EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000012657 (Gene tree)
Gene ID: 100528195
Gene Symbol: rabl3
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7025 bases
Position: chr6:29656491-29663515
Accession: 100528195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018730	MMR_HSR1	PF01926.23	7.6e-06	1	1
ENSIPUP00000018697	MMR_HSR1	PF01926.23	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019491	-	3770	-	ENSIPUP00000018697	231 (aa)	-	-
ENSIPUT00000019524	-	3616	-	ENSIPUP00000018730	233 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000012657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000012657	rabl3	62	30.345	ENSIPUG00000022394	zgc:101559	51	30.345
ENSIPUG00000012657	rabl3	52	30.328	ENSIPUG00000009784	-	51	30.328
ENSIPUG00000012657	rabl3	54	32.000	ENSIPUG00000020833	rab39b	55	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012657	rabl3	100	85.593	ENSG00000144840	RABL3	100	92.248	Homo_sapiens
ENSIPUG00000012657	rabl3	100	92.308	ENSAPOG00000024479	rabl3	100	92.308	Acanthochromis_polyacanthus
ENSIPUG00000012657	rabl3	100	86.441	ENSAMEG00000004809	RABL3	100	86.441	Ailuropoda_melanoleuca
ENSIPUG00000012657	rabl3	100	89.270	ENSACIG00000014343	rabl3	100	89.270	Amphilophus_citrinellus
ENSIPUG00000012657	rabl3	100	92.308	ENSAOCG00000011851	rabl3	100	92.308	Amphiprion_ocellaris
ENSIPUG00000012657	rabl3	100	92.308	ENSAPEG00000011214	rabl3	100	92.308	Amphiprion_percula
ENSIPUG00000012657	rabl3	100	92.704	ENSATEG00000003503	rabl3	100	92.704	Anabas_testudineus
ENSIPUG00000012657	rabl3	100	82.203	ENSACAG00000011313	-	100	82.203	Anolis_carolinensis
ENSIPUG00000012657	rabl3	100	87.712	ENSANAG00000027278	RABL3	100	87.712	Aotus_nancymaae
ENSIPUG00000012657	rabl3	100	91.845	ENSACLG00000009820	rabl3	100	91.845	Astatotilapia_calliptera
ENSIPUG00000012657	rabl3	100	94.421	ENSAMXG00000038716	rabl3	100	94.421	Astyanax_mexicanus
ENSIPUG00000012657	rabl3	100	88.136	ENSBTAG00000015898	RABL3	100	88.136	Bos_taurus
ENSIPUG00000012657	rabl3	100	87.712	ENSCJAG00000008611	RABL3	100	87.712	Callithrix_jacchus
ENSIPUG00000012657	rabl3	100	87.288	ENSCAFG00000011292	RABL3	89	87.288	Canis_familiaris
ENSIPUG00000012657	rabl3	100	87.288	ENSCAFG00020006397	RABL3	100	87.288	Canis_lupus_dingo
ENSIPUG00000012657	rabl3	100	88.136	ENSCHIG00000017365	RABL3	100	88.136	Capra_hircus
ENSIPUG00000012657	rabl3	100	86.017	ENSCPOG00000009645	RABL3	100	86.017	Cavia_porcellus
ENSIPUG00000012657	rabl3	100	86.017	ENSCATG00000032561	RABL3	100	86.017	Cercocebus_atys
ENSIPUG00000012657	rabl3	100	85.593	ENSCLAG00000010855	RABL3	100	85.593	Chinchilla_lanigera
ENSIPUG00000012657	rabl3	99	86.266	ENSCSAG00000007155	RABL3	100	86.266	Chlorocebus_sabaeus
ENSIPUG00000012657	rabl3	100	87.288	ENSCPBG00000001999	RABL3	100	87.288	Chrysemys_picta_bellii
ENSIPUG00000012657	rabl3	100	86.017	ENSCANG00000031684	RABL3	100	86.017	Colobus_angolensis_palliatus
ENSIPUG00000012657	rabl3	100	84.746	ENSCGRG00001021537	Rabl3	100	84.746	Cricetulus_griseus_chok1gshd
ENSIPUG00000012657	rabl3	100	84.746	ENSCGRG00000002114	Rabl3	100	84.746	Cricetulus_griseus_crigri
