_aculeatus
ENSIPUG00000011708srsf76890.000ENSGAGG00000016294-9989.706Gopherus_agassizii
ENSIPUG00000011708srsf76893.333ENSGAGG00000003553SRSF79992.647Gopherus_agassizii
ENSIPUG00000011708srsf76895.000ENSGGOG00000014620SRSF79994.118Gorilla_gorilla
ENSIPUG00000011708srsf76871.200ENSHGLG00000005295-8871.200Heterocephalus_glaber_female
ENSIPUG00000011708srsf76895.000ENSHGLG00000013954-5095.000Heterocephalus_glaber_female
ENSIPUG00000011708srsf76895.000ENSHGLG00100006124-9994.118Heterocephalus_glaber_male
ENSIPUG00000011708srsf76871.200ENSHGLG00100014570-8871.200Heterocephalus_glaber_male
ENSIPUG00000011708srsf76895.000ENSSTOG00000004389SRSF79994.118Ictidomys_tridecemlineatus
ENSIPUG00000011708srsf77168.504ENSJJAG00000020230-7268.595Jaculus_jaculus
ENSIPUG00000011708srsf76895.000ENSJJAG00000023079Srsf75095.000Jaculus_jaculus
ENSIPUG00000011708srsf76894.118ENSLACG00000004052SRSF75094.118Latimeria_chalumnae
ENSIPUG00000011708srsf76381.818ENSLACG00000018688srsf7a5578.947Latimeria_chalumnae
ENSIPUG00000011708srsf76376.577ENSLOCG00000014314-6474.576Lepisosteus_oculatus
ENSIPUG00000011708srsf77396.124ENSLOCG00000015778srsf7b5496.124Lepisosteus_oculatus
ENSIPUG00000011708srsf75265.957ENSLAFG00000026731-5867.368Loxodonta_africana
ENSIPUG00000011708srsf76895.000ENSLAFG00000005666SRSF77595.000Loxodonta_africana
ENSIPUG00000011708srsf76895.000ENSMFAG00000001980SRSF79994.118Macaca_fascicularis
ENSIPUG00000011708srsf76894.958ENSMMUG00000011025SRSF77194.444Macaca_mulatta
ENSIPUG00000011708srsf76894.958ENSMNEG00000036669SRSF77194.444Macaca_nemestrina
ENSIPUG00000011708srsf76895.000ENSMLEG00000038852SRSF79994.118Mandrillus_leucophaeus
ENSIPUG00000011708srsf76894.167ENSMAMG00000017138srsf7b5394.167Mastacembelus_armatus
ENSIPUG00000011708srsf76395.495ENSMGAG00000007415SRSF75195.495Meleagris_gallopavo
ENSIPUG00000011708srsf76895.000ENSMAUG00000017430Srsf75095.000Mesocricetus_auratus
ENSIPUG00000011708srsf76678.448ENSMAUG00000021932-6076.667Mesocricetus_auratus
ENSIPUG00000011708srsf77047.024ENSMAUG00000011430-6254.255Mesocricetus_auratus
ENSIPUG00000011708srsf76894.958ENSMICG00000005046SRSF77194.444Microcebus_murinus
ENSIPUG00000011708srsf77288.189ENSMOCG00000022763-5190.833Microtus_ochrogaster
ENSIPUG00000011708srsf76474.336ENSMMOG00000005208srsf7a8070.732Mola_mola
ENSIPUG00000011708srsf77396.124ENSMODG00000008669-5596.124Monodelphis_domestica
ENSIPUG00000011708srsf76891.597ENSMODG00000023693-5191.667Monodelphis_domestica
ENSIPUG00000011708srsf76895.000MGP_CAROLIEiJ_G0021902Srsf75095.000Mus_caroli
ENSIPUG00000011708srsf76895.000ENSMUSG00000024097Srsf79994.118Mus_musculus
ENSIPUG00000011708srsf76894.167MGP_PahariEiJ_G0020891Srsf75094.167Mus_pahari
ENSIPUG00000011708srsf75465.263MGP_SPRETEiJ_G0020726-6065.263Mus_spretus
ENSIPUG00000011708srsf76895.000MGP_SPRETEiJ_G0022817Srsf75095.000Mus_spretus
ENSIPUG00000011708srsf76887.500ENSMLUG00000015692-5487.500Myotis_lucifugus
ENSIPUG00000011708srsf76895.000ENSMLUG00000009536SRSF75095.000Myotis_lucifugus
