EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000012320 (Gene tree)
Gene ID: 108271271
Gene Symbol: tdrd3
Alias: zgc:77174
Full Name: tudor domain containing 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 35857 bases
Position: chr10:4329607-4365463
Accession: 108271271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018262	TUDOR	PF00567.24	5.6e-09	1	1
ENSIPUP00000018202	TUDOR	PF00567.24	5.8e-09	1	1
ENSIPUP00000018223	TUDOR	PF00567.24	5.8e-09	1	1
ENSIPUP00000018262	SMN	PF06003.12	6.7e-09	1	1
ENSIPUP00000018202	SMN	PF06003.12	7e-09	1	1
ENSIPUP00000018223	SMN	PF06003.12	7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019040	-	5619	XM_017478732	ENSIPUP00000018262	780 (aa)	XP_017334221	A0A2D0RVL2
ENSIPUT00000019001	-	5947	-	ENSIPUP00000018223	801 (aa)	-	-
ENSIPUT00000018979	-	6030	-	ENSIPUP00000018202	801 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000012320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012320	tdrd3	99	49.116	ENSG00000083544	TDRD3	100	69.767	Homo_sapiens
ENSIPUG00000012320	tdrd3	100	57.266	ENSAPOG00000016078	tdrd3	100	57.266	Acanthochromis_polyacanthus
ENSIPUG00000012320	tdrd3	98	50.000	ENSAMEG00000000082	TDRD3	98	48.793	Ailuropoda_melanoleuca
ENSIPUG00000012320	tdrd3	100	56.312	ENSACIG00000023900	tdrd3	100	56.740	Amphilophus_citrinellus
ENSIPUG00000012320	tdrd3	100	57.509	ENSAOCG00000001410	tdrd3	100	57.509	Amphiprion_ocellaris
ENSIPUG00000012320	tdrd3	100	54.369	ENSAPEG00000022810	tdrd3	100	54.369	Amphiprion_percula
ENSIPUG00000012320	tdrd3	100	56.810	ENSATEG00000014570	tdrd3	100	55.828	Anabas_testudineus
ENSIPUG00000012320	tdrd3	99	50.317	ENSACAG00000004923	TDRD3	99	48.987	Anolis_carolinensis
ENSIPUG00000012320	tdrd3	54	55.830	ENSANAG00000027927	-	72	55.396	Aotus_nancymaae
ENSIPUG00000012320	tdrd3	98	51.026	ENSANAG00000030827	-	98	49.744	Aotus_nancymaae
ENSIPUG00000012320	tdrd3	100	56.824	ENSACLG00000022962	tdrd3	100	55.583	Astatotilapia_calliptera
ENSIPUG00000012320	tdrd3	100	71.429	ENSAMXG00000006847	tdrd3	100	71.429	Astyanax_mexicanus
ENSIPUG00000012320	tdrd3	99	51.210	ENSBTAG00000009308	TDRD3	99	47.126	Bos_taurus
ENSIPUG00000012320	tdrd3	99	50.884	ENSCJAG00000003853	TDRD3	99	48.990	Callithrix_jacchus
ENSIPUG00000012320	tdrd3	55	61.432	ENSCAFG00020018076	-	58	58.597	Canis_lupus_dingo
ENSIPUG00000012320	tdrd3	99	50.943	ENSCHIG00000020019	TDRD3	99	49.748	Capra_hircus
ENSIPUG00000012320	tdrd3	98	50.000	ENSTSYG00000002254	TDRD3	100	48.652	Carlito_syrichta
ENSIPUG00000012320	tdrd3	76	52.941	ENSCAPG00000012313	TDRD3	75	52.941	Cavia_aperea
ENSIPUG00000012320	tdrd3	78	54.241	ENSCPOG00000010437	TDRD3	78	52.941	Cavia_porcellus
