EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000012659 (Gene tree)
Gene ID: 108256285
Gene Symbol: mylk5
Alias: im:7148400|mlck|si:dkey-194j22.6
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 33090 bases
Position: chr2:3462988-3496077
Accession: 108256285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018694	RIO1	PF01163.22	1.7e-07	1	1
ENSIPUP00000018652	RIO1	PF01163.22	1.7e-07	1	1
ENSIPUP00000018734	RIO1	PF01163.22	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019444	-	6717	XM_017452955	ENSIPUP00000018652	852 (aa)	XP_017308444	A0A2D0PR41
ENSIPUT00000019471	-	6681	-	ENSIPUP00000018694	840 (aa)	-	-
ENSIPUT00000019529	-	2394	-	ENSIPUP00000018734	797 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000012659's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04020	Calcium signaling pathway	KEGG
ipu04270	Vascular smooth muscle contraction	KEGG
ipu04371	Apelin signaling pathway	KEGG
ipu04510	Focal adhesion	KEGG
ipu04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012659	mylk5	97	52.346	ENSAPOG00000019520	-	94	52.469	Acanthochromis_polyacanthus
ENSIPUG00000012659	mylk5	99	58.419	ENSAPOG00000023231	mylk5	99	58.419	Acanthochromis_polyacanthus
ENSIPUG00000012659	mylk5	99	52.148	ENSACIG00000024477	-	99	51.909	Amphilophus_citrinellus
ENSIPUG00000012659	mylk5	96	62.370	ENSAOCG00000014130	mylk5	97	62.630	Amphiprion_ocellaris
ENSIPUG00000012659	mylk5	97	52.099	ENSAOCG00000024465	-	94	52.163	Amphiprion_ocellaris
ENSIPUG00000012659	mylk5	98	51.637	ENSAPEG00000014652	-	93	51.527	Amphiprion_percula
ENSIPUG00000012659	mylk5	96	62.109	ENSAPEG00000017851	mylk5	97	62.109	Amphiprion_percula
ENSIPUG00000012659	mylk5	96	61.046	ENSATEG00000002426	mylk5	99	57.177	Anabas_testudineus
ENSIPUG00000012659	mylk5	99	57.920	ENSACLG00000003301	mylk5	99	59.489	Astatotilapia_calliptera
ENSIPUG00000012659	mylk5	98	52.010	ENSACLG00000007583	-	99	49.707	Astatotilapia_calliptera
ENSIPUG00000012659	mylk5	81	56.024	ENSAMXG00000019493	-	91	56.928	Astyanax_mexicanus
ENSIPUG00000012659	mylk5	82	61.619	ENSCSEG00000017281	mylk5	89	63.380	Cynoglossus_semilaevis
ENSIPUG00000012659	mylk5	99	49.070	ENSCVAG00000022136	-	99	49.070	Cyprinodon_variegatus
ENSIPUG00000012659	mylk5	99	58.002	ENSCVAG00000022813	mylk5	99	58.002	Cyprinodon_variegatus
ENSIPUG00000012659	mylk5	99	54.235	ENSFHEG00000011638	-	100	53.559	Fundulus_heteroclitus
ENSIPUG00000012659	mylk5	99	49.594	ENSFHEG00000010974	-	99	49.594	Fundulus_heteroclitus
ENSIPUG00000012659	mylk5	99	55.814	ENSGAFG00000000269	mylk5	99	55.814	Gambusia_affinis
ENSIPUG00000012659	mylk5	80	60.121	ENSGACG00000008527	mylk5	99	60.121	Gasterosteus_aculeatus
ENSIPUG00000012659	mylk5	99	57.833	ENSHBUG00000002257	mylk5	99	57.864	Haplochromis_burtoni
ENSIPUG00000012659	mylk5	98	53.090	ENSHBUG00000016459	-	99	51.124	Haplochromis_burtoni
ENSIPUG00000012659	mylk5	81	56.012	ENSHCOG00000015710	-	86	56.012	Hippocampus_comes
ENSIPUG00000012659	mylk5	98	51.157	ENSKMAG00000016742	-	99	50.000	Kryptolebias_marmoratus
ENSIPUG00000012659	mylk5	99	57.674	ENSKMAG00000019605	mylk5	99	57.643	Kryptolebias_marmoratus
ENSIPUG00000012659	mylk5	97	52.224	ENSLBEG00000004115	-	93	51.970	Labrus_bergylta
ENSIPUG00000012659	mylk5	99	58.810	ENSLBEG00000003526	mylk5	99	58.810	Labrus_bergylta
ENSIPUG00000012659	mylk5	99	57.794	ENSMAMG00000000610	mylk5	99	57.794	Mastacembelus_armatus
ENSIPUG00000012659	mylk5	99	58.000	ENSMZEG00005022663	mylk5	99	58.000	Maylandia_zebra
ENSIPUG00000012659	mylk5	96	61.429	ENSMMOG00000020584	mylk5	96	61.538	Mola_mola
ENSIPUG00000012659	mylk5	96	52.837	ENSMALG00000022416	-	87	52.971	Monopterus_albus
ENSIPUG00000012659	mylk5	99	57.710	ENSMALG00000004945	mylk5	99	57.710	Monopterus_albus
ENSIPUG00000012659	mylk5	99	51.467	ENSONIG00000016230	-	94	51.995	Oreochromis_niloticus
ENSIPUG00000012659	mylk5	54	68.623	ENSONIG00000019875	-	96	68.623	Oreochromis_niloticus
ENSIPUG00000012659	mylk5	96	59.402	ENSONIG00000001203	mylk5	96	68.623	Oreochromis_niloticus
ENSIPUG00000012659	mylk5	99	54.472	ENSPFOG00000013597	mylk5	99	54.472	Poecilia_formosa
ENSIPUG00000012659	mylk5	99	55.742	ENSPLAG00000023779	mylk5	99	55.742	Poecilia_latipinna
ENSIPUG00000012659	mylk5	99	56.265	ENSPMEG00000023897	mylk5	99	56.265	Poecilia_mexicana
ENSIPUG00000012659	mylk5	99	49.249	ENSPREG00000003222	-	99	49.249	Poecilia_reticulata
ENSIPUG00000012659	mylk5	84	61.626	ENSPREG00000009707	mylk5	96	61.626	Poecilia_reticulata
ENSIPUG00000012659	mylk5	99	57.009	ENSPNYG00000010046	mylk5	99	57.009	Pundamilia_nyererei
ENSIPUG00000012659	