EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000012402 (Gene tree)
Gene ID: 108257111
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11688 bases
Position: chr24:19071623-19083310
Accession: 108257111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018296	IBN_N	PF03810.19	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019074	-	2598	XM_017454539	ENSIPUP00000018296	865 (aa)	XP_017310028	-

Gene Model

Click here to download ENSIPUG00000012402's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012402	kpnb1	95	88.528	ENSG00000108424	KPNB1	100	95.000	Homo_sapiens
ENSIPUG00000012402	kpnb1	95	92.700	ENSAPOG00000020572	kpnb1	99	92.700	Acanthochromis_polyacanthus
ENSIPUG00000012402	kpnb1	93	88.981	ENSAMEG00000004613	KPNB1	100	88.981	Ailuropoda_melanoleuca
ENSIPUG00000012402	kpnb1	95	92.765	ENSACIG00000023130	kpnb1	100	92.765	Amphilophus_citrinellus
ENSIPUG00000012402	kpnb1	95	92.700	ENSAOCG00000007048	kpnb1	99	92.700	Amphiprion_ocellaris
ENSIPUG00000012402	kpnb1	95	92.700	ENSAPEG00000008270	kpnb1	99	92.700	Amphiprion_percula
ENSIPUG00000012402	kpnb1	95	92.236	ENSATEG00000015139	kpnb1	95	96.244	Anabas_testudineus
ENSIPUG00000012402	kpnb1	93	88.402	ENSAPLG00000010177	KPNB1	96	88.402	Anas_platyrhynchos
ENSIPUG00000012402	kpnb1	95	88.992	ENSACAG00000007097	KPNB1	99	88.992	Anolis_carolinensis
ENSIPUG00000012402	kpnb1	95	85.764	ENSANAG00000024932	-	98	85.764	Aotus_nancymaae
ENSIPUG00000012402	kpnb1	95	92.708	ENSACLG00000015070	kpnb1	99	92.708	Astatotilapia_calliptera
ENSIPUG00000012402	kpnb1	95	94.090	ENSAMXG00000041903	kpnb1	99	94.090	Astyanax_mexicanus
ENSIPUG00000012402	kpnb1	95	88.992	ENSBTAG00000006586	KPNB1	99	88.992	Bos_taurus
ENSIPUG00000012402	kpnb1	95	46.767	WBGene00002075	imb-1	96	46.767	Caenorhabditis_elegans
ENSIPUG00000012402	kpnb1	95	88.644	ENSCJAG00000007834	KPNB1	99	88.644	Callithrix_jacchus
ENSIPUG00000012402	kpnb1	95	88.992	ENSCAFG00000016678	KPNB1	99	88.992	Canis_familiaris
ENSIPUG00000012402	kpnb1	95	89.005	ENSCAFG00020023205	KPNB1	99	89.005	Canis_lupus_dingo
ENSIPUG00000012402	kpnb1	95	89.005	ENSCHIG00000014896	KPNB1	99	89.005	Capra_hircus
ENSIPUG00000012402	kpnb1	93	88.652	ENSTSYG00000014472	KPNB1	98	88.652	Carlito_syrichta
ENSIPUG00000012402	kpnb1	93	88.731	ENSCAPG00000014185	KPNB1	100	88.731	Cavia_aperea
ENSIPUG00000012402	kpnb1	95	88.644	ENSCPOG00000006566	KPNB1	99	88.644	Cavia_porcellus
ENSIPUG00000012402	kpnb1	95	81.839	ENSCCAG00000029263	-	98	82.102	Cebus_capucinus
ENSIPUG00000012402	kpnb1	95	61.337	ENSCCAG00000018551	-	96	61.840	Cebus_capucinus
ENSIPUG00000012402	kpnb1	95	88.528	ENSCATG00000037124	KPNB1	99	88.528	Cercocebus_atys
ENSIPUG00000012402	kpnb1	95	88.528	ENSCLAG00000017091	KPNB1	99	88.528	Chinchilla_lanigera
ENSIPUG00000012402	kpnb1	95	88.528	ENSCSAG00000002605	KPNB1	99	88.528	Chlorocebus_sabaeus
ENSIPUG00000012402	kpnb1	70	83.453	ENSCHOG00000010604	KPNB1	69	83.453	Choloepus_hoffmanni
ENSIPUG00000012402	kpnb1	95	89.340	ENSCPBG00000027423	KPNB1	94	89.340	Chrysemys_picta_bellii
ENSIPUG00000012402	kpnb1	95	61.822	ENSCING00000004639	-	98	61.822	Ciona_intestinalis
ENSIPUG00000012402	kpnb1	96	59.657	ENSCSAVG00000008624	-	99	60.069	Ciona_savignyi
ENSIPUG00000012402	kpnb1	93	85.199	ENSCANG00000013489	KPNB1	100	85.075	Colobus_angolensis_palliatus
ENSIPUG00000012402	kpnb1	95	88.760	ENSCGRG00001016042	Kpnb1	99	88.760	Cricetulus_griseus_chok1gshd
ENSIPUG00000012402	kpnb1	93	88.863	ENSCGRG00000013910	Kpnb1	100	88.849	Cricetulus_griseus_crigri
ENSIPUG00000012402	kpnb1	94	89.319	ENSCSEG00000007991	kpnb1	100	89.319	Cynoglossus_semilaevis
ENSIPUG00000012402	kpnb1	95	93.163	ENSDARG00000104889	kpnb1	99	93.163	Danio_rerio
ENSIPUG00000012402	kpnb1	95	60.139	FBgn0262743	Fs(2)Ket	97	60.139	Drosophila_melanogaster
ENSIPUG00000012402	kpnb1	95	76.852	ENSEBUG00000013869	kpnb1	98	76.852	Eptatretus_burgeri
ENSIPUG00000012402	kpnb1	95	88.992	ENSEASG00005000805	KPNB1	99	88.992	Equus_asinus_asinus
ENSIPUG00000012402	kpnb1	95	89.005	ENSECAG00000014560	KPNB1	99	89.005	Equus_caballus
ENSIPUG00000012402	kpnb1	82	93.467	ENSEEUG00000005046	KPNB1	88	93.467	Erinaceus_europaeus
ENSIPUG00000012402	kpnb1	95	92.584	ENSELUG00000015847	kpnb1	99	92.584	Esox_lucius
ENSIPUG00000012402	kpnb1	95	88.992	ENSFCAG00000023994	KPNB1	99	88.992	Felis_catus
ENSIPUG00000012402	kpnb1	93	88.968	ENSFDAG00000019923	KPNB1	100	88.968	Fukomys_damarensis
ENSIPUG00000012402	kpnb1	95	91.425	ENSFHEG00000020199	kpnb1	99	91.425	Fundulus_heteroclitus
ENSIPUG00000012402	kpnb1	95	87.254	ENSGMOG00000011607	kpnb1	98	87.254	Gadus_morhua
ENSIPUG00000012402	kpnb1	95	88.644	ENSGALG00000036962	KPNB1	99	88.644	Gallus_gallus
ENSIPUG00000012402	kpnb1	95	91.425	ENSGAFG00000000783	kpnb1	99	91.425	Gambusia_affinis
ENSIPUG00000012402	kpnb1	95	87.729	ENSGACG00000014765	kpnb1	99	87.729	Gasterosteus_aculeatus
ENSIPUG00000012402	kpnb1	93	88.521	ENSGAGG00000023737	KPNB1	93	88.521	Gopherus_agassizii
ENSIPUG00000012402	kpnb1	95	88.528	ENSGGOG00000008089	KPNB1	99	88.528	Gorilla_gorilla
ENSIPUG00000012402	kpnb1	95	92.700	ENSHBUG00000016826	kpnb1	99	92.700	Haplochromis_burtoni
ENSIPUG00000012402	kpnb1	95	88.889	ENSHGLG00000014138	KPNB1	99	88.889	Heterocephalus_glaber_female
ENSIPUG00000012402	kpnb1	93	88.981	ENSHGLG00100006572	KPNB1	100	88.968	Heterocephalus_glaber_male
ENSIPUG00000012402	kpnb1	95	89.919	ENSHCOG00000002084	kpnb1	99	89.919	Hippocampus_comes
ENSIPUG00000012402	kpnb1	95	88.889	ENSSTOG00000007896	KPNB1	99	88.889	Ictidomys_tridecemlineatus
ENSIPUG00000012402	kpnb1	95	88.528	ENSJJAG00000010909	Kpnb1	99	88.528	Jaculus_jaculus
ENSIPUG00000012402	kpnb1	95	91.194	ENSKMAG00000001547	kpnb1	99	91.194	Kryptolebias_marmoratus
ENSIPUG00000012402	kpnb1	94	92.155	ENSLBEG00000025794	kpnb1	96	92.155	Labrus_bergylta
ENSIPUG00000012402	kpnb1	89	91.969	ENSLACG00000017620	KPNB1	99	91.969	Latimeria_chalumnae
ENSIPUG00000012402	kpnb1	95	92.014	ENSLOCG00000013753	kpnb1	99	92.005	Lepisosteus_oculatus
ENSIPUG00000012402	kpnb1	95	84.009	ENSLAFG00000001328	KPNB1	99	84.009	Loxodonta_africana
ENSIPUG00000012402	kpnb1	95	87.326	ENSMFAG00000030197	KPNB1	100	88.612	Macaca_fascicularis
ENSIPUG00000012402	kpnb1	95	87.514	ENSMMUG00000019760	KPNB1	99	87.514	Macaca_mulatta
ENSIPUG00000012402	kpnb1	95	88.528	ENSMNEG00000040927	KPNB1	99	88.528	Macaca_nemestrina
ENSIPUG00000012402	kpnb1	93	88.626	ENSMLEG00000038185	KPNB1	97	88.626	Mandrillus_leucophaeus
ENSIPUG00000012402	kpnb1	95	92.816	ENSMAMG00000011036	kpnb1	99	92.816	Mastacembelus_armatus
ENSIPUG00000012402	kpnb1	95	92.708	ENSMZEG00005004564	kpnb1	99	92.708	Maylandia_zebra
ENSIPUG00000012402	kpnb1	56	92.547	ENSMGAG00000002770	-	100	92.547	Meleagris_gallopavo
ENSIPUG00000012402	kpnb1	95	88.760	ENSMAUG00000006211	Kpnb1	99	88.760	Mesocricetus_auratus
ENSIPUG00000012402	kpnb1	95	88.876	ENSMICG00000012059	KPNB1	83	88.876	Microcebus_murinus
ENSIPUG00000012402	kpnb1	95	88.760	ENSMOCG00000003683	Kpnb1	99	88.760	Microtus_ochrogaster
ENSIPUG00000012402	kpnb1	95	89.224	ENSMODG00000012505	KPNB1	99	89.224	Monodelphis_domestica
ENSIPUG00000012402	kpnb1	96	92.725	ENSMALG00000000863	kpnb1	99	92.700	Monopterus_albus
ENSIPUG00000012402	kpnb1	89	93.135	MGP_CAROLIEiJ_G0017050	Kpnb1	93	93.135	Mus_caroli
ENSIPUG00000012402	kpnb1	95	88.876	ENSMUSG00000001440	Kpnb1	99	88.876	Mus_musculus
ENSIPUG00000012402	kpnb1	95	88.079	ENSMPUG00000015220	KPNB1	99	88.079	Mustela_putorius_furo
ENSIPUG00000012402	kpnb1	95	83.603	ENSMLUG00000014522	KPNB1	99	83.603	Myotis_lucifugus
ENSIPUG00000012402	kpnb1	94	87.953	ENSNGAG00000017610	Kpnb1	100	88.849	Nannospalax_galili
ENSIPUG00000012402	kpnb1	95	92.700	ENSNBRG00000019305	kpnb1	99	92.700	Neolamprologus_brichardi
ENSIPUG00000012402	kpnb1	95	88.528	ENSNLEG00000001446	KPNB1	99	88.528	Nomascus_leucogenys
ENSIPUG00000012402	kpnb1	95	83.430	ENSMEUG00000014284	KPNB1	99	83.430	Notamacropus_eugenii
ENSIPUG00000012402	kpnb1	95	88.528	ENSODEG00000017287	KPNB1	99	88.528	Octodon_degus
ENSIPUG00000012402	kpnb1	95	92.816	ENSONIG00000009269	kpnb1	99	92.816	Oreochromis_niloticus
ENSIPUG00000012402	kpnb1	95	88.876	ENSOCUG00000015425	KPNB1	99	88.876	Oryctolagus_cuniculus
ENSIPUG00000012402	kpnb1	95	92.121	ENSORLG00000019936	kpnb1	99	92.121	Oryzias_latipes
ENSIPUG00000012402	kpnb1	95	92.121	ENSORLG00020021181	kpnb1	99	92.121	Oryzias_latipes_hni
ENSIPUG00000012402	kpnb1	95	92.005	ENSORLG00015012177	kpnb1	99	92.005	Oryzias_latipes_hsok
ENSIPUG00000012402	kpnb1	95	96.114	ENSOMEG00000021022	kpnb1	99	92.236	Oryzias_melastigma
ENSIPUG00000012402	kpnb1	95	88.876	ENSOGAG00000006153	KPNB1	99	88.876	Otolemur_garnettii
ENSIPUG00000012402	kpnb1	94	88.407	ENSOARG00000008469	KPNB1	99	88.407	Ovis_aries
ENSIPUG00000012402	kpnb1	95	88.528	ENSPPAG00000028842	KPNB1	99	88.528	Pan_paniscus
ENSIPUG00000012402	kpnb1	94	88.797	ENSPPRG00000022879	KPNB1	97	88.797	Panthera_pardus
ENSIPUG00000012402	kpnb1	94	88.797	ENSPTIG00000006870	KPNB1	97	88.797	Panthera_tigris_altaica
ENSIPUG00000012402	kpnb1	95	88.528	ENSPTRG00000009333	KPNB1	99	88.528	Pan_troglodytes
ENSIPUG00000012402	kpnb1	95	88.542	ENSPANG00000022099	KPNB1	99	88.542	Papio_anubis
ENSIPUG00000012402	kpnb1	95	91.667	ENSPKIG00000017563	kpnb1	99	91.667	Paramormyrops_kingsleyae
ENSIPUG00000012402	kpnb1	93	89.324	ENSPSIG00000009775	KPNB1	100	89.324	Pelodiscus_sinensis
ENSIPUG00000012402	kpnb1	95	86.012	ENSPMGG00000001041	kpnb1	91	86.012	Periophthalmus_magnuspinnatus
ENSIPUG00000012402	kpnb1	95	88.760	ENSPEMG00000017783	Kpnb1	99	88.760	Peromyscus_maniculatus_bairdii
ENSIPUG00000012402	kpnb1	95	80.578	ENSPMAG00000007117	kpnb1	98	80.578	Petromyzon_marinus
ENSIPUG00000012402	kpnb1	95	89.108	ENSPCIG00000001034	KPNB1	99	89.108	Phascolarctos_cinereus
ENSIPUG00000012402	kpnb1	95	91.425	ENSPFOG00000009014	kpnb1	99	91.425	Poecilia_formosa
ENSIPUG00000012402	kpnb1	95	91.425	ENSPLAG00000010922	kpnb1	99	91.425	Poecilia_latipinna
ENSIPUG00000012402	kpnb1	95	91.425	ENSPREG00000012268	kpnb1	99	91.425	Poecilia_reticulata
ENSIPUG00000012402	kpnb1	95	88.065	ENSPPYG00000025935	KPNB1	99	88.065	Pongo_abelii
ENSIPUG00000012402	kpnb1	72	78.667	ENSPCAG00000002526	KPNB1	78	78.667	Procavia_capensis
ENSIPUG00000012402	kpnb1	95	88.876	ENSPCOG00000026259	KPNB1	99	88.876	Propithecus_coquereli
ENSIPUG00000012402	kpnb1	95	88.528	ENSPVAG00000004910	KPNB1	99	88.528	Pteropus_vampyrus
ENSIPUG00000012402	kpnb1	94	92.147	ENSPNYG00000017703	kpnb1	98	92.147	Pundamilia_nyererei
ENSIPUG00000012402	kpnb1	96	85.502	ENSPNAG00000024047	kpnb1	98	85.502	Pygocentrus_nattereri
ENSIPUG00000012402	kpnb1	95	88.876	ENSRNOG00000009275	Kpnb1	99	88.876	Rattus_norvegicus
ENSIPUG00000012402	kpnb1	95	88.426	ENSRBIG00000002254	KPNB1	99	88.426	Rhinopithecus_bieti
ENSIPUG00000012402	kpnb1	95	88.426	ENSRROG00000030419	KPNB1	99	88.426	Rhinopithecus_roxellana
ENSIPUG00000012402	kpnb1	95	33.760	YLR347C	KAP95	98	33.760	Saccharomyces_cerevisiae
ENSIPUG00000012402	kpnb1	95	88.528	ENSSBOG00000030025	KPNB1	93	88.528	Saimiri_boliviensis_boliviensis
ENSIPUG00000012402	kpnb1	93	89.020	ENSSHAG00000018214	KPNB1	100	89.020	Sarcophilus_harrisii
ENSIPUG00000012402	kpnb1	95	92.121	ENSSFOG00015020000	kpnb1	99	92.121	Scleropages_formosus
ENSIPUG00000012402	kpnb1	95	92.816	ENSSDUG00000016218	kpnb1	99	92.816	Seriola_dumerili
ENSIPUG00000012402	kpnb1	96	92.263	ENSSLDG00000021549	kpnb1	98	92.263	Seriola_lalandi_dorsalis
ENSIPUG00000012402	kpnb1	95	88.760	ENSSPUG00000017799	KPNB1	99	88.760	Sphenodon_punctatus
ENSIPUG00000012402	kpnb1	95	92.816	ENSSPAG00000019346	kpnb1	99	92.816	Stegastes_partitus
ENSIPUG00000012402	kpnb1	95	88.992	ENSSSCG00000017514	KPNB1	99	88.992	Sus_scrofa
ENSIPUG00000012402	kpnb1	93	83.630	ENSTGUG00000003387	KPNB1	100	83.630	Taeniopygia_guttata
ENSIPUG00000012402	kpnb1	95	89.687	ENSTRUG00000000542	kpnb1	99	89.687	Takifugu_rubripes
ENSIPUG00000012402	kpnb1	95	90.614	ENSTNIG00000006494	kpnb1	99	90.614	Tetraodon_nigroviridis
ENSIPUG00000012402	kpnb1	93	88.968	ENSTTRG00000004682	KPNB1	100	88.968	Tursiops_truncatus
ENSIPUG00000012402	kpnb1	95	89.005	ENSUAMG00000025344	KPNB1	99	89.005	Ursus_americanus
ENSIPUG00000012402	kpnb1	95	87.921	ENSUMAG00000016471	KPNB1	98	87.921	Ursus_maritimus
ENSIPUG00000012402	kpnb1	95	77.608	ENSVPAG00000003675	KPNB1	98	77.608	Vicugna_pacos
ENSIPUG00000012402	kpnb1	95	88.992	ENSVVUG00000003085	KPNB1	99	88.992	Vulpes_vulpes
ENSIPUG00000012402	kpnb1	95	87.833	ENSXETG00000014717	kpnb1	99	87.833	Xenopus_tropicalis
ENSIPUG00000012402	kpnb1	95	91.541	ENSXMAG00000018792	kpnb1	99	91.541	Xiphophorus_maculatus