ENSIPUG00000012320	tdrd3	99	50.758	ENSCCAG00000023831	TDRD3	99	49.431	Cebus_capucinus
ENSIPUG00000012320	tdrd3	99	49.433	ENSCATG00000029498	TDRD3	99	48.106	Cercocebus_atys
ENSIPUG00000012320	tdrd3	98	48.597	ENSCLAG00000002654	TDRD3	100	48.597	Chinchilla_lanigera
ENSIPUG00000012320	tdrd3	99	49.685	ENSCSAG00000017640	TDRD3	99	48.359	Chlorocebus_sabaeus
ENSIPUG00000012320	tdrd3	54	65.541	ENSCHOG00000012825	TDRD3	66	61.695	Choloepus_hoffmanni
ENSIPUG00000012320	tdrd3	98	50.572	ENSCPBG00000026646	TDRD3	99	48.231	Chrysemys_picta_bellii
ENSIPUG00000012320	tdrd3	99	49.684	ENSCANG00000034303	TDRD3	99	48.354	Colobus_angolensis_palliatus
ENSIPUG00000012320	tdrd3	99	50.639	ENSCGRG00001011297	Tdrd3	99	49.299	Cricetulus_griseus_chok1gshd
ENSIPUG00000012320	tdrd3	99	50.514	ENSCGRG00000015535	-	99	49.168	Cricetulus_griseus_crigri
ENSIPUG00000012320	tdrd3	100	54.467	ENSCSEG00000000670	tdrd3	100	57.001	Cynoglossus_semilaevis
ENSIPUG00000012320	tdrd3	94	58.124	ENSCVAG00000015641	tdrd3	100	58.256	Cyprinodon_variegatus
ENSIPUG00000012320	tdrd3	100	65.561	ENSDARG00000025421	tdrd3	100	65.140	Danio_rerio
ENSIPUG00000012320	tdrd3	98	49.555	ENSDNOG00000002011	TDRD3	98	48.473	Dasypus_novemcinctus
ENSIPUG00000012320	tdrd3	99	50.380	ENSDORG00000008714	Tdrd3	99	48.861	Dipodomys_ordii
ENSIPUG00000012320	tdrd3	57	46.552	FBgn0036450	Tdrd3	50	49.057	Drosophila_melanogaster
ENSIPUG00000012320	tdrd3	68	42.275	ENSEBUG00000011812	tdrd3	76	42.489	Eptatretus_burgeri
ENSIPUG00000012320	tdrd3	99	51.008	ENSEASG00005015575	TDRD3	99	49.811	Equus_asinus_asinus
ENSIPUG00000012320	tdrd3	99	50.879	ENSECAG00000000550	TDRD3	99	49.686	Equus_caballus
ENSIPUG00000012320	tdrd3	88	42.857	ENSEEUG00000002192	TDRD3	100	41.084	Erinaceus_europaeus
ENSIPUG00000012320	tdrd3	99	50.442	ENSFCAG00000022126	TDRD3	99	49.241	Felis_catus
ENSIPUG00000012320	tdrd3	72	66.667	ENSFALG00000007927	TDRD3	75	66.667	Ficedula_albicollis
ENSIPUG00000012320	tdrd3	98	49.936	ENSFDAG00000011552	TDRD3	100	48.531	Fukomys_damarensis
ENSIPUG00000012320	tdrd3	100	55.528	ENSFHEG00000009513	tdrd3	100	55.652	Fundulus_heteroclitus
ENSIPUG00000012320	tdrd3	78	59.050	ENSGMOG00000005733	tdrd3	100	47.477	Gadus_morhua
ENSIPUG00000012320	tdrd3	77	61.678	ENSGALG00000016936	TDRD3	79	59.091	Gallus_gallus
ENSIPUG00000012320	tdrd3	100	56.015	ENSGAFG00000012013	tdrd3	100	56.015	Gambusia_affinis
ENSIPUG00000012320	tdrd3	100	54.635	ENSGACG00000015264	tdrd3	100	54.545	Gasterosteus_aculeatus
ENSIPUG00000012320	tdrd3	99	51.399	ENSGAGG00000003173	TDRD3	99	50.191	Gopherus_agassizii
ENSIPUG00000012320	tdrd3	98	49.235	ENSGGOG00000025560	TDRD3	100	47.893	Gorilla_gorilla
ENSIPUG00000012320	tdrd3	100	56.824	ENSHBUG00000007081	tdrd3	100	55.583	Haplochromis_burtoni
ENSIPUG00000012320	tdrd3	71	51.300	ENSHGLG00000010652	-	74	54.348	Heterocephalus_glaber_female
ENSIPUG00000012320	tdrd3	100	49.312	ENSHGLG00000018707	-	100	47.935	Heterocephalus_glaber_female
ENSIPUG00000012320	tdrd3	88	43.300	ENSHGLG00000014119	-	100	41.949	Heterocephalus_glaber_female
ENSIPUG00000012320	tdrd3	98	49.299	ENSHGLG00100010966	-	100	47.893	Heterocephalus_glaber_male
ENSIPUG00000012320	tdrd3	77	69.930	ENSHGLG00100017738	-	94	69.930	Heterocephalus_glaber_male
ENSIPUG00000012320	tdrd3	100	52.809	ENSHCOG00000002157	tdrd3	100	52.809	Hippocampus_comes
ENSIPUG00000012320	tdrd3	98	50.512	ENSSTOG00000028945	-	100	50.512	Ictidomys_tridecemlineatus
ENSIPUG00000012320	tdrd3	98	47.704	ENSJJAG00000023665	Tdrd3	99	45.707	Jaculus_jaculus
ENSIPUG00000012320	tdrd3	100	56.777	ENSKMAG00000021849	tdrd3	100	56.777	Kryptolebias_marmoratus
ENSIPUG00000012320	tdrd3	94	55.355	ENSLBEG00000011777	tdrd3	99	53.470	Labrus_bergylta
ENSIPUG00000012320	tdrd3	99	51.375	ENSLACG00000001412	TDRD3	99	51.625	Latimeria_chalumnae
ENSIPUG00000012320	tdrd3	100	59.647	ENSLOCG00000004652	tdrd3	100	58.207	Lepisosteus_oculatus
ENSIPUG00000012320	tdrd3	69	41.012	ENSLAFG00000002705	TDRD3	100	41.115	Loxodonta_africana
ENSIPUG00000012320	tdrd3	99	49.685	ENSMFAG00000007606	TDRD3	99	48.359	Macaca_fascicularis
ENSIPUG00000012320	tdrd3	99	49.685	ENSMMUG00000007169	TDRD3	99	48.359	Macaca_mulatta
ENSIPUG00000012320	tdrd3	99	49.685	ENSMNEG00000002038	TDRD3	99	48.359	Macaca_nemestrina
ENSIPUG00000012320	tdrd3	55	37.723	ENSMLEG00000039737	TDRD3	98	36.758	Mandrillus_leucophaeus
ENSIPUG00000012320	tdrd3	100	57.373	ENSMAMG00000003998	tdrd3	100	55.955	Mastacembelus_armatus
ENSIPUG00000012320	tdrd3	100	56.824	ENSMZEG00005004551	tdrd3	100	55.583	Maylandia_zebra
ENSIPUG00000012320	tdrd3	77	61.609	ENSMGAG00000014961	TDRD3	79	58.986	Meleagris_gallopavo
ENSIPUG00000012320	tdrd3	99	49.936	ENSMAUG00000012562	Tdrd3	99	48.492	Mesocricetus_auratus
ENSIPUG00000012320	tdrd3	100	50.622	ENSMICG00000009982	TDRD3	100	49.315	Microcebus_murinus
ENSIPUG00000012320	tdrd3	99	48.481	ENSMOCG00000012962	Tdrd3	99	48.481	Microtus_ochrogaster
ENSIPUG00000012320	tdrd3	100	57.531	ENSMMOG00000018156	tdrd3	100	57.195	Mola_mola
ENSIPUG00000012320	tdrd3	50	69.767	ENSMODG00000006316	TDRD3	64	69.767	Monodelphis_domestica
ENSIPUG00000012320	tdrd3	96	55.128	ENSMALG00000015327	tdrd3	99	54.955	Monopterus_albus
ENSIPUG00000012320	tdrd3	100	49.305	MGP_CAROLIEiJ_G0019551	Tdrd3	100	49.305	Mus_caroli
ENSIPUG00000012320	tdrd3	100	50.126	ENSMUSG00000022019	Tdrd3	100	49.248	Mus_musculus
ENSIPUG00000012320	tdrd3	96	50.578	MGP_PahariEiJ_G0030569	Tdrd3	100	49.054	Mus_pahari
ENSIPUG00000012320	tdrd3	58	60.349	MGP_SPRETEiJ_G0020448	Tdrd3	100	49.116	Mus_spretus
ENSIPUG00000012320	tdrd3	83	46.837	ENSMPUG00000009630	TDRD3	88	45.249	Mustela_putorius_furo
ENSIPUG00000012320	tdrd3	93	47.248	ENSMLUG00000000235	TDRD3	98	45.906	Myotis_lucifugus
ENSIPUG00000012320	tdrd3	99	49.747	ENSNGAG00000004523	Tdrd3	99	48.228	Nannospalax_galili
ENSIPUG00000012320	tdrd3	100	56.753	ENSNBRG00000018789	tdrd3	100	55.831	Neolamprologus_brichardi
ENSIPUG00000012320	tdrd3	99	49.559	ENSNLEG00000015920	TDRD3	99	48.232	Nomascus_leucogenys
ENSIPUG00000012320	tdrd3	65	58.025	ENSMEUG00000010114	TDRD3	59	58.025	Notamacropus_eugenii
ENSIPUG00000012320	tdrd3	88	42.165	ENSOPRG00000007868	TDRD3	100	42.165	Ochotona_princeps
ENSIPUG00000012320	tdrd3	71	56.010	ENSODEG00000014559	-	78	53.453	Octodon_degus
ENSIPUG00000012320	tdrd3	98	49.936	ENSODEG00000000576	-	99	48.096	Octodon_degus
ENSIPUG00000012320	tdrd3	100	55.802	ENSONIG00000003233	tdrd3	100	56.040	Oreochromis_niloticus
ENSIPUG00000012320	tdrd3	52	35.561	ENSOANG00000011775	-	100	35.561	Ornithorhynchus_anatinus
ENSIPUG00000012320	tdrd3	99	50.314	ENSOCUG00000014261	TDRD3	99	50.126	Oryctolagus_cuniculus
ENSIPUG00000012320	tdrd3	100	57.266	ENSORLG00000004502	tdrd3	100	56.158	Oryzias_latipes
ENSIPUG00000012320	tdrd3	98	56.407	ENSORLG00020017271	tdrd3	100	55.653	Oryzias_latipes_hni
ENSIPUG00000012320	tdrd3	100	57.231	ENSORLG00015015519	tdrd3	100	56.119	Oryzias_latipes_hsok
ENSIPUG00000012320	tdrd3	100	55.995	ENSOMEG00000015668	tdrd3	100	55.748	Oryzias_melastigma
ENSIPUG00000012320	tdrd3	99	50.694	ENSOGAG00000005898	TDRD3	99	49.369	Otolemur_garnettii
ENSIPUG00000012320	tdrd3	98	50.953	ENSOARG00000006244	TDRD3	99	49.746	Ovis_aries
ENSIPUG00000012320	tdrd3	98	49.872	ENSPPRG00000008512	TDRD3	100	48.656	Panthera_pardus
ENSIPUG00000012320	tdrd3	98	49.872	ENSPTIG00000002537	TDRD3	100	48.656	Panthera_tigris_altaica
ENSIPUG00000012320	tdrd3	99	49.685	ENSPANG00000019138	TDRD3	99	48.359	Papio_anubis
ENSIPUG00000012320	tdrd3	100	56.329	ENSPKIG00000008894	tdrd3	100	56.329	Paramormyrops_kingsleyae
ENSIPUG00000012320	tdrd3	100	55.364	ENSPMGG00000015263	tdrd3	92	66.297	Periophthalmus_magnuspinnatus
ENSIPUG00000012320	tdrd3	99	49.684	ENSPEMG00000004287	Tdrd3	99	48.546	Peromyscus_maniculatus_bairdii
ENSIPUG00000012320	tdrd3	99	49.127	ENSPCIG00000011476	-	99	49.125	Phascolarctos_cinereus
ENSIPUG00000012320	tdrd3	100	56.250	ENSPFOG00000012450	tdrd3	100	56.250	Poecilia_formosa
ENSIPUG00000012320	tdrd3	92	55.688	ENSPLAG00000016397	tdrd3	97	55.688	Poecilia_latipinna
ENSIPUG00000012320	tdrd3	92	55.556	ENSPMEG00000019048	tdrd3	99	55.556	Poecilia_mexicana
ENSIPUG00000012320	tdrd3	100	57.019	ENSPREG00000021145	tdrd3	100	57.019	Poecilia_reticulata
ENSIPUG00000012320	tdrd3	99	48.864	ENSPPYG00000005401	TDRD3	99	47.535	Pongo_abelii
ENSIPUG00000012320	tdrd3	88	44.365	ENSPCAG00000014959	TDRD3	100	44.160	Procavia_capensis
ENSIPUG00000012320	tdrd3	77	71.560	ENSPCOG00000019937	TDRD3	100	71.560	Propithecus_coquereli
ENSIPUG00000012320	tdrd3	88	49.148	ENSPVAG00000010549	TDRD3	100	47.795	Pteropus_vampyrus
ENSIPUG00000012320	tdrd3	100	56.700	ENSPNYG00000001569	tdrd3	100	55.460	Pundamilia_nyererei
ENSIPUG00000012320	tdrd3	100	72.388	ENSPNAG00000026219	tdrd3	100	72.388	Pygocentrus_nattereri
ENSIPUG00000012320	tdrd3	99	47.415	ENSRBIG00000031218	TDRD3	99	48.228	Rhinopithecus_bieti
ENSIPUG00000012320	tdrd3	99	49.369	ENSRROG00000044516	TDRD3	99	48.167	Rhinopithecus_roxellana
ENSIPUG00000012320	tdrd3	98	51.083	ENSSBOG00000022790	TDRD3	100	49.745	Saimiri_boliviensis_boliviensis
ENSIPUG00000012320	tdrd3	55	52.403	ENSSHAG00000011994	TDRD3	57	52.644	Sarcophilus_harrisii
ENSIPUG00000012320	tdrd3	100	55.696	ENSSFOG00015005175	tdrd3	97	55.443	Scleropages_formosus
ENSIPUG00000012320	tdrd3	94	54.889	ENSSMAG00000011677	tdrd3	99	54.275	Scophthalmus_maximus
ENSIPUG00000012320	tdrd3	100	57.550	ENSSDUG00000004594	tdrd3	100	56.010	Seriola_dumerili
ENSIPUG00000012320	tdrd3	100	54.271	ENSSLDG00000002918	tdrd3	100	54.282	Seriola_lalandi_dorsalis
ENSIPUG00000012320	tdrd3	88	48.652	ENSSARG00000003028	TDRD3	100	47.009	Sorex_araneus
ENSIPUG00000012320	tdrd3	98	50.314	ENSSPUG00000001191	TDRD3	98	49.182	Sphenodon_punctatus
ENSIPUG00000012320	tdrd3	100	57.021	ENSSPAG00000005342	tdrd3	100	57.021	Stegastes_partitus
ENSIPUG00000012320	tdrd3	99	51.131	ENSSSCG00000009449	TDRD3	99	49.937	Sus_scrofa
ENSIPUG00000012320	tdrd3	96	49.808	ENSTGUG00000012476	-	57	59.091	Taeniopygia_guttata
ENSIPUG00000012320	tdrd3	94	54.342	ENSTRUG00000017194	tdrd3	94	54.737	Takifugu_rubripes
ENSIPUG00000012320	tdrd3	100	55.359	ENSTNIG00000005230	tdrd3	100	55.051	Tetraodon_nigroviridis
ENSIPUG00000012320	tdrd3	88	43.447	ENSTTRG00000010071	TDRD3	99	41.857	Tursiops_truncatus
ENSIPUG00000012320	tdrd3	92	49.590	ENSUAMG00000017369	-	98	48.290	Ursus_americanus
ENSIPUG00000012320	tdrd3	99	45.592	ENSUMAG00000014526	TDRD3	100	47.076	Ursus_maritimus
ENSIPUG00000012320	tdrd3	88	47.943	ENSVPAG00000011763	TDRD3	100	46.307	Vicugna_pacos
ENSIPUG00000012320	tdrd3	98	56.855	ENSXCOG00000001875	tdrd3	97	56.855	Xiphophorus_couchianus
ENSIPUG00000012320	tdrd3	100	56.984	ENSXMAG00000005103	tdrd3	100	56.984	Xiphophorus_maculatus