EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000012010 (Gene tree)
Gene ID
108273414
Gene Symbol
rbfox3a
Alias
rbfox3
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
376162 bases
Position
chr13:11755507-12131668
Accession
108273414
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000017961Fox-1_CPF12414.83e-4411
ENSIPUP00000017885Fox-1_CPF12414.83.1e-4411
ENSIPUP00000017913Fox-1_CPF12414.83.2e-4411
ENSIPUP00000017853Fox-1_CPF12414.83.5e-4411
ENSIPUP00000017945Fox-1_CPF12414.84.1e-4411
ENSIPUP00000018025Fox-1_CPF12414.84.9e-1311
ENSIPUP00000017961RRM_1PF00076.221e-1811
ENSIPUP00000018025RRM_1PF00076.221.2e-1811
ENSIPUP00000017913RRM_1PF00076.221.8e-1811
ENSIPUP00000017945RRM_1PF00076.222.2e-1811
ENSIPUP00000017853RRM_1PF00076.222.2e-1811
ENSIPUP00000017885RRM_1PF00076.220.0002811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000018674-4776XM_017482613ENSIPUP00000017913331 (aa)XP_017338102-
ENSIPUT00000018727-4102XM_017482608ENSIPUP00000017961387 (aa)XP_017338097A0A2D0S5S9
ENSIPUT00000018646-5320-ENSIPUP00000017885342 (aa)--
ENSIPUT00000018710-5144XM_017482610ENSIPUP00000017945367 (aa)XP_017338099-
ENSIPUT00000018613-5413XM_017482611ENSIPUP00000017853373 (aa)XP_017338100A0A2D0S793
ENSIPUT00000018790-1074-ENSIPUP00000018025357 (aa)--
Gene Model
Click here to download ENSIPUG00000012010's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012010's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000012010rbfox3a6672.687ENSIPUG00000000065rbfox1l6970.204
ENSIPUG00000012010rbfox3a9573.270ENSIPUG00000015215rbfox19669.096
ENSIPUG00000012010rbfox3a9566.857ENSIPUG00000021966rbfox3b10077.007
ENSIPUG00000012010rbfox3a8655.627ENSIPUG00000016896rbfox28658.175
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000012010rbfox3a9081.518ENSG00000167281RBFOX39992.000Homo_sapiens
ENSIPUG00000012010rbfox3a10084.399ENSAPOG00000021630rbfox3b10082.609Acanthochromis_polyacanthus
ENSIPUG00000012010rbfox3a10070.811ENSAPOG00000015658-9170.109Acanthochromis_polyacanthus
ENSIPUG00000012010rbfox3a9874.438ENSAMEG00000014170RBFOX39871.282Ailuropoda_melanoleuca
ENSIPUG00000012010rbfox3a9580.503ENSACIG00000010817rbfox3b9578.033Amphilophus_citrinellus
ENSIPUG00000012010rbfox3a9471.515ENSACIG00000003768-7974.825Amphilophus_citrinellus
ENSIPUG00000012010rbfox3a10084.097ENSAOCG00000012358rbfox3b10082.210Amphiprion_ocellaris
ENSIPUG00000012010rbfox3a10081.402ENSAOCG00000010786-9781.402Amphiprion_ocellaris
ENSIPUG00000012010rbfox3a10075.472ENSAPEG00000019081rbfox3b9973.854Amphiprion_percula
ENSIPUG00000012010rbfox3a10074.510ENSAPEG00000015891-9371.504Amphiprion_percula
ENSIPUG00000012010rbfox3a9575.000ENSATEG00000019945rbfox3b9675.224Anabas_testudineus
ENSIPUG00000012010rbfox3a9079.208ENSATEG00000023101-9379.085Anabas_testudineus
ENSIPUG00000012010rbfox3a9880.060ENSACAG00000016093RBFOX310077.808Anolis_carolinensis
ENSIPUG00000012010rbfox3a9081.188ENSANAG00000023457RBFOX39578.878Aotus_nancymaae