ENSIPUG00000012657	rabl3	100	80.258	ENSCSEG00000014982	rabl3	100	80.258	Cynoglossus_semilaevis
ENSIPUG00000012657	rabl3	100	77.253	ENSCVAG00000009904	rabl3	91	92.135	Cyprinodon_variegatus
ENSIPUG00000012657	rabl3	100	91.416	ENSDARG00000040959	rabl3	100	91.416	Danio_rerio
ENSIPUG00000012657	rabl3	100	85.169	ENSDNOG00000008174	RABL3	100	85.169	Dasypus_novemcinctus
ENSIPUG00000012657	rabl3	100	86.441	ENSETEG00000010206	RABL3	100	86.441	Echinops_telfairi
ENSIPUG00000012657	rabl3	100	87.712	ENSECAG00000023059	RABL3	100	87.712	Equus_caballus
ENSIPUG00000012657	rabl3	100	81.356	ENSEEUG00000002897	RABL3	100	81.356	Erinaceus_europaeus
ENSIPUG00000012657	rabl3	100	92.275	ENSELUG00000014758	rabl3	100	92.275	Esox_lucius
ENSIPUG00000012657	rabl3	100	87.288	ENSFCAG00000031879	RABL3	100	77.542	Felis_catus
ENSIPUG00000012657	rabl3	100	85.593	ENSFALG00000005296	RABL3	100	85.593	Ficedula_albicollis
ENSIPUG00000012657	rabl3	100	86.809	ENSFDAG00000000307	RABL3	100	86.809	Fukomys_damarensis
ENSIPUG00000012657	rabl3	100	92.275	ENSFHEG00000011273	rabl3	100	92.275	Fundulus_heteroclitus
ENSIPUG00000012657	rabl3	100	90.987	ENSGMOG00000007845	rabl3	100	90.987	Gadus_morhua
ENSIPUG00000012657	rabl3	100	86.864	ENSGALG00000014949	RABL3	100	86.864	Gallus_gallus
ENSIPUG00000012657	rabl3	100	89.700	ENSGAFG00000015953	rabl3	100	89.700	Gambusia_affinis
ENSIPUG00000012657	rabl3	100	89.270	ENSGACG00000007387	rabl3	100	93.023	Gasterosteus_aculeatus
ENSIPUG00000012657	rabl3	100	87.712	ENSGAGG00000003677	RABL3	100	87.712	Gopherus_agassizii
ENSIPUG00000012657	rabl3	100	85.593	ENSGGOG00000006059	RABL3	100	85.593	Gorilla_gorilla
ENSIPUG00000012657	rabl3	100	92.275	ENSHBUG00000019478	rabl3	93	92.275	Haplochromis_burtoni
ENSIPUG00000012657	rabl3	100	86.809	ENSHGLG00000014491	RABL3	100	86.809	Heterocephalus_glaber_female
ENSIPUG00000012657	rabl3	100	86.809	ENSHGLG00100004866	RABL3	100	86.809	Heterocephalus_glaber_male
ENSIPUG00000012657	rabl3	100	78.541	ENSHCOG00000019245	rabl3	91	93.258	Hippocampus_comes
ENSIPUG00000012657	rabl3	100	85.593	ENSSTOG00000019452	RABL3	100	85.593	Ictidomys_tridecemlineatus
ENSIPUG00000012657	rabl3	100	76.271	ENSJJAG00000023553	Rabl3	100	76.271	Jaculus_jaculus
ENSIPUG00000012657	rabl3	100	87.124	ENSKMAG00000015464	rabl3	100	87.124	Kryptolebias_marmoratus
ENSIPUG00000012657	rabl3	100	91.880	ENSLBEG00000010627	-	100	91.880	Labrus_bergylta
ENSIPUG00000012657	rabl3	100	91.880	ENSLBEG00000020595	rabl3	100	91.880	Labrus_bergylta
ENSIPUG00000012657	rabl3	100	87.288	ENSLOCG00000006265	rabl3	100	87.288	Lepisosteus_oculatus
ENSIPUG00000012657	rabl3	100	87.288	ENSLAFG00000003711	RABL3	100	87.288	Loxodonta_africana
ENSIPUG00000012657	rabl3	100	86.017	ENSMFAG00000031923	RABL3	100	86.017	Macaca_fascicularis
ENSIPUG00000012657	rabl3	100	76.271	ENSMMUG00000001594	RABL3	100	76.271	Macaca_mulatta
ENSIPUG00000012657	rabl3	100	86.017	ENSMNEG00000043980	RABL3	100	86.017	Macaca_nemestrina
ENSIPUG00000012657	rabl3	100	86.017	ENSMLEG00000028177	RABL3	100	86.017	Mandrillus_leucophaeus
