EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000012509 (Gene tree)
Gene ID: 108279914
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-19-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4260 bases
Position: chr19:12387862-12392121
Accession: 108279914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018400	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019183	-	1414	XM_017494543	ENSIPUP00000018400	220 (aa)	XP_017350032	A0A2D0T548

Gene Model

Click here to download ENSIPUG00000012509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000012509	-	87	35.204	ENSIPUG00000014035	rab9a	91	35.204
ENSIPUG00000012509	-	75	43.976	ENSIPUG00000007415	rab14	77	43.976
ENSIPUG00000012509	-	77	44.253	ENSIPUG00000014269	rab33a	75	44.253
ENSIPUG00000012509	-	100	56.364	ENSIPUG00000016261	RAB19	98	56.364
ENSIPUG00000012509	-	79	32.967	ENSIPUG00000022673	rab36	67	32.967
ENSIPUG00000012509	-	97	36.150	ENSIPUG00000006126	Rab25	98	36.150
ENSIPUG00000012509	-	97	36.239	ENSIPUG00000025100	rab11b	97	36.239
ENSIPUG00000012509	-	81	44.944	ENSIPUG00000008650	rab1a	88	44.944
ENSIPUG00000012509	-	74	42.593	ENSIPUG00000020082	rab5c	76	42.593
ENSIPUG00000012509	-	65	34.507	ENSIPUG00000016494	rab23	77	33.540
ENSIPUG00000012509	-	77	45.562	ENSIPUG00000011489	Rab35	83	45.562
ENSIPUG00000012509	-	75	36.747	ENSIPUG00000016561	rab9b	75	36.747
ENSIPUG00000012509	-	77	52.941	ENSIPUG00000021010	Rab30	84	52.941
ENSIPUG00000012509	-	93	37.073	ENSIPUG00000019382	rab41	92	37.073
ENSIPUG00000012509	-	75	43.373	ENSIPUG00000015525	-	77	43.373
ENSIPUG00000012509	-	77	42.941	ENSIPUG00000019237	rab15	80	42.941
ENSIPUG00000012509	-	94	38.073	ENSIPUG00000017684	rab33b	88	38.073
ENSIPUG00000012509	-	81	48.315	ENSIPUG00000020508	rab1ab	88	48.315
ENSIPUG00000012509	-	77	46.471	ENSIPUG00000003199	rab13	84	46.471
ENSIPUG00000012509	-	79	39.548	ENSIPUG00000010859	rab18b	85	39.548
ENSIPUG00000012509	-	93	35.648	ENSIPUG00000017447	rab34a	79	35.648
ENSIPUG00000012509	-	93	37.073	ENSIPUG00000021740	rab6a	94	37.073
ENSIPUG00000012509	-	77	45.349	ENSIPUG00000011376	rab42a	78	45.349
ENSIPUG00000012509	-	80	44.382	ENSIPUG00000024622	rab35	88	44.382
ENSIPUG00000012509	-	76	41.916	ENSIPUG00000020226	RAB15	81	41.916
ENSIPUG00000012509	-	74	41.358	ENSIPUG00000018098	rab6b	77	41.358
ENSIPUG00000012509	-	77	37.572	ENSIPUG00000017200	-	81	37.572
ENSIPUG00000012509	-	90	37.681	ENSIPUG00000020833	rab39b	97	37.681
ENSIPUG00000012509	-	87	39.000	ENSIPUG00000024203	rab39ba	93	39.000
ENSIPUG00000012509	-	97	36.697	ENSIPUG00000019927	rab11bb	97	36.697
ENSIPUG00000012509	-	82	38.378	ENSIPUG00000007246	rab7a	87	38.378
ENSIPUG00000012509	-	97	38.532	ENSIPUG00000022394	zgc:101559	89	38.532
ENSIPUG00000012509	-	76	42.515	ENSIPUG00000006091	RAB11A	76	42.515
ENSIPUG00000012509	-	74	41.358	ENSIPUG00000015058	rab6b	77	41.358
ENSIPUG00000012509	-	78	39.306	ENSIPUG00000010794	rab22a	87	39.306
ENSIPUG00000012509	-	61	45.588	ENSIPUG00000009784	-	59	45.588
ENSIPUG00000012509	-	74	41.358	ENSIPUG00000023392	rab5a	74	41.358
ENSIPUG00000012509	-	77	46.154	ENSIPUG00000007539	rab2a	79	46.154
ENSIPUG00000012509	-	97	38.288	ENSIPUG00000021401	Rab11a	97	38.288
ENSIPUG00000012509	-	75	39.157	ENSIPUG00000012218	RAB25	78	39.157
ENSIPUG00000012509	-	77	39.306	ENSIPUG00000022445	RAB7A	81	39.306
ENSIPUG00000012509	-	78	39.766	ENSIPUG00000017401	rab12	70	39.766
ENSIPUG00000012509	-	86	45.789	ENSIPUG00000017890	Rab1A	93	45.789
ENSIPUG00000012509	-	70	38.065	ENSIPUG00000018050	RAB31	79	38.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012509	-	70	74.675	ENSAOCG00000015948	-	74	74.675	Amphiprion_ocellaris
ENSIPUG00000012509	-	99	64.706	ENSATEG00000012781	-	99	64.706	Anabas_testudineus
ENSIPUG00000012509	-	99	66.816	ENSACLG00000000860	-	99	66.816	Astatotilapia_calliptera
ENSIPUG00000012509	-	100	74.091	ENSAMXG00000039737	RAB19	100	74.091	Astyanax_mexicanus
ENSIPUG00000012509	-	96	59.722	ENSCPBG00000011914	RAB19	96	59.722	Chrysemys_picta_bellii
ENSIPUG00000012509	-	99	66.063	ENSCSEG00000010402	-	99	66.063	Cynoglossus_semilaevis
ENSIPUG00000012509	-	100	57.727	ENSFALG00000003709	RAB19	99	57.727	Ficedula_albicollis
ENSIPUG00000012509	-	99	64.414	ENSGACG00000018847	-	99	64.414	Gasterosteus_aculeatus
ENSIPUG00000012509	-	95	60.577	ENSGAGG00000013139	RAB19	93	60.577	Gopherus_agassizii
ENSIPUG00000012509	-	99	64.159	ENSKMAG00000012657	-	99	64.159	Kryptolebias_marmoratus
ENSIPUG00000012509	-	84	72.973	ENSMZEG00005010813	-	89	72.973	Maylandia_zebra
ENSIPUG00000012509	-	96	66.667	ENSONIG00000016851	-	99	66.667	Oreochromis_niloticus
ENSIPUG00000012509	-	96	67.290	ENSPMGG00000007381	-	97	67.290	Periophthalmus_magnuspinnatus
ENSIPUG00000012509	-	99	62.727	ENSPMGG00000009466	RAB19	98	62.727	Periophthalmus_magnuspinnatus
ENSIPUG00000012509	-	96	68.203	ENSPNYG00000008498	-	96	68.203	Pundamilia_nyererei
ENSIPUG00000012509	-	100	62.727	ENSTNIG00000006650	RAB19	99	62.727	Tetraodon_nigroviridis
ENSIPUG00000012509	-	99	63.229	ENSTNIG00000018498	-	99	63.229	Tetraodon_nigroviridis