ENSIPUG00000012010rbfox3a10082.210ENSACLG00000025552-10081.941Astatotilapia_calliptera
ENSIPUG00000012010rbfox3a10084.143ENSACLG00000020011rbfox3b10082.398Astatotilapia_calliptera
ENSIPUG00000012010rbfox3a10095.770ENSAMXG00000037246rbfox3a10095.770Astyanax_mexicanus
ENSIPUG00000012010rbfox3a9879.635ENSAMXG00000042841rbfox3b10076.323Astyanax_mexicanus
ENSIPUG00000012010rbfox3a7388.462ENSBTAG00000006280RBFOX39565.517Bos_taurus
ENSIPUG00000012010rbfox3a9071.617ENSCJAG00000009563RBFOX39668.000Callithrix_jacchus
ENSIPUG00000012010rbfox3a7390.496ENSCAFG00000005547RBFOX310080.212Canis_familiaris
ENSIPUG00000012010rbfox3a7388.889ENSCAFG00020008126RBFOX39669.505Canis_lupus_dingo
ENSIPUG00000012010rbfox3a7388.889ENSCHIG00000009124RBFOX39668.956Capra_hircus
ENSIPUG00000012010rbfox3a7388.462ENSTSYG00000029617RBFOX39671.143Carlito_syrichta
ENSIPUG00000012010rbfox3a7388.462ENSCPOG00000021703RBFOX39671.038Cavia_porcellus
ENSIPUG00000012010rbfox3a9081.188ENSCCAG00000028450RBFOX39578.878Cebus_capucinus
ENSIPUG00000012010rbfox3a9081.518ENSCATG00000018349RBFOX39579.208Cercocebus_atys
ENSIPUG00000012010rbfox3a7388.462ENSCLAG00000006449RBFOX39671.978Chinchilla_lanigera
ENSIPUG00000012010rbfox3a9081.518ENSCSAG00000002355RBFOX39579.208Chlorocebus_sabaeus
ENSIPUG00000012010rbfox3a10078.806ENSCPBG00000010904RBFOX310078.507Chrysemys_picta_bellii
ENSIPUG00000012010rbfox3a9081.518ENSCANG00000043120RBFOX39579.208Colobus_angolensis_palliatus
ENSIPUG00000012010rbfox3a9068.091ENSCGRG00001019476Rbfox39669.863Cricetulus_griseus_chok1gshd
ENSIPUG00000012010rbfox3a9068.091ENSCGRG00000003268Rbfox39669.863Cricetulus_griseus_crigri
ENSIPUG00000012010rbfox3a10080.593ENSCSEG00000015567RBFOX39881.551Cynoglossus_semilaevis
ENSIPUG00000012010rbfox3a10068.365ENSCSEG00000020606RBFOX310067.024Cynoglossus_semilaevis
ENSIPUG00000012010rbfox3a10083.820ENSCVAG00000006882rbfox3b10081.963Cyprinodon_variegatus
ENSIPUG00000012010rbfox3a9573.016ENSDARG00000074310rbfox3b9687.047Danio_rerio
ENSIPUG00000012010rbfox3a10094.638ENSDARG00000010083rbfox3a10094.638Danio_rerio
ENSIPUG00000012010rbfox3a8568.502ENSDNOG00000039391RBFOX36991.803Dasypus_novemcinctus
ENSIPUG00000012010rbfox3a7084.615ENSDORG00000005352Rbfox39661.157Dipodomys_ordii
ENSIPUG00000012010rbfox3a8457.045ENSEBUG00000013559RBFOX37159.615Eptatretus_burgeri
ENSIPUG00000012010rbfox3a9966.476ENSEBUG00000002129RBFOX39968.347Eptatretus_burgeri
ENSIPUG00000012010rbfox3a9079.934ENSEASG00005005059RBFOX39579.934Equus_asinus_asinus
ENSIPUG00000012010rbfox3a9079.934ENSECAG00000023811RBFOX39579.934Equus_caballus
ENSIPUG00000012010rbfox3a7983.099ENSEEUG00000013974RBFOX37292.000Erinaceus_europaeus
ENSIPUG00000012010rbfox3a10083.887ENSELUG00000017963rbfox3b10081.586Esox_lucius
ENSIPUG00000012010rbfox3a9877.219ENSFCAG00000002555RBFOX310079.178Felis_catus
ENSIPUG00000012010rbfox3a9866.482ENSFALG00000012288RBFOX39960.880Ficedula_albicollis
ENSIPUG00000012010rbfox3a7088.462ENSFDAG00000007489RBFOX39665.027Fukomys_damarensis
