EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000012540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5978 bases
Position: chr12:3889430-3895407
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018444	Exo_endo_phos	PF03372.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019228	-	1314	-	ENSIPUP00000018444	437 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000012540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000012540	-	81	79.437	ENSIPUG00000013055	-	71	79.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012540	-	59	35.741	ENSACLG00000004686	-	61	35.741	Astatotilapia_calliptera
ENSIPUG00000012540	-	87	53.846	ENSAMXG00000034279	-	73	53.846	Astyanax_mexicanus
ENSIPUG00000012540	-	58	37.597	ENSAMXG00000029153	-	51	37.597	Astyanax_mexicanus
ENSIPUG00000012540	-	77	62.537	ENSAMXG00000035618	-	74	62.537	Astyanax_mexicanus
ENSIPUG00000012540	-	55	32.114	ENSGMOG00000012912	-	98	32.114	Gadus_morhua
ENSIPUG00000012540	-	57	34.109	ENSORLG00015003248	-	52	34.109	Oryzias_latipes_hsok
ENSIPUG00000012540	-	65	65.505	ENSSFOG00015018010	-	57	65.505	Scleropages_formosus