EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000011951 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12923 bases
Position: chr7:26124838-26137760
Accession: 108267320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000017644	zf-RanBP	PF00641.18	1.3e-07	1	1
ENSIPUP00000017615	zf-RanBP	PF00641.18	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000018394	-	1089	XM_017471344	ENSIPUP00000017644	363 (aa)	XP_017326833	-
ENSIPUT00000018364	-	1029	-	ENSIPUP00000017615	342 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000011951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000011951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000011951	sharpin	92	67.647	ENSIPUG00000014247	shrprbck1r	54	53.086

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000011951	sharpin	97	77.419	ENSAPOG00000022737	shrprbck1r	50	77.419	Acanthochromis_polyacanthus
ENSIPUG00000011951	sharpin	99	56.266	ENSAPOG00000023352	sharpin	87	57.289	Acanthochromis_polyacanthus
ENSIPUG00000011951	sharpin	94	88.462	ENSACIG00000002184	shrprbck1r	72	88.462	Amphilophus_citrinellus
ENSIPUG00000011951	sharpin	95	88.462	ENSAOCG00000002890	shrprbck1r	54	56.853	Amphiprion_ocellaris
ENSIPUG00000011951	sharpin	99	56.522	ENSAOCG00000017464	sharpin	87	57.545	Amphiprion_ocellaris
ENSIPUG00000011951	sharpin	99	56.522	ENSAPEG00000004049	sharpin	87	57.545	Amphiprion_percula
ENSIPUG00000011951	sharpin	95	88.462	ENSAPEG00000023274	shrprbck1r	54	57.990	Amphiprion_percula
ENSIPUG00000011951	sharpin	99	57.881	ENSATEG00000007832	sharpin	80	57.881	Anabas_testudineus
ENSIPUG00000011951	sharpin	96	75.000	ENSATEG00000014561	shrprbck1r	54	58.639	Anabas_testudineus
ENSIPUG00000011951	sharpin	83	41.748	ENSACLG00000020160	-	82	46.970	Astatotilapia_calliptera
ENSIPUG00000011951	sharpin	97	72.973	ENSACLG00000022609	shrprbck1r	51	72.973	Astatotilapia_calliptera
ENSIPUG00000011951	sharpin	97	76.923	ENSAMXG00000021016	shrprbck1r	53	76.923	Astyanax_mexicanus
ENSIPUG00000011951	sharpin	99	78.495	ENSAMXG00000006229	sharpin	96	78.495	Astyanax_mexicanus
ENSIPUG00000011951	sharpin	99	55.091	ENSCSEG00000011306	shrprbck1r	54	55.614	Cynoglossus_semilaevis
ENSIPUG00000011951	sharpin	99	54.242	ENSCVAG00000006586	sharpin	87	54.242	Cyprinodon_variegatus
ENSIPUG00000011951	sharpin	95	88.462	ENSCVAG00000007250	shrprbck1r	55	54.707	Cyprinodon_variegatus
ENSIPUG00000011951	sharpin	100	63.333	ENSDARG00000076995	sharpin	79	83.333	Danio_rerio
ENSIPUG00000011951	sharpin	94	73.077	ENSDARG00000059871	shrprbck1r	72	73.077	Danio_rerio
ENSIPUG00000011951	sharpin	99	57.436	ENSELUG00000016022	shrprbck1r	54	57.692	Esox_lucius
ENSIPUG00000011951	sharpin	99	54.872	ENSFHEG00000013564	sharpin	87	54.872	Fundulus_heteroclitus
ENSIPUG00000011951	sharpin	99	47.959	ENSGMOG00000010123	sharpin	94	47.368	Gadus_morhua