ENSIPUG00000012010rbfox3a9575.472ENSFHEG00000008550rbfox3b9581.181Fundulus_heteroclitus
ENSIPUG00000012010rbfox3a7589.655ENSGMOG00000019304-9174.671Gadus_morhua
ENSIPUG00000012010rbfox3a9881.155ENSGALG00000032889RBFOX310079.063Gallus_gallus
ENSIPUG00000012010rbfox3a10078.763ENSGAFG00000005025rbfox3b10076.658Gambusia_affinis
ENSIPUG00000012010rbfox3a9070.655ENSGACG00000002138-9672.329Gasterosteus_aculeatus
ENSIPUG00000012010rbfox3a10078.806ENSGAGG00000020025RBFOX39879.009Gopherus_agassizii
ENSIPUG00000012010rbfox3a9081.518ENSGGOG00000012546RBFOX39579.208Gorilla_gorilla
ENSIPUG00000012010rbfox3a9882.067ENSHBUG00000023098-9981.429Haplochromis_burtoni
ENSIPUG00000012010rbfox3a10084.143ENSHBUG00000018099rbfox3b10082.398Haplochromis_burtoni
ENSIPUG00000012010rbfox3a9069.209ENSHGLG00000008679RBFOX39669.565Heterocephalus_glaber_female
ENSIPUG00000012010rbfox3a7088.889ENSHGLG00100014739RBFOX39664.946Heterocephalus_glaber_male
ENSIPUG00000012010rbfox3a9770.652ENSHCOG00000007444RBFOX39470.588Hippocampus_comes
ENSIPUG00000012010rbfox3a9074.172ENSHCOG00000001863RBFOX38974.823Hippocampus_comes
ENSIPUG00000012010rbfox3a9065.472ENSSTOG00000026817RBFOX39566.044Ictidomys_tridecemlineatus
ENSIPUG00000012010rbfox3a7388.462ENSJJAG00000014167Rbfox39670.055Jaculus_jaculus
ENSIPUG00000012010rbfox3a10083.827ENSKMAG00000006726rbfox3b10081.963Kryptolebias_marmoratus
ENSIPUG00000012010rbfox3a10086.472ENSLBEG00000022508-10085.445Labrus_bergylta
ENSIPUG00000012010rbfox3a10084.097ENSLBEG00000004030rbfox3b10082.210Labrus_bergylta
ENSIPUG00000012010rbfox3a9871.989ENSLACG00000018409-10068.010Latimeria_chalumnae
ENSIPUG00000012010rbfox3a10089.552ENSLOCG00000012267rbfox3a10089.552Lepisosteus_oculatus
ENSIPUG00000012010rbfox3a9871.858ENSLAFG00000016623RBFOX39971.285Loxodonta_africana
ENSIPUG00000012010rbfox3a9069.429ENSMFAG00000002247RBFOX39668.286Macaca_fascicularis
ENSIPUG00000012010rbfox3a9081.518ENSMMUG00000023028RBFOX39579.208Macaca_mulatta
ENSIPUG00000012010rbfox3a9081.188ENSMNEG00000041147RBFOX39578.878Macaca_nemestrina
ENSIPUG00000012010rbfox3a9081.518ENSMLEG00000025686RBFOX39579.208Mandrillus_leucophaeus
ENSIPUG00000012010rbfox3a9577.987ENSMAMG00000019810rbfox3b9575.082Mastacembelus_armatus
ENSIPUG00000012010rbfox3a9880.243ENSMAMG00000020600-9976.685Mastacembelus_armatus
ENSIPUG00000012010rbfox3a9162.462ENSMZEG00005003055-5390.984Maylandia_zebra
ENSIPUG00000012010rbfox3a10084.143ENSMZEG00005000781rbfox3b10082.398Maylandia_zebra
ENSIPUG00000012010rbfox3a6674.888ENSMGAG00000005600RBFOX38376.233Meleagris_gallopavo
ENSIPUG00000012010rbfox3a9069.143ENSMAUG00000013543Rbfox39670.879Mesocricetus_auratus
ENSIPUG00000012010rbfox3a9979.217ENSMICG00000014898RBFOX39679.208Microcebus_murinus
ENSIPUG00000012010rbfox3a9070.286ENSMOCG00000015373Rbfox39671.703Microtus_ochrogaster
ENSIPUG00000012010rbfox3a10081.794ENSMMOG00000020193rbfox3b10081.003Mola_mola
ENSIPUG00000012010rbfox3a9880.243ENSMODG00000002089RBFOX310078.022Monodelphis_domestica
ENSIPUG00000012010rbfox3a10085.422ENSMALG00000018270-10085.422Monopterus_albus