ENSIPUG00000012657	rabl3	100	91.845	ENSMAMG00000015155	rabl3	100	91.845	Mastacembelus_armatus
ENSIPUG00000012657	rabl3	100	91.845	ENSMZEG00005002607	rabl3	100	91.845	Maylandia_zebra
ENSIPUG00000012657	rabl3	100	84.746	ENSMAUG00000013022	Rabl3	100	84.746	Mesocricetus_auratus
ENSIPUG00000012657	rabl3	100	86.864	ENSMICG00000049288	RABL3	100	86.864	Microcebus_murinus
ENSIPUG00000012657	rabl3	100	84.322	ENSMOCG00000015237	Rabl3	100	84.322	Microtus_ochrogaster
ENSIPUG00000012657	rabl3	100	88.841	ENSMMOG00000005628	rabl3	100	88.841	Mola_mola
ENSIPUG00000012657	rabl3	100	85.593	ENSMODG00000018232	RABL3	100	85.593	Monodelphis_domestica
ENSIPUG00000012657	rabl3	100	86.864	ENSMALG00000018837	rabl3	100	86.864	Monopterus_albus
ENSIPUG00000012657	rabl3	100	84.746	MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	Mus_caroli
ENSIPUG00000012657	rabl3	100	84.746	ENSMUSG00000022827	Rabl3	100	93.023	Mus_musculus
ENSIPUG00000012657	rabl3	100	84.322	MGP_PahariEiJ_G0016429	Rabl3	100	93.023	Mus_pahari
ENSIPUG00000012657	rabl3	100	84.746	MGP_SPRETEiJ_G0021628	Rabl3	100	93.023	Mus_spretus
ENSIPUG00000012657	rabl3	100	87.288	ENSMPUG00000008257	RABL3	89	87.288	Mustela_putorius_furo
ENSIPUG00000012657	rabl3	100	86.017	ENSMLUG00000014113	RABL3	100	86.017	Myotis_lucifugus
ENSIPUG00000012657	rabl3	99	76.957	ENSNGAG00000001939	Rabl3	99	76.957	Nannospalax_galili
ENSIPUG00000012657	rabl3	96	91.403	ENSNBRG00000012423	rabl3	94	91.403	Neolamprologus_brichardi
ENSIPUG00000012657	rabl3	100	85.593	ENSNLEG00000031723	RABL3	100	85.593	Nomascus_leucogenys
ENSIPUG00000012657	rabl3	100	85.169	ENSMEUG00000006606	RABL3	100	85.169	Notamacropus_eugenii
ENSIPUG00000012657	rabl3	100	85.593	ENSODEG00000004758	-	100	85.593	Octodon_degus
ENSIPUG00000012657	rabl3	100	92.704	ENSONIG00000004281	rabl3	100	92.704	Oreochromis_niloticus
ENSIPUG00000012657	rabl3	99	85.043	ENSOANG00000003928	RABL3	99	85.043	Ornithorhynchus_anatinus
ENSIPUG00000012657	rabl3	100	90.558	ENSORLG00000020457	rabl3	100	90.558	Oryzias_latipes
ENSIPUG00000012657	rabl3	100	90.558	ENSORLG00020008991	rabl3	100	86.695	Oryzias_latipes_hni
ENSIPUG00000012657	rabl3	100	90.558	ENSORLG00015005649	rabl3	88	90.558	Oryzias_latipes_hsok
ENSIPUG00000012657	rabl3	100	91.845	ENSOMEG00000015066	rabl3	100	91.845	Oryzias_melastigma
ENSIPUG00000012657	rabl3	100	86.441	ENSOGAG00000005961	RABL3	100	86.441	Otolemur_garnettii
ENSIPUG00000012657	rabl3	100	88.136	ENSOARG00000019939	RABL3	100	88.136	Ovis_aries
ENSIPUG00000012657	rabl3	94	84.685	ENSPPAG00000036997	RABL3	87	84.685	Pan_paniscus
ENSIPUG00000012657	rabl3	100	87.288	ENSPPRG00000016325	RABL3	100	87.288	Panthera_pardus
ENSIPUG00000012657	rabl3	100	87.288	ENSPTIG00000018021	RABL3	100	87.288	Panthera_tigris_altaica
ENSIPUG00000012657	rabl3	100	85.593	ENSPTRG00000015272	RABL3	100	85.593	Pan_troglodytes
ENSIPUG00000012657	rabl3	100	86.017	ENSPANG00000001339	RABL3	100	86.017	Papio_anubis
ENSIPUG00000012657	rabl3	100	90.558	ENSPKIG00000007818	rabl3	100	90.558	Paramormyrops_kingsleyae
ENSIPUG00000012657	rabl3	100	86.441	ENSPSIG00000011358	RABL3	100	86.441	Pelodiscus_sinensis
ENSIPUG00000012657	rabl3	100	87.124	ENSPMGG00000015794	rabl3	100	87.124	Periophthalmus_magnuspinnatus
ENSIPUG00000012657	rabl3	100	84.746	ENSPEMG00000016913	Rabl3	100	84.746	Peromyscus_maniculatus_bairdii
ENSIPUG00000012657	rabl3	100	85.593	ENSPCIG00000018922	RABL3	100	85.593	Phascolarctos_cinereus
ENSIPUG00000012657	rabl3	100	91.416	ENSPFOG00000008586	rabl3	100	91.416	Poecilia_formosa
ENSIPUG00000012657	rabl3	100	91.416	ENSPLAG00000014482	rabl3	100	91.416	Poecilia_latipinna
ENSIPUG00000012657	rabl3	100	91.416	ENSPMEG00000002295	rabl3	100	91.416	Poecilia_mexicana
ENSIPUG00000012657	rabl3	100	91.416	ENSPREG00000014815	rabl3	100	91.416	Poecilia_reticulata
ENSIPUG00000012657	rabl3	100	86.017	ENSPPYG00000013501	RABL3	100	86.017	Pongo_abelii
ENSIPUG00000012657	rabl3	100	87.288	ENSPCOG00000022230	RABL3	100	87.288	Propithecus_coquereli
ENSIPUG00000012657	rabl3	100	86.017	ENSPVAG00000010013	RABL3	100	86.017	Pteropus_vampyrus
ENSIPUG00000012657	rabl3	100	92.275	ENSPNYG00000006659	rabl3	100	92.275	Pundamilia_nyererei
ENSIPUG00000012657	rabl3	100	96.137	ENSPNAG00000000748	rabl3	100	96.137	Pygocentrus_nattereri
ENSIPUG00000012657	rabl3	100	84.322	ENSRNOG00000026085	Rabl3	100	84.322	Rattus_norvegicus
ENSIPUG00000012657	rabl3	100	86.017	ENSRBIG00000040941	RABL3	100	86.017	Rhinopithecus_bieti
ENSIPUG00000012657	rabl3	100	86.017	ENSRROG00000043745	RABL3	100	86.017	Rhinopithecus_roxellana
ENSIPUG00000012657	rabl3	100	87.712	ENSSBOG00000004022	RABL3	100	87.712	Saimiri_boliviensis_boliviensis
ENSIPUG00000012657	rabl3	100	84.746	ENSSHAG00000012233	RABL3	100	84.746	Sarcophilus_harrisii
ENSIPUG00000012657	rabl3	100	90.987	ENSSFOG00015010171	rabl3	100	90.987	Scleropages_formosus
ENSIPUG00000012657	rabl3	100	91.453	ENSSMAG00000002403	rabl3	100	91.453	Scophthalmus_maximus
ENSIPUG00000012657	rabl3	100	93.133	ENSSDUG00000012078	rabl3	100	93.133	Seriola_dumerili
ENSIPUG00000012657	rabl3	100	93.562	ENSSLDG00000021899	rabl3	100	93.562	Seriola_lalandi_dorsalis
ENSIPUG00000012657	rabl3	100	86.864	ENSSARG00000008316	RABL3	100	86.864	Sorex_araneus
ENSIPUG00000012657	rabl3	100	87.288	ENSSPUG00000017490	RABL3	100	87.288	Sphenodon_punctatus
ENSIPUG00000012657	rabl3	100	92.704	ENSSPAG00000011642	rabl3	100	92.704	Stegastes_partitus
ENSIPUG00000012657	rabl3	100	87.712	ENSSSCG00000035258	RABL3	100	87.712	Sus_scrofa
ENSIPUG00000012657	rabl3	100	86.017	ENSTGUG00000013374	RABL3	100	86.017	Taeniopygia_guttata
ENSIPUG00000012657	rabl3	78	90.608	ENSTRUG00000007846	RABL3	100	95.312	Takifugu_rubripes
ENSIPUG00000012657	rabl3	100	74.153	ENSTBEG00000005153	RABL3	100	74.153	Tupaia_belangeri
ENSIPUG00000012657	rabl3	100	86.441	ENSUAMG00000005299	RABL3	100	86.441	Ursus_americanus
ENSIPUG00000012657	rabl3	100	86.017	ENSUMAG00000025256	RABL3	89	86.017	Ursus_maritimus
ENSIPUG00000012657	rabl3	100	87.712	ENSVPAG00000003776	RABL3	100	87.712	Vicugna_pacos
ENSIPUG00000012657	rabl3	100	87.288	ENSVVUG00000022300	RABL3	89	87.288	Vulpes_vulpes
ENSIPUG00000012657	rabl3	100	90.987	ENSXMAG00000003244	rabl3	100	90.987	Xiphophorus_maculatus