ENSIPUG00000011951	sharpin	99	45.283	ENSGAFG00000021405	sharpin	95	42.328	Gambusia_affinis
ENSIPUG00000011951	sharpin	99	54.427	ENSGAFG00000009309	shrprbck1r	54	54.427	Gambusia_affinis
ENSIPUG00000011951	sharpin	96	72.973	ENSHBUG00000021933	shrprbck1r	50	72.973	Haplochromis_burtoni
ENSIPUG00000011951	sharpin	99	54.155	ENSHCOG00000018847	sharpin	74	55.228	Hippocampus_comes
ENSIPUG00000011951	sharpin	95	80.000	ENSKMAG00000015204	sharpin	63	80.000	Kryptolebias_marmoratus
ENSIPUG00000011951	sharpin	95	88.462	ENSKMAG00000015215	shrprbck1r	54	54.660	Kryptolebias_marmoratus
ENSIPUG00000011951	sharpin	97	72.973	ENSLBEG00000016876	shrprbck1r	50	72.973	Labrus_bergylta
ENSIPUG00000011951	sharpin	98	60.976	ENSLBEG00000016624	sharpin	86	60.976	Labrus_bergylta
ENSIPUG00000011951	sharpin	87	92.593	ENSLACG00000010948	-	57	45.244	Latimeria_chalumnae
ENSIPUG00000011951	sharpin	98	65.116	ENSLOCG00000008910	shrprbck1r	53	65.116	Lepisosteus_oculatus
ENSIPUG00000011951	sharpin	95	77.419	ENSMAMG00000022930	shrprbck1r	54	55.754	Mastacembelus_armatus
ENSIPUG00000011951	sharpin	98	47.025	ENSMAMG00000014645	sharpin	93	46.459	Mastacembelus_armatus
ENSIPUG00000011951	sharpin	97	72.973	ENSMZEG00005021257	shrprbck1r	51	72.973	Maylandia_zebra
ENSIPUG00000011951	sharpin	80	54.425	ENSMMOG00000016788	sharpin	90	55.851	Mola_mola
ENSIPUG00000011951	sharpin	92	88.462	ENSMMOG00000003764	shrprbck1r	54	56.701	Mola_mola
ENSIPUG00000011951	sharpin	89	88.462	ENSMALG00000008861	shrprbck1r	54	56.853	Monopterus_albus
ENSIPUG00000011951	sharpin	98	45.152	ENSMALG00000020528	sharpin	94	45.152	Monopterus_albus
ENSIPUG00000011951	sharpin	83	50.662	ENSNBRG00000012382	sharpin	92	51.987	Neolamprologus_brichardi
ENSIPUG00000011951	sharpin	97	72.973	ENSNBRG00000002270	shrprbck1r	51	72.973	Neolamprologus_brichardi
ENSIPUG00000011951	sharpin	97	72.973	ENSONIG00000014401	shrprbck1r	51	72.973	Oreochromis_niloticus
ENSIPUG00000011951	sharpin	99	54.177	ENSONIG00000009626	-	99	54.783	Oreochromis_niloticus
ENSIPUG00000011951	sharpin	95	88.462	ENSORLG00000007392	shrprbck1r	54	53.944	Oryzias_latipes
ENSIPUG00000011951	sharpin	98	80.000	ENSORLG00000017281	sharpin	76	80.000	Oryzias_latipes
ENSIPUG00000011951	sharpin	99	56.331	ENSORLG00020000801	sharpin	87	57.364	Oryzias_latipes_hni
ENSIPUG00000011951	sharpin	95	88.462	ENSORLG00020018619	shrprbck1r	54	53.944	Oryzias_latipes_hni
ENSIPUG00000011951	sharpin	98	80.000	ENSORLG00015009860	sharpin	77	80.000	Oryzias_latipes_hsok
ENSIPUG00000011951	sharpin	95	88.462	ENSORLG00015018865	shrprbck1r	54	54.359	Oryzias_latipes_hsok
ENSIPUG00000011951	sharpin	99	45.879	ENSOMEG00000005729	sharpin	88	43.989	Oryzias_melastigma
ENSIPUG00000011951	sharpin	95	88.462	ENSOMEG00000012749	shrprbck1r	54	54.337	Oryzias_melastigma
ENSIPUG00000011951	sharpin	95	84.615	ENSPKIG00000018308	-	74	84.615	Paramormyrops_kingsleyae
ENSIPUG00000011951	sharpin	100	59.640	ENSPKIG00000006933	shrprbck1r	55	59.640	Paramormyrops_kingsleyae
ENSIPUG00000011951	sharpin	99	56.053	ENSPMGG00000013254	shrprbck1r	53	56.053	Periophthalmus_magnuspinnatus
ENSIPUG00000011951	sharpin	82	51.556	ENSPMGG00000019318	sharpin	95	53.804	Periophthalmus_magnuspinnatus
ENSIPUG00000011951	sharpin	99	55.013	ENSPFOG00000015253	sharpin	87	55.013	Poecilia_formosa
ENSIPUG00000011951	sharpin	99	55.270	ENSPFOG00000004214	shrprbck1r	81	55.270	Poecilia_formosa
ENSIPUG00000011951	sharpin	99	55.013	ENSPLAG00000000423	sharpin	87	55.013	Poecilia_latipinna
ENSIPUG00000011951	sharpin	99	54.756	ENSPLAG00000020523	shrprbck1r	54	54.756	Poecilia_latipinna
ENSIPUG00000011951	sharpin	99	46.006	ENSPMEG00000023030	sharpin	82	50.562	Poecilia_mexicana
ENSIPUG00000011951	sharpin	99	55.844	ENSPMEG00000006877	shrprbck1r	54	55.844	Poecilia_mexicana
ENSIPUG00000011951	sharpin	99	55.409	ENSPREG00000014689	shrprbck1r	53	55.409	Poecilia_reticulata
ENSIPUG00000011951	sharpin	99	54.359	ENSPREG00000009702	sharpin	87	54.359	Poecilia_reticulata
ENSIPUG00000011951	sharpin	97	72.973	ENSPNYG00000022601	shrprbck1r	51	72.973	Pundamilia_nyererei
ENSIPUG00000011951	sharpin	98	81.481	ENSPNAG00000007847	shrprbck1r	53	81.481	Pygocentrus_nattereri
ENSIPUG00000011951	sharpin	99	73.370	ENSPNAG00000002911	sharpin	98	73.641	Pygocentrus_nattereri
ENSIPUG00000011951	sharpin	94	64.192	ENSSFOG00015004028	sharpin	92	45.301	Scleropages_formosus
ENSIPUG00000011951	sharpin	99	56.962	ENSSMAG00000018085	shrprbck1r	54	56.962	Scophthalmus_maximus
ENSIPUG00000011951	sharpin	96	75.758	ENSSDUG00000002959	shrprbck1r	54	57.545	Seriola_dumerili
ENSIPUG00000011951	sharpin	99	47.594	ENSSDUG00000019039	sharpin	94	44.236	Seriola_dumerili
ENSIPUG00000011951	sharpin	94	88.462	ENSSLDG00000009026	shrprbck1r	54	56.122	Seriola_lalandi_dorsalis
ENSIPUG00000011951	sharpin	95	88.462	ENSSPAG00000016097	shrprbck1r	56	57.692	Stegastes_partitus
ENSIPUG00000011951	sharpin	77	50.566	ENSSPAG00000021807	sharpin	78	60.648	Stegastes_partitus
ENSIPUG00000011951	sharpin	98	73.529	ENSTRUG00000006949	shrprbck1r	50	73.529	Takifugu_rubripes
ENSIPUG00000011951	sharpin	99	53.191	ENSTRUG00000011046	sharpin	95	47.090	Takifugu_rubripes
ENSIPUG00000011951	sharpin	99	54.522	ENSTNIG00000008521	sharpin	94	54.522	Tetraodon_nigroviridis
ENSIPUG00000011951	sharpin	99	55.497	ENSXCOG00000006701	shrprbck1r	53	55.497	Xiphophorus_couchianus
ENSIPUG00000011951	sharpin	99	45.013	ENSXCOG00000015019	sharpin	96	43.562	Xiphophorus_couchianus
ENSIPUG00000011951	sharpin	99	55.270	ENSXMAG00000022076	sharpin	87	55.270	Xiphophorus_maculatus
ENSIPUG00000011951	sharpin	99	55.497	ENSXMAG00000018972	shrprbck1r	53	55.497	Xiphophorus_maculatus