EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000011933 (Gene tree)
Gene ID
108279284
Gene Symbol
-
Alias
-
Full Name
zinc finger matrin-type protein 1-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
6355 bases
Position
chr18:5116304-5122658
Accession
108279284
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000017568zf-metPF12874.73.9e-2814
ENSIPUP00000017568zf-metPF12874.73.9e-2824
ENSIPUP00000017568zf-metPF12874.73.9e-2834
ENSIPUP00000017568zf-metPF12874.73.9e-2844
ENSIPUP00000017568zf-C2H2_jazPF12171.82.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000018314-2285XM_017493409ENSIPUP00000017568572 (aa)XP_017348898A0A2D0T1V9
Gene Model
Click here to download ENSIPUG00000011933's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011933's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000011933-6845.742ENSAOCG00000007093-9744.086Amphiprion_ocellaris
ENSIPUG00000011933-9740.722ENSATEG00000023589-9740.894Anabas_testudineus
ENSIPUG00000011933-9840.864ENSACLG00000012751-6644.146Astatotilapia_calliptera
ENSIPUG00000011933-8837.853ENSCVAG00000018034-9736.399Cyprinodon_variegatus
ENSIPUG00000011933-6248.549ENSELUG00000010589-9243.011Esox_lucius
ENSIPUG00000011933-6141.643ENSGMOG00000008972-7241.724Gadus_morhua
ENSIPUG00000011933-8039.721ENSGACG00000009018-9938.845Gasterosteus_aculeatus
ENSIPUG00000011933-5352.273ENSHBUG00000020963-5152.273Haplochromis_burtoni
ENSIPUG00000011933-8439.105ENSHCOG00000013075-9938.521Hippocampus_comes
ENSIPUG00000011933-9640.163ENSLBEG00000027221-9442.459Labrus_bergylta
ENSIPUG00000011933-9840.667ENSMZEG00005026847-6644.146Maylandia_zebra
ENSIPUG00000011933-5047.020ENSMALG00000002560-9741.569Monopterus_albus
ENSIPUG00000011933-10055.276ENSPNAG00000006731-10055.573Pygocentrus_nattereri
ENSIPUG00000011933-5743.027ENSSMAG00000009994-9839.811Scophthalmus_maximus
ENSIPUG00000011933-5453.231ENSSDUG00000022406-9941.997Seriola_dumerili
ENSIPUG00000011933-5042.345ENSSPAG00000018876-9837.137Stegastes_partitus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us