ENSIPUG00000011708srsf75470.526ENSMLUG00000010671-5672.043Myotis_lucifugus
ENSIPUG00000011708srsf76895.000ENSNGAG00000014431Srsf75095.000Nannospalax_galili
ENSIPUG00000011708srsf76573.043ENSNBRG00000006601srsf7a7671.186Neolamprologus_brichardi
ENSIPUG00000011708srsf76895.000ENSNLEG00000016349SRSF79994.118Nomascus_leucogenys
ENSIPUG00000011708srsf75463.918ENSNLEG00000030606-6063.918Nomascus_leucogenys
ENSIPUG00000011708srsf77396.124ENSMEUG00000016459-5496.124Notamacropus_eugenii
ENSIPUG00000011708srsf76292.661ENSMEUG00000000773-5792.727Notamacropus_eugenii
ENSIPUG00000011708srsf76895.000ENSOPRG00000010234SRSF75295.000Ochotona_princeps
ENSIPUG00000011708srsf76476.106ENSODEG00000008570-6075.862Octodon_degus
ENSIPUG00000011708srsf76895.000ENSODEG00000010029-5095.000Octodon_degus
ENSIPUG00000011708srsf76895.000ENSOCUG00000004087SRSF75095.000Oryctolagus_cuniculus
ENSIPUG00000011708srsf75470.526ENSORLG00020011157-7372.632Oryzias_latipes_hni
ENSIPUG00000011708srsf77547.191ENSORLG00015004309srsf3b5768.421Oryzias_latipes_hsok
ENSIPUG00000011708srsf75467.010ENSOMEG00000014893srsf3b6467.010Oryzias_melastigma
ENSIPUG00000011708srsf76895.000ENSOGAG00000010169SRSF75095.000Otolemur_garnettii
ENSIPUG00000011708srsf77394.531ENSOARG00000008771SRSF75095.000Ovis_aries
ENSIPUG00000011708srsf75245.528ENSOARG00000017340-8939.189Ovis_aries
ENSIPUG00000011708srsf76894.958ENSPPAG00000017907SRSF77194.444Pan_paniscus
ENSIPUG00000011708srsf76895.000ENSPPRG00000003682SRSF75595.000Panthera_pardus
ENSIPUG00000011708srsf76895.000ENSPTIG00000006350SRSF75595.000Panthera_tigris_altaica
ENSIPUG00000011708srsf76894.958ENSPTRG00000011851SRSF77194.444Pan_troglodytes
ENSIPUG00000011708srsf76894.958ENSPANG00000018079SRSF77194.444Papio_anubis
ENSIPUG00000011708srsf77791.176ENSPKIG00000022669SRSF78193.333Paramormyrops_kingsleyae
ENSIPUG00000011708srsf79287.654ENSPKIG00000017425srsf7b9287.654Paramormyrops_kingsleyae
ENSIPUG00000011708srsf76995.868ENSPSIG00000004636-5395.868Pelodiscus_sinensis
ENSIPUG00000011708srsf76970.732ENSPMGG00000021890srsf7a8572.034Periophthalmus_magnuspinnatus
ENSIPUG00000011708srsf75468.041ENSPMGG00000004040srsf3b7868.041Periophthalmus_magnuspinnatus
ENSIPUG00000011708srsf76895.000ENSPEMG00000015449Srsf75095.000Peromyscus_maniculatus_bairdii
ENSIPUG00000011708srsf76473.451ENSPMAG00000004472srsf7a5474.528Petromyzon_marinus
ENSIPUG00000011708srsf77396.124ENSPCIG00000020694-9994.853Phascolarctos_cinereus
ENSIPUG00000011708srsf76891.667ENSPCIG00000020726-8891.667Phascolarctos_cinereus
ENSIPUG00000011708srsf76988.525ENSPFOG00000008820srsf7b5288.333Poecilia_formosa
ENSIPUG00000011708srsf76988.525ENSPLAG00000023806srsf7b5288.333Poecilia_latipinna
ENSIPUG00000011708srsf76775.424ENSPREG00000020685srsf7a8675.676Poecilia_reticulata
ENSIPUG00000011708srsf76988.525ENSPREG00000006149srsf7b5588.333Poecilia_reticulata
ENSIPUG00000011708srsf76894.958ENSPPYG00000012480SRSF75095.000Pongo_abelii
ENSIPUG00000011708srsf76895.000ENSPCAG00000011348SRSF75295.000Procavia_capensis
ENSIPUG00000011708srsf76893.277ENSPCOG00000019422-5693.333Propithecus_coquereli
ENSIPUG00000011708srsf76982.787ENSPCOG00000023721-7682.500Propithecus_coquereli
ENSIPUG00000011708srsf76894.958ENSPVAG00000012076SRSF75294.958Pteropus_vampyrus
ENSIPUG00000011708srsf78091.489ENSPNAG00000012546srsf7b5991.489Pygocentrus_nattereri
ENSIPUG00000011708srsf76981.967ENSRNOG00000008398AABR07055789.17282.500Rattus_norvegicus
ENSIPUG00000011708srsf76895.000ENSRNOG00000027360Srsf75095.000Rattus_norvegicus
ENSIPUG00000011708srsf76295.413ENSRBIG00000024695SRSF77194.444Rhinopithecus_bieti
ENSIPUG00000011708srsf76895.000ENSRROG00000005080SRSF79994.118Rhinopithecus_roxellana
ENSIPUG00000011708srsf76895.000ENSSBOG00000025074SRSF79994.118Saimiri_boliviensis_boliviensis
ENSIPUG00000011708srsf76891.597ENSSHAG00000004597-5191.667Sarcophilus_harrisii
ENSIPUG00000011708srsf76396.396ENSSHAG00000015970-9195.276Sarcophilus_harrisii
ENSIPUG00000011708srsf75269.474ENSSFOG00015022844-5769.474Scleropages_formosus
ENSIPUG00000011708srsf76895.000ENSSFOG00015007348SRSF75195.000Scleropages_formosus
ENSIPUG00000011708srsf77396.124ENSSFOG00015021911srsf7b5196.124Scleropages_formosus
ENSIPUG00000011708srsf79675.000ENSSDUG00000021338srsf7b9880.556Seriola_dumerili
ENSIPUG00000011708srsf76993.443ENSSLDG00000021463srsf7b6893.333Seriola_lalandi_dorsalis
ENSIPUG00000011708srsf77987.857ENSSPAG00000017204srsf7b8593.333Stegastes_partitus
ENSIPUG00000011708srsf76874.380ENSSPAG00000022192srsf7a8774.775Stegastes_partitus
ENSIPUG00000011708srsf76895.000ENSSSCG00000008484SRSF79994.118Sus_scrofa
ENSIPUG00000011708srsf76892.500ENSTGUG00000002080-5092.500Taeniopygia_guttata
ENSIPUG00000011708srsf75463.918ENSTRUG00000024882srsf3b6163.918Takifugu_rubripes
ENSIPUG00000011708srsf76374.775ENSTRUG00000010529srsf7a5170.732Takifugu_rubripes
ENSIPUG00000011708srsf76053.901ENSTRUG00000023965-7571.579Takifugu_rubripes
ENSIPUG00000011708srsf76573.913ENSTNIG00000014279srsf7a5071.311Tetraodon_nigroviridis
ENSIPUG00000011708srsf75464.948ENSTNIG00000014643srsf3b5866.316Tetraodon_nigroviridis
ENSIPUG00000011708srsf76390.000ENSTTRG00000014324SRSF75090.000Tursiops_truncatus
ENSIPUG00000011708srsf76895.000ENSUAMG00000025051-9994.118Ursus_americanus
ENSIPUG00000011708srsf75260.440ENSUAMG00000011426-6177.966Ursus_americanus
ENSIPUG00000011708srsf76168.519ENSUMAG00000023107-6177.966Ursus_maritimus
ENSIPUG00000011708srsf76895.000ENSUMAG00000013534SRSF75095.000Ursus_maritimus
ENSIPUG00000011708srsf76895.000ENSVVUG00000018767-9994.118Vulpes_vulpes
ENSIPUG00000011708srsf76658.824ENSVVUG00000006092-6969.444Vulpes_vulpes
ENSIPUG00000011708srsf76891.667ENSXETG00000025300srsf75192.437Xenopus_tropicalis
ENSIPUG00000011708srsf77188.000ENSXCOG00000010843srsf7b8288.333Xiphophorus_couchianus
ENSIPUG00000011708srsf76874.167ENSXCOG00000009381srsf7a8674.775Xiphophorus_couchianus

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