ENSIPUG00000012010rbfox3a10083.024ENSMALG00000020407rbfox3b10081.432Monopterus_albus
ENSIPUG00000012010rbfox3a9081.518MGP_CAROLIEiJ_G0017487Rbfox39691.367Mus_caroli
ENSIPUG00000012010rbfox3a9081.518ENSMUSG00000025576Rbfox39691.367Mus_musculus
ENSIPUG00000012010rbfox3a9079.276MGP_PahariEiJ_G0018614Rbfox39692.086Mus_pahari
ENSIPUG00000012010rbfox3a9081.848MGP_SPRETEiJ_G0018331Rbfox39691.367Mus_spretus
ENSIPUG00000012010rbfox3a9870.400ENSMPUG00000012319RBFOX39872.703Mustela_putorius_furo
ENSIPUG00000012010rbfox3a9070.286ENSNGAG00000018006Rbfox39671.978Nannospalax_galili
ENSIPUG00000012010rbfox3a9875.380ENSNBRG00000022885-9172.700Neolamprologus_brichardi
ENSIPUG00000012010rbfox3a10082.493ENSNBRG00000010102rbfox3b10081.746Neolamprologus_brichardi
ENSIPUG00000012010rbfox3a9553.106ENSNLEG00000000153-7688.889Nomascus_leucogenys
ENSIPUG00000012010rbfox3a7585.417ENSMEUG00000004218-7586.207Notamacropus_eugenii
ENSIPUG00000012010rbfox3a7685.246ENSOPRG00000016279-7185.246Ochotona_princeps
ENSIPUG00000012010rbfox3a9082.178ENSODEG00000009433RBFOX39582.178Octodon_degus
ENSIPUG00000012010rbfox3a10083.820ENSONIG00000009549rbfox3b10081.963Oreochromis_niloticus
ENSIPUG00000012010rbfox3a9881.818ENSONIG00000007282-9880.236Oreochromis_niloticus
ENSIPUG00000012010rbfox3a10084.655ENSORLG00000000905rbfox3b7981.941Oryzias_latipes
ENSIPUG00000012010rbfox3a10084.655ENSORLG00020018030rbfox3b9981.941Oryzias_latipes_hni
ENSIPUG00000012010rbfox3a10083.827ENSORLG00015009200rbfox3b10081.698Oryzias_latipes_hsok
ENSIPUG00000012010rbfox3a8080.130ENSOMEG00000014677rbfox3b8678.274Oryzias_melastigma
ENSIPUG00000012010rbfox3a9881.459ENSOGAG00000029595RBFOX39774.457Otolemur_garnettii
ENSIPUG00000012010rbfox3a9762.751ENSOARG00000002908RBFOX39956.743Ovis_aries
ENSIPUG00000012010rbfox3a7680.156ENSPPAG00000025383RBFOX38880.156Pan_paniscus
ENSIPUG00000012010rbfox3a9070.349ENSPPRG00000007819RBFOX39670.058Panthera_pardus
ENSIPUG00000012010rbfox3a9081.518ENSPTRG00000009727RBFOX39579.208Pan_troglodytes
ENSIPUG00000012010rbfox3a9081.518ENSPANG00000019837RBFOX39579.208Papio_anubis
ENSIPUG00000012010rbfox3a10090.026ENSPKIG00000010299rbfox3a9688.728Paramormyrops_kingsleyae
ENSIPUG00000012010rbfox3a9869.231ENSPKIG00000022633-9664.903Paramormyrops_kingsleyae
ENSIPUG00000012010rbfox3a8779.205ENSPMGG00000008000rbfox3b10079.817Periophthalmus_magnuspinnatus
ENSIPUG00000012010rbfox3a9070.286ENSPEMG00000010500Rbfox39671.703Peromyscus_maniculatus_bairdii
ENSIPUG00000012010rbfox3a5376.842ENSPMAG00000008689rbfox3b9979.902Petromyzon_marinus
ENSIPUG00000012010rbfox3a9869.586ENSPCIG00000005766RBFOX39576.384Phascolarctos_cinereus
ENSIPUG00000012010rbfox3a10084.399ENSPFOG00000018294rbfox3b10082.609Poecilia_formosa
ENSIPUG00000012010rbfox3a7486.531ENSPLAG00000000481rbfox3b7885.547Poecilia_latipinna
ENSIPUG00000012010rbfox3a9575.472ENSPMEG00000022997rbfox3b9581.181Poecilia_mexicana
ENSIPUG00000012010rbfox3a10084.636ENSPREG00000012886rbfox3b10081.842Poecilia_reticulata
ENSIPUG00000012010rbfox3a8469.072ENSPPYG00000008704RBFOX39969.388Pongo_abelii
ENSIPUG00000012010rbfox3a9367.606ENSPCAG00000001401RBFOX39669.628Procavia_capensis
ENSIPUG00000012010rbfox3a9569.672ENSPCOG00000012689RBFOX39768.571Propithecus_coquereli
ENSIPUG00000012010rbfox3a7080.769ENSPVAG00000015243RBFOX39661.429Pteropus_vampyrus
ENSIPUG00000012010rbfox3a10073.925ENSPNYG00000010414rbfox3b9973.118Pundamilia_nyererei
ENSIPUG00000012010rbfox3a10076.819ENSPNYG00000009079-9674.394Pundamilia_nyererei
ENSIPUG00000012010rbfox3a10095.979ENSPNAG00000002889rbfox3a10095.979Pygocentrus_nattereri
ENSIPUG00000012010rbfox3a9565.409ENSPNAG00000018173rbfox3b8570.111Pygocentrus_nattereri
ENSIPUG00000012010rbfox3a9079.276ENSRNOG00000003386Rbfox39579.276Rattus_norvegicus
ENSIPUG00000012010rbfox3a9877.151ENSRBIG00000040449RBFOX310078.356Rhinopithecus_bieti
ENSIPUG00000012010rbfox3a9081.518ENSRROG00000000766RBFOX39579.208Rhinopithecus_roxellana
ENSIPUG00000012010rbfox3a9081.188ENSSBOG00000031591RBFOX39578.878Saimiri_boliviensis_boliviensis
ENSIPUG00000012010rbfox3a9872.576ENSSHAG00000016076RBFOX39576.384Sarcophilus_harrisii
ENSIPUG00000012010rbfox3a9870.695ENSSFOG00015004716RBFOX310069.041Scleropages_formosus
ENSIPUG00000012010rbfox3a10089.770ENSSFOG00015023260rbfox3a10089.514Scleropages_formosus
ENSIPUG00000012010rbfox3a10081.671ENSSMAG00000019052-10081.402Scophthalmus_maximus
ENSIPUG00000012010rbfox3a10080.662ENSSMAG00000012618rbfox3b8778.880Scophthalmus_maximus
ENSIPUG00000012010rbfox3a10077.898ENSSDUG00000015801-9878.841Seriola_dumerili
ENSIPUG00000012010rbfox3a9575.472ENSSDUG00000023183rbfox3b9581.181Seriola_dumerili
ENSIPUG00000012010rbfox3a10081.132ENSSLDG00000016098-9881.402Seriola_lalandi_dorsalis
ENSIPUG00000012010rbfox3a10084.097ENSSLDG00000000149rbfox3b10082.210Seriola_lalandi_dorsalis
ENSIPUG00000012010rbfox3a9079.868ENSSPUG00000011733RBFOX39578.878Sphenodon_punctatus
ENSIPUG00000012010rbfox3a8575.261ENSSPAG00000004898-7577.344Stegastes_partitus
ENSIPUG00000012010rbfox3a10076.011ENSSPAG00000017571rbfox3b9974.124Stegastes_partitus
ENSIPUG00000012010rbfox3a8286.029ENSSSCG00000039498RBFOX310074.174Sus_scrofa
ENSIPUG00000012010rbfox3a9878.869ENSTRUG00000004894rbfox3b9779.429Takifugu_rubripes
ENSIPUG00000012010rbfox3a9974.863ENSTNIG00000011278rbfox3b10069.458Tetraodon_nigroviridis
ENSIPUG00000012010rbfox3a5761.017ENSTBEG00000004296-7455.957Tupaia_belangeri
ENSIPUG00000012010rbfox3a7088.462ENSTTRG00000003676RBFOX39663.143Tursiops_truncatus
ENSIPUG00000012010rbfox3a9082.508ENSUAMG00000004668RBFOX39580.198Ursus_americanus
ENSIPUG00000012010rbfox3a9877.515ENSVVUG00000017864RBFOX39579.208Vulpes_vulpes
ENSIPUG00000012010rbfox3a9863.739ENSXETG00000020236rbfox39860.560Xenopus_tropicalis
ENSIPUG00000012010rbfox3a9883.333ENSXCOG00000018262rbfox3b10082.289Xiphophorus_couchianus
ENSIPUG00000012010rbfox3a10084.399ENSXMAG00000012939rbfox3b10082.609Xiphophorus_maculatus

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