EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000012459 (Gene tree)
Gene ID: 108260875
Gene Symbol: RBPMS
Alias: si:cabz01079824.1
Full Name: RNA-binding protein with multiple splicing-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 29716 bases
Position: chr29:11832861-11862576
Accession: 108260875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018357	RRM_1	PF00076.22	3.3e-11	1	1
ENSIPUP00000018391	RRM_1	PF00076.22	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019138	-	4909	XM_017461535	ENSIPUP00000018357	190 (aa)	XP_017317024	W5UDU6
ENSIPUT00000019189	-	561	-	ENSIPUP00000018406	186 (aa)	-	-
ENSIPUT00000019170	-	534	-	ENSIPUP00000018391	177 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000012459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000012459	RBPMS	92	68.478	ENSIPUG00000014032	RBPMS	92	70.652
ENSIPUG00000012459	RBPMS	98	68.878	ENSIPUG00000020981	RBPMS	99	71.823

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012459	RBPMS	99	80.105	ENSG00000157110	RBPMS	89	88.679	Homo_sapiens
ENSIPUG00000012459	RBPMS	98	89.947	ENSAPOG00000022304	RBPMS	97	89.947	Acanthochromis_polyacanthus
ENSIPUG00000012459	RBPMS	86	80.000	ENSAMEG00000001522	RBPMS	75	80.000	Ailuropoda_melanoleuca
ENSIPUG00000012459	RBPMS	63	92.437	ENSACIG00000011395	RBPMS	64	92.437	Amphilophus_citrinellus
ENSIPUG00000012459	RBPMS	98	89.947	ENSAOCG00000007731	RBPMS	97	89.947	Amphiprion_ocellaris
ENSIPUG00000012459	RBPMS	98	89.947	ENSAPEG00000023543	RBPMS	97	89.947	Amphiprion_percula
ENSIPUG00000012459	RBPMS	98	88.889	ENSATEG00000018184	RBPMS	97	88.889	Anabas_testudineus
ENSIPUG00000012459	RBPMS	92	83.240	ENSACAG00000003012	RBPMS	91	81.564	Anolis_carolinensis
ENSIPUG00000012459	RBPMS	99	80.105	ENSANAG00000028150	RBPMS	97	80.105	Aotus_nancymaae
ENSIPUG00000012459	RBPMS	98	89.418	ENSACLG00000002926	RBPMS	97	89.418	Astatotilapia_calliptera
ENSIPUG00000012459	RBPMS	100	91.667	ENSAMXG00000033491	rbpms	100	91.667	Astyanax_mexicanus
ENSIPUG00000012459	RBPMS	99	79.688	ENSBTAG00000033727	RBPMS	78	80.233	Bos_taurus
ENSIPUG00000012459	RBPMS	99	80.105	ENSCJAG00000012366	RBPMS	97	80.105	Callithrix_jacchus
ENSIPUG00000012459	RBPMS	90	80.233	ENSCAFG00000006503	RBPMS	78	80.233	Canis_familiaris
ENSIPUG00000012459	RBPMS	90	80.233	ENSCAFG00020001031	RBPMS	78	80.233	Canis_lupus_dingo
ENSIPUG00000012459	RBPMS	99	74.479	ENSCHIG00000027156	RBPMS	97	74.479	Capra_hircus
ENSIPUG00000012459	RBPMS	57	88.991	ENSTSYG00000013982	RBPMS	83	88.991	Carlito_syrichta
ENSIPUG00000012459	RBPMS	99	79.581	ENSCPOG00000038597	RBPMS	97	79.581	Cavia_porcellus
ENSIPUG00000012459	RBPMS	99	80.105	ENSCCAG00000033226	RBPMS	97	80.105	Cebus_capucinus
ENSIPUG00000012459	RBPMS	99	80.105	ENSCATG00000036486	RBPMS	97	80.105	Cercocebus_atys
ENSIPUG00000012459	RBPMS	90	83.333	ENSCLAG00000001518	RBPMS	100	83.333	Chinchilla_lanigera
ENSIPUG00000012459	RBPMS	90	80.233	ENSCSAG00000015838	RBPMS	78	80.233	Chlorocebus_sabaeus
ENSIPUG00000012459	RBPMS	81	83.871	ENSCHOG00000008745	RBPMS	79	83.871	Choloepus_hoffmanni
ENSIPUG00000012459	RBPMS	92	84.746	ENSCPBG00000013437	RBPMS	100	79.487	Chrysemys_picta_bellii
ENSIPUG00000012459	RBPMS	90	83.333	ENSCANG00000034997	RBPMS	100	83.333	Colobus_angolensis_palliatus
ENSIPUG00000012459	RBPMS	99	77.083	ENSCGRG00001002814	Rbpms	97	79.688	Cricetulus_griseus_chok1gshd
ENSIPUG00000012459	RBPMS	90	80.000	ENSCGRG00000006095	Rbpms	100	82.857	Cricetulus_griseus_crigri
ENSIPUG00000012459	RBPMS	100	88.542	ENSCSEG00000002777	rbpms	98	90.503	Cynoglossus_semilaevis
ENSIPUG00000012459	RBPMS	98	89.947	ENSCVAG00000013975	RBPMS	97	89.947	Cyprinodon_variegatus
ENSIPUG00000012459	RBPMS	88	71.006	ENSDARG00000099396	rbpms	100	71.006	Danio_rerio
ENSIPUG00000012459	RBPMS	91	79.191	ENSDNOG00000008126	RBPMS	78	79.651	Dasypus_novemcinctus
ENSIPUG00000012459	RBPMS	90	80.814	ENSETEG00000017582	RBPMS	78	80.814	Echinops_telfairi
ENSIPUG00000012459	RBPMS	81	83.871	ENSEASG00005016962	RBPMS	78	83.871	Equus_asinus_asinus
ENSIPUG00000012459	RBPMS	90	79.651	ENSECAG00000020735	RBPMS	78	83.871	Equus_caballus
ENSIPUG00000012459	RBPMS	98	87.302	ENSELUG00000009787	rbpms	97	87.302	Esox_lucius
ENSIPUG00000012459	RBPMS	99	79.581	ENSFCAG00000025639	-	97	79.581	Felis_catus
ENSIPUG00000012459	RBPMS	89	50.000	ENSFCAG00000022292	-	91	44.737	Felis_catus
ENSIPUG00000012459	RBPMS	90	83.333	ENSFDAG00000012078	RBPMS	100	83.333	Fukomys_damarensis
ENSIPUG00000012459	RBPMS	100	88.718	ENSFHEG00000000618	rbpms	100	88.718	Fundulus_heteroclitus
ENSIPUG00000012459	RBPMS	76	57.241	ENSGMOG00000009646	-	96	57.241	Gadus_morhua
ENSIPUG00000012459	RBPMS	98	89.418	ENSGAFG00000016566	RBPMS	97	89.418	Gambusia_affinis
ENSIPUG00000012459	RBPMS	99	81.152	ENSGACG00000019471	rbpms	97	81.152	Gasterosteus_aculeatus
ENSIPUG00000012459	RBPMS	61	86.207	ENSGAGG00000023634	RBPMS	54	83.065	Gopherus_agassizii
ENSIPUG00000012459	RBPMS	98	89.418	ENSHBUG00000005888	RBPMS	97	89.418	Haplochromis_burtoni
ENSIPUG00000012459	RBPMS	99	80.105	ENSHGLG00000002303	RBPMS	97	80.105	Heterocephalus_glaber_female
ENSIPUG00000012459	RBPMS	90	83.333	ENSHGLG00100008787	RBPMS	100	83.333	Heterocephalus_glaber_male
ENSIPUG00000012459	RBPMS	100	87.565	ENSHCOG00000005774	rbpms	100	87.565	Hippocampus_comes
ENSIPUG00000012459	RBPMS	99	79.581	ENSSTOG00000026546	RBPMS	97	79.581	Ictidomys_tridecemlineatus
ENSIPUG00000012459	RBPMS	99	80.105	ENSJJAG00000014024	Rbpms	97	80.105	Jaculus_jaculus
ENSIPUG00000012459	RBPMS	90	73.714	ENSKMAG00000006377	RBPMS	88	75.000	Kryptolebias_marmoratus
ENSIPUG00000012459	RBPMS	98	88.889	ENSLBEG00000027989	RBPMS	97	91.908	Labrus_bergylta
ENSIPUG00000012459	RBPMS	91	88.000	ENSLOCG00000013199	RBPMS	96	88.000	Lepisosteus_oculatus
ENSIPUG00000012459	RBPMS	90	80.233	ENSLAFG00000000209	RBPMS	78	80.233	Loxodonta_africana
ENSIPUG00000012459	RBPMS	99	80.105	ENSMFAG00000036911	RBPMS	97	80.105	Macaca_fascicularis
ENSIPUG00000012459	RBPMS	99	80.105	ENSMMUG00000000458	RBPMS	97	80.105	Macaca_mulatta
ENSIPUG00000012459	RBPMS	99	80.105	ENSMNEG00000043805	RBPMS	97	80.105	Macaca_nemestrina
ENSIPUG00000012459	RBPMS	90	83.333	ENSMLEG00000015635	RBPMS	100	83.333	Mandrillus_leucophaeus
ENSIPUG00000012459	RBPMS	66	92.000	ENSMAMG00000004604	RBPMS	65	92.000	Mastacembelus_armatus
ENSIPUG00000012459	RBPMS	98	89.418	ENSMZEG00005000698	RBPMS	99	89.503	Maylandia_zebra
ENSIPUG00000012459	RBPMS	91	82.286	ENSMGAG00000005088	RBPMS	90	82.286	Meleagris_gallopavo
ENSIPUG00000012459	RBPMS	99	77.083	ENSMAUG00000018892	Rbpms	97	79.688	Mesocricetus_auratus
ENSIPUG00000012459	RBPMS	99	77.487	ENSMICG00000001295	RBPMS	97	79.581	Microcebus_murinus
ENSIPUG00000012459	RBPMS	99	77.083	ENSMOCG00000014009	Rbpms	97	79.688	Microtus_ochrogaster
ENSIPUG00000012459	RBPMS	84	89.308	ENSMMOG00000012036	RBPMS	67	89.308	Mola_mola
ENSIPUG00000012459	RBPMS	92	83.708	ENSMODG00000019006	RBPMS	84	83.708	Monodelphis_domestica
ENSIPUG00000012459	RBPMS	98	87.831	ENSMALG00000003261	RBPMS	97	87.831	Monopterus_albus
ENSIPUG00000012459	RBPMS	99	76.562	MGP_CAROLIEiJ_G0030970	Rbpms	97	79.167	Mus_caroli
ENSIPUG00000012459	RBPMS	99	76.562	ENSMUSG00000031586	Rbpms	97	79.167	Mus_musculus
ENSIPUG00000012459	RBPMS	99	76.562	MGP_PahariEiJ_G0021439	Rbpms	97	79.167	Mus_pahari
ENSIPUG00000012459	RBPMS	99	76.562	MGP_SPRETEiJ_G0032087	Rbpms	97	79.167	Mus_spretus
ENSIPUG00000012459	RBPMS	91	77.143	ENSMPUG00000011314	RBPMS	80	77.143	Mustela_putorius_furo
ENSIPUG00000012459	RBPMS	100	79.275	ENSMLUG00000009391	RBPMS	97	81.290	Myotis_lucifugus
ENSIPUG00000012459	RBPMS	90	80.233	ENSNGAG00000011141	Rbpms	78	80.233	Nannospalax_galili
ENSIPUG00000012459	RBPMS	94	89.503	ENSNBRG00000003313	RBPMS	99	89.503	Neolamprologus_brichardi
ENSIPUG00000012459	RBPMS	99	80.105	ENSNLEG00000036183	-	97	80.105	Nomascus_leucogenys
ENSIPUG00000012459	RBPMS	66	83.333	ENSOPRG00000013151	RBPMS	57	83.333	Ochotona_princeps
ENSIPUG00000012459	RBPMS	99	80.105	ENSODEG00000006700	RBPMS	97	80.105	Octodon_degus
ENSIPUG00000012459	RBPMS	91	91.954	ENSONIG00000007546	RBPMS	100	91.954	Oreochromis_niloticus
ENSIPUG00000012459	RBPMS	90	80.233	ENSOCUG00000008572	RBPMS	78	80.233	Oryctolagus_cuniculus
ENSIPUG00000012459	RBPMS	99	87.895	ENSORLG00000004135	-	97	87.895	Oryzias_latipes
ENSIPUG00000012459	RBPMS	99	87.895	ENSORLG00020016179	RBPMS	97	87.895	Oryzias_latipes_hni
ENSIPUG00000012459	RBPMS	99	87.895	ENSORLG00015013770	RBPMS	97	87.895	Oryzias_latipes_hsok
ENSIPUG00000012459	RBPMS	98	88.360	ENSOMEG00000005044	RBPMS	97	88.360	Oryzias_melastigma
ENSIPUG00000012459	RBPMS	92	78.977	ENSOGAG00000030298	RBPMS	78	78.977	Otolemur_garnettii
ENSIPUG00000012459	RBPMS	66	80.000	ENSOARG00000010366	RBPMS	88	80.000	Ovis_aries
ENSIPUG00000012459	RBPMS	90	83.333	ENSPPAG00000033108	RBPMS	100	83.333	Pan_paniscus
ENSIPUG00000012459	RBPMS	99	79.581	ENSPPRG00000004836	RBPMS	97	79.581	Panthera_pardus
ENSIPUG00000012459	RBPMS	90	83.333	ENSPTIG00000015964	RBPMS	89	83.333	Panthera_tigris_altaica
ENSIPUG00000012459	RBPMS	99	80.105	ENSPTRG00000020135	RBPMS	97	80.105	Pan_troglodytes
ENSIPUG00000012459	RBPMS	99	80.105	ENSPANG00000008143	RBPMS	97	80.105	Papio_anubis
ENSIPUG00000012459	RBPMS	100	84.103	ENSPKIG00000000535	-	100	84.103	Paramormyrops_kingsleyae
ENSIPUG00000012459	RBPMS	97	85.027	ENSPKIG00000004836	rbpms	98	85.027	Paramormyrops_kingsleyae
ENSIPUG00000012459	RBPMS	90	83.908	ENSPSIG00000006136	RBPMS	99	83.908	Pelodiscus_sinensis
ENSIPUG00000012459	RBPMS	86	88.957	ENSPMGG00000018012	RBPMS	76	88.957	Periophthalmus_magnuspinnatus
ENSIPUG00000012459	RBPMS	99	77.720	ENSPEMG00000021130	Rbpms	97	79.275	Peromyscus_maniculatus_bairdii
ENSIPUG00000012459	RBPMS	93	82.222	ENSPCIG00000019298	-	65	83.871	Phascolarctos_cinereus
ENSIPUG00000012459	RBPMS	98	89.418	ENSPFOG00000017158	RBPMS	97	89.418	Poecilia_formosa
ENSIPUG00000012459	RBPMS	98	89.418	ENSPLAG00000010767	RBPMS	97	89.418	Poecilia_latipinna
ENSIPUG00000012459	RBPMS	98	89.418	ENSPMEG00000009788	RBPMS	97	89.418	Poecilia_mexicana
ENSIPUG00000012459	RBPMS	98	89.418	ENSPREG00000016959	RBPMS	97	89.418	Poecilia_reticulata
ENSIPUG00000012459	RBPMS	90	80.233	ENSPPYG00000018487	RBPMS	76	82.308	Pongo_abelii
ENSIPUG00000012459	RBPMS	57	88.991	ENSPCAG00000013493	-	99	88.991	Procavia_capensis
ENSIPUG00000012459	RBPMS	76	73.288	ENSPCOG00000015948	RBPMS	75	80.000	Propithecus_coquereli
ENSIPUG00000012459	RBPMS	91	78.736	ENSPVAG00000001661	RBPMS	79	78.736	Pteropus_vampyrus
ENSIPUG00000012459	RBPMS	98	89.418	ENSPNYG00000001172	RBPMS	99	89.503	Pundamilia_nyererei
ENSIPUG00000012459	RBPMS	100	91.667	ENSPNAG00000029160	RBPMS	100	91.667	Pygocentrus_nattereri
ENSIPUG00000012459	RBPMS	92	75.706	ENSRNOG00000013328	Rbpms	85	78.531	Rattus_norvegicus
ENSIPUG00000012459	RBPMS	90	83.333	ENSRBIG00000038218	RBPMS	100	83.333	Rhinopithecus_bieti
ENSIPUG00000012459	RBPMS	99	80.105	ENSRROG00000042518	RBPMS	97	80.105	Rhinopithecus_roxellana
ENSIPUG00000012459	RBPMS	99	80.628	ENSSBOG00000026670	RBPMS	97	80.628	Saimiri_boliviensis_boliviensis
ENSIPUG00000012459	RBPMS	91	84.000	ENSSHAG00000010114	RBPMS	90	84.000	Sarcophilus_harrisii
ENSIPUG00000012459	RBPMS	100	84.103	ENSSFOG00015000417	rbpms	100	84.103	Scleropages_formosus
ENSIPUG00000012459	RBPMS	91	86.782	ENSSFOG00015017481	-	98	85.027	Scleropages_formosus
ENSIPUG00000012459	RBPMS	100	87.692	ENSSMAG00000010871	rbpms	100	87.692	Scophthalmus_maximus
ENSIPUG00000012459	RBPMS	98	89.418	ENSSDUG00000010894	RBPMS	97	89.418	Seriola_dumerili
ENSIPUG00000012459	RBPMS	98	89.418	ENSSLDG00000012916	RBPMS	97	89.418	Seriola_lalandi_dorsalis
ENSIPUG00000012459	RBPMS	91	75.141	ENSSARG00000000274	RBPMS	81	75.141	Sorex_araneus
ENSIPUG00000012459	RBPMS	91	83.523	ENSSPUG00000017525	RBPMS	67	83.523	Sphenodon_punctatus
ENSIPUG00000012459	RBPMS	90	73.410	ENSSPAG00000004777	rbpms	78	89.922	Stegastes_partitus
ENSIPUG00000012459	RBPMS	99	79.581	ENSSSCG00000015846	RBPMS	97	79.581	Sus_scrofa
ENSIPUG00000012459	RBPMS	92	83.051	ENSTGUG00000001776	RBPMS	93	83.051	Taeniopygia_guttata
ENSIPUG00000012459	RBPMS	98	88.360	ENSTRUG00000000041	RBPMS	97	88.360	Takifugu_rubripes
ENSIPUG00000012459	RBPMS	90	79.532	ENSTTRG00000012451	RBPMS	78	79.532	Tursiops_truncatus
ENSIPUG00000012459	RBPMS	61	84.483	ENSUAMG00000026353	RBPMS	76	84.483	Ursus_americanus
ENSIPUG00000012459	RBPMS	85	82.209	ENSUMAG00000007347	RBPMS	76	83.333	Ursus_maritimus
ENSIPUG00000012459	RBPMS	81	83.871	ENSVPAG00000010991	RBPMS	79	83.871	Vicugna_pacos
ENSIPUG00000012459	RBPMS	99	80.105	ENSVVUG00000019770	RBPMS	97	80.105	Vulpes_vulpes
ENSIPUG00000012459	RBPMS	90	83.908	ENSXETG00000011290	rbpms	100	83.908	Xenopus_tropicalis
ENSIPUG00000012459	RBPMS	91	85.632	ENSXCOG00000002436	RBPMS	90	85.965	Xiphophorus_couchianus
ENSIPUG00000012459	RBPMS	98	89.418	ENSXMAG00000027637	RBPMS	97	89.418	Xiphophorus_maculatus