EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000011915 (Gene tree)
Gene ID: 108268989
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 25775 bases
Position: chr8:20814390-20840164
Accession: 108268989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000017660	Not1	PF04054.15	2.1e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000018410	-	6993	XM_017474441	ENSIPUP00000017660	2330 (aa)	XP_017329930	-

Gene Model

Click here to download ENSIPUG00000011915's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011915	cnot1	100	89.491	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSIPUG00000011915	cnot1	100	90.092	ENSAPOG00000005042	cnot1	100	90.092	Acanthochromis_polyacanthus
ENSIPUG00000011915	cnot1	100	89.575	ENSAMEG00000017298	CNOT1	100	89.113	Ailuropoda_melanoleuca
ENSIPUG00000011915	cnot1	90	91.841	ENSACIG00000016003	cnot1	100	91.841	Amphilophus_citrinellus
ENSIPUG00000011915	cnot1	100	94.786	ENSAPEG00000022342	cnot1	100	94.786	Amphiprion_percula
ENSIPUG00000011915	cnot1	100	90.474	ENSATEG00000012892	cnot1	100	90.516	Anabas_testudineus
ENSIPUG00000011915	cnot1	100	88.810	ENSAPLG00000007162	CNOT1	100	88.349	Anas_platyrhynchos
ENSIPUG00000011915	cnot1	91	87.523	ENSACAG00000001602	CNOT1	98	87.517	Anolis_carolinensis
ENSIPUG00000011915	cnot1	100	86.597	ENSANAG00000038198	CNOT1	100	86.221	Aotus_nancymaae
ENSIPUG00000011915	cnot1	100	90.478	ENSACLG00000014234	cnot1	100	90.478	Astatotilapia_calliptera
ENSIPUG00000011915	cnot1	100	95.326	ENSAMXG00000013170	cnot1	100	95.326	Astyanax_mexicanus
ENSIPUG00000011915	cnot1	100	89.388	ENSBTAG00000020782	CNOT1	100	93.898	Bos_taurus
ENSIPUG00000011915	cnot1	79	41.754	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSIPUG00000011915	cnot1	100	89.220	ENSCJAG00000011318	CNOT1	100	90.664	Callithrix_jacchus
ENSIPUG00000011915	cnot1	100	88.698	ENSCAFG00000008426	CNOT1	100	88.614	Canis_familiaris
ENSIPUG00000011915	cnot1	100	90.201	ENSCAFG00020010156	CNOT1	100	90.784	Canis_lupus_dingo
ENSIPUG00000011915	cnot1	100	89.388	ENSCHIG00000010452	CNOT1	100	88.926	Capra_hircus
ENSIPUG00000011915	cnot1	100	89.346	ENSTSYG00000006888	CNOT1	100	88.968	Carlito_syrichta
ENSIPUG00000011915	cnot1	100	85.487	ENSCPOG00000013026	CNOT1	100	85.151	Cavia_porcellus
ENSIPUG00000011915	cnot1	100	87.710	ENSCCAG00000026333	CNOT1	100	87.332	Cebus_capucinus
ENSIPUG00000011915	cnot1	100	89.304	ENSCATG00000032625	CNOT1	100	88.926	Cercocebus_atys
ENSIPUG00000011915	cnot1	100	89.346	ENSCLAG00000006289	CNOT1	100	88.884	Chinchilla_lanigera
ENSIPUG00000011915	cnot1	100	89.304	ENSCSAG00000004731	CNOT1	100	88.926	Chlorocebus_sabaeus
ENSIPUG00000011915	cnot1	80	97.173	ENSCHOG00000009712	CNOT1	82	97.173	Choloepus_hoffmanni
ENSIPUG00000011915	cnot1	98	89.117	ENSCPBG00000026222	CNOT1	98	93.359	Chrysemys_picta_bellii
ENSIPUG00000011915	cnot1	100	58.046	ENSCING00000009149	-	100	57.984	Ciona_intestinalis
ENSIPUG00000011915	cnot1	89	62.084	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSIPUG00000011915	cnot1	100	87.589	ENSCANG00000040534	CNOT1	100	87.214	Colobus_angolensis_palliatus
ENSIPUG00000011915	cnot1	100	89.220	ENSCGRG00001016365	Cnot1	100	88.758	Cricetulus_griseus_chok1gshd
ENSIPUG00000011915	cnot1	100	89.220	ENSCGRG00000001714	Cnot1	100	88.758	Cricetulus_griseus_crigri
ENSIPUG00000011915	cnot1	100	88.898	ENSCVAG00000018930	cnot1	100	88.898	Cyprinodon_variegatus
ENSIPUG00000011915	cnot1	100	92.659	ENSDARG00000004174	cnot1	100	92.659	Danio_rerio
ENSIPUG00000011915	cnot1	100	87.254	ENSDNOG00000013250	CNOT1	100	86.751	Dasypus_novemcinctus
ENSIPUG00000011915	cnot1	99	46.023	FBgn0085436	Not1	99	47.880	Drosophila_melanogaster
ENSIPUG00000011915	cnot1	84	92.548	ENSETEG00000012806	CNOT1	84	92.548	Echinops_telfairi
ENSIPUG00000011915	cnot1	81	74.374	ENSEBUG00000011534	cnot1	95	74.374	Eptatretus_burgeri
ENSIPUG00000011915	cnot1	97	92.222	ENSEASG00005005819	CNOT1	100	94.643	Equus_asinus_asinus
ENSIPUG00000011915	cnot1	100	89.346	ENSECAG00000009889	CNOT1	100	88.884	Equus_caballus
ENSIPUG00000011915	cnot1	89	87.762	ENSEEUG00000006015	CNOT1	90	87.762	Erinaceus_europaeus
ENSIPUG00000011915	cnot1	100	93.785	ENSELUG00000014085	cnot1	100	93.785	Esox_lucius
ENSIPUG00000011915	cnot1	100	89.126	ENSFCAG00000025155	CNOT1	100	88.666	Felis_catus
ENSIPUG00000011915	cnot1	100	88.884	ENSFALG00000007285	CNOT1	100	88.423	Ficedula_albicollis
ENSIPUG00000011915	cnot1	100	89.304	ENSFDAG00000013399	CNOT1	100	88.842	Fukomys_damarensis
ENSIPUG00000011915	cnot1	100	91.279	ENSFHEG00000020574	cnot1	100	91.488	Fundulus_heteroclitus
ENSIPUG00000011915	cnot1	90	91.254	ENSGMOG00000012864	cnot1	100	91.532	Gadus_morhua
ENSIPUG00000011915	cnot1	100	88.926	ENSGALG00000002301	CNOT1	100	88.465	Gallus_gallus
ENSIPUG00000011915	cnot1	100	93.504	ENSGAFG00000015005	cnot1	100	93.504	Gambusia_affinis
ENSIPUG00000011915	cnot1	90	91.813	ENSGACG00000002606	cnot1	100	96.029	Gasterosteus_aculeatus
ENSIPUG00000011915	cnot1	100	89.388	ENSGAGG00000022646	CNOT1	100	90.623	Gopherus_agassizii
ENSIPUG00000011915	cnot1	100	89.346	ENSGGOG00000009547	CNOT1	100	88.968	Gorilla_gorilla
ENSIPUG00000011915	cnot1	100	90.562	ENSHBUG00000001729	cnot1	100	90.562	Haplochromis_burtoni
ENSIPUG00000011915	cnot1	100	89.220	ENSHGLG00000014322	CNOT1	100	88.800	Heterocephalus_glaber_female
ENSIPUG00000011915	cnot1	100	91.464	ENSHCOG00000006501	cnot1	100	91.464	Hippocampus_comes
ENSIPUG00000011915	cnot1	100	89.215	ENSSTOG00000005490	CNOT1	100	89.173	Ictidomys_tridecemlineatus
ENSIPUG00000011915	cnot1	100	88.716	ENSJJAG00000000633	Cnot1	100	88.255	Jaculus_jaculus
ENSIPUG00000011915	cnot1	100	91.921	ENSKMAG00000006149	cnot1	100	91.921	Kryptolebias_marmoratus
ENSIPUG00000011915	cnot1	95	96.063	ENSLBEG00000004740	cnot1	100	96.063	Labrus_bergylta
ENSIPUG00000011915	cnot1	100	90.915	ENSLACG00000010869	CNOT1	100	89.178	Latimeria_chalumnae
ENSIPUG00000011915	cnot1	100	92.414	ENSLOCG00000006324	cnot1	100	91.911	Lepisosteus_oculatus
ENSIPUG00000011915	cnot1	100	89.229	ENSLAFG00000000098	CNOT1	100	88.768	Loxodonta_africana
ENSIPUG00000011915	cnot1	100	89.491	ENSMFAG00000035888	CNOT1	100	89.113	Macaca_fascicularis
ENSIPUG00000011915	cnot1	100	89.262	ENSMMUG00000014625	CNOT1	94	98.182	Macaca_mulatta
ENSIPUG00000011915	cnot1	100	86.951	ENSMNEG00000031820	CNOT1	100	88.506	Macaca_nemestrina
ENSIPUG00000011915	cnot1	100	88.038	ENSMLEG00000040933	CNOT1	100	87.662	Mandrillus_leucophaeus
ENSIPUG00000011915	cnot1	100	93.376	ENSMAMG00000016524	cnot1	100	93.419	Mastacembelus_armatus
ENSIPUG00000011915	cnot1	100	87.778	ENSMZEG00005016210	cnot1	100	87.820	Maylandia_zebra
ENSIPUG00000011915	cnot1	100	89.113	ENSMGAG00000001908	CNOT1	100	88.651	Meleagris_gallopavo
ENSIPUG00000011915	cnot1	100	89.622	ENSMICG00000007071	CNOT1	100	89.160	Microcebus_murinus
ENSIPUG00000011915	cnot1	100	89.136	ENSMOCG00000017969	Cnot1	100	88.674	Microtus_ochrogaster
ENSIPUG00000011915	cnot1	100	89.127	ENSMMOG00000019134	cnot1	100	89.043	Mola_mola
ENSIPUG00000011915	cnot1	100	89.383	ENSMODG00000014199	CNOT1	100	88.922	Monodelphis_domestica
ENSIPUG00000011915	cnot1	100	94.741	ENSMALG00000008645	cnot1	100	94.741	Monopterus_albus
ENSIPUG00000011915	cnot1	95	97.143	MGP_CAROLIEiJ_G0031430	Cnot1	92	97.143	Mus_caroli
ENSIPUG00000011915	cnot1	100	89.281	ENSMUSG00000036550	Cnot1	100	88.819	Mus_musculus
ENSIPUG00000011915	cnot1	100	89.178	MGP_PahariEiJ_G0023028	Cnot1	100	88.716	Mus_pahari
ENSIPUG00000011915	cnot1	100	89.178	MGP_SPRETEiJ_G0032549	Cnot1	100	88.716	Mus_spretus
ENSIPUG00000011915	cnot1	100	89.388	ENSMPUG00000004830	CNOT1	100	88.926	Mustela_putorius_furo
ENSIPUG00000011915	cnot1	100	89.388	ENSMLUG00000003728	CNOT1	100	88.842	Myotis_lucifugus
ENSIPUG00000011915	cnot1	100	89.220	ENSNGAG00000018628	Cnot1	100	88.758	Nannospalax_galili
ENSIPUG00000011915	cnot1	97	85.045	ENSNBRG00000019358	cnot1	100	85.135	Neolamprologus_brichardi
ENSIPUG00000011915	cnot1	100	89.383	ENSNLEG00000003566	CNOT1	100	89.005	Nomascus_leucogenys
ENSIPUG00000011915	cnot1	87	92.361	ENSMEUG00000006145	CNOT1	86	92.361	Notamacropus_eugenii
ENSIPUG00000011915	cnot1	85	98.058	ENSOPRG00000005604	CNOT1	86	98.058	Ochotona_princeps
ENSIPUG00000011915	cnot1	100	89.262	ENSODEG00000016337	CNOT1	100	88.800	Octodon_degus
ENSIPUG00000011915	cnot1	100	92.366	ENSONIG00000007358	cnot1	100	92.366	Oreochromis_niloticus
ENSIPUG00000011915	cnot1	90	88.672	ENSOANG00000012109	CNOT1	100	88.577	Ornithorhynchus_anatinus
ENSIPUG00000011915	cnot1	100	89.346	ENSOCUG00000006911	CNOT1	100	88.884	Oryctolagus_cuniculus
ENSIPUG00000011915	cnot1	100	91.698	ENSORLG00000013734	cnot1	100	91.740	Oryzias_latipes
ENSIPUG00000011915	cnot1	100	89.962	ENSORLG00020017012	cnot1	100	90.004	Oryzias_latipes_hni
ENSIPUG00000011915	cnot1	100	89.878	ENSORLG00015007091	cnot1	100	89.920	Oryzias_latipes_hsok
ENSIPUG00000011915	cnot1	100	89.882	ENSOMEG00000015124	cnot1	100	89.882	Oryzias_melastigma
ENSIPUG00000011915	cnot1	100	89.388	ENSOGAG00000000543	CNOT1	100	88.926	Otolemur_garnettii
ENSIPUG00000011915	cnot1	100	89.388	ENSOARG00000001567	CNOT1	100	88.926	Ovis_aries
ENSIPUG00000011915	cnot1	100	89.304	ENSPPAG00000022013	CNOT1	100	88.926	Pan_paniscus
ENSIPUG00000011915	cnot1	100	89.388	ENSPPRG00000004867	CNOT1	100	88.926	Panthera_pardus
ENSIPUG00000011915	cnot1	100	89.388	ENSPTIG00000012589	CNOT1	100	88.926	Panthera_tigris_altaica
ENSIPUG00000011915	cnot1	100	89.042	ENSPTRG00000008183	CNOT1	100	88.666	Pan_troglodytes
ENSIPUG00000011915	cnot1	100	85.875	ENSPANG00000020901	CNOT1	100	85.875	Papio_anubis
ENSIPUG00000011915	cnot1	100	94.218	ENSPKIG00000023538	CNOT1	100	93.662	Paramormyrops_kingsleyae
ENSIPUG00000011915	cnot1	99	85.893	ENSPKIG00000002914	CNOT1	99	85.353	Paramormyrops_kingsleyae
ENSIPUG00000011915	cnot1	100	89.136	ENSPSIG00000005499	CNOT1	100	88.716	Pelodiscus_sinensis
ENSIPUG00000011915	cnot1	100	78.347	ENSPMAG00000009381	cnot1	100	78.482	Petromyzon_marinus
ENSIPUG00000011915	cnot1	100	91.100	ENSPCIG00000007343	CNOT1	100	94.841	Phascolarctos_cinereus
ENSIPUG00000011915	cnot1	99	91.213	ENSPFOG00000003497	cnot1	100	91.213	Poecilia_formosa
ENSIPUG00000011915	cnot1	95	95.866	ENSPLAG00000014018	cnot1	100	95.866	Poecilia_latipinna
ENSIPUG00000011915	cnot1	95	95.866	ENSPMEG00000005868	cnot1	100	95.866	Poecilia_mexicana
ENSIPUG00000011915	cnot1	95	95.866	ENSPREG00000018793	cnot1	100	95.866	Poecilia_reticulata
ENSIPUG00000011915	cnot1	100	89.346	ENSPPYG00000007410	CNOT1	100	88.968	Pongo_abelii
ENSIPUG00000011915	cnot1	89	85.536	ENSPCAG00000003241	CNOT1	90	85.258	Procavia_capensis
ENSIPUG00000011915	cnot1	100	89.317	ENSPCOG00000027139	CNOT1	100	88.856	Propithecus_coquereli
ENSIPUG00000011915	cnot1	100	86.367	ENSPVAG00000004243	CNOT1	100	86.577	Pteropus_vampyrus
ENSIPUG00000011915	cnot1	100	89.646	ENSPNYG00000012919	cnot1	100	89.689	Pundamilia_nyererei
ENSIPUG00000011915	cnot1	100	97.127	ENSPNAG00000000246	cnot1	100	97.127	Pygocentrus_nattereri
ENSIPUG00000011915	cnot1	100	89.136	ENSRNOG00000012271	Cnot1	100	88.674	Rattus_norvegicus
ENSIPUG00000011915	cnot1	100	87.118	ENSRBIG00000044598	CNOT1	100	86.742	Rhinopithecus_bieti
ENSIPUG00000011915	cnot1	100	89.304	ENSRROG00000000906	CNOT1	100	88.926	Rhinopithecus_roxellana
ENSIPUG00000011915	cnot1	100	85.148	ENSSBOG00000029155	CNOT1	100	84.773	Saimiri_boliviensis_boliviensis
ENSIPUG00000011915	cnot1	100	89.355	ENSSHAG00000012187	CNOT1	100	88.768	Sarcophilus_harrisii
ENSIPUG00000011915	cnot1	100	90.448	ENSSFOG00015017614	cnot1	100	89.862	Scleropages_formosus
ENSIPUG00000011915	cnot1	100	90.894	ENSSMAG00000013844	cnot1	100	91.101	Scophthalmus_maximus
ENSIPUG00000011915	cnot1	100	90.264	ENSSDUG00000021491	cnot1	100	90.306	Seriola_dumerili
ENSIPUG00000011915	cnot1	100	92.702	ENSSLDG00000014816	cnot1	100	92.702	Seriola_lalandi_dorsalis
ENSIPUG00000011915	cnot1	83	95.266	ENSSARG00000000762	CNOT1	88	95.266	Sorex_araneus
ENSIPUG00000011915	cnot1	100	94.831	ENSSPAG00000018802	cnot1	100	94.746	Stegastes_partitus
ENSIPUG00000011915	cnot1	100	90.878	ENSSSCG00000002799	CNOT1	100	93.898	Sus_scrofa
ENSIPUG00000011915	cnot1	100	88.898	ENSTGUG00000005919	CNOT1	100	88.437	Taeniopygia_guttata
ENSIPUG00000011915	cnot1	100	90.438	ENSTNIG00000018706	cnot1	100	90.438	Tetraodon_nigroviridis
ENSIPUG00000011915	cnot1	82	97.183	ENSTBEG00000000720	CNOT1	80	97.183	Tupaia_belangeri
ENSIPUG00000011915	cnot1	95	87.993	ENSTTRG00000008460	CNOT1	95	87.355	Tursiops_truncatus
ENSIPUG00000011915	cnot1	100	89.388	ENSUAMG00000009251	CNOT1	100	88.926	Ursus_americanus
ENSIPUG00000011915	cnot1	100	89.388	ENSUMAG00000021291	CNOT1	100	88.926	Ursus_maritimus
ENSIPUG00000011915	cnot1	97	89.774	ENSVPAG00000008846	CNOT1	97	89.774	Vicugna_pacos
ENSIPUG00000011915	cnot1	100	90.201	ENSVVUG00000024037	CNOT1	100	90.784	Vulpes_vulpes
ENSIPUG00000011915	cnot1	100	84.228	ENSXETG00000015900	cnot1	100	84.277	Xenopus_tropicalis
ENSIPUG00000011915	cnot1	100	93.462	ENSXCOG00000013552	cnot1	100	93.462	Xiphophorus_couchianus
ENSIPUG00000011915	cnot1	100	93.504	ENSXMAG00000006031	cnot1	100	93.504	Xiphophorus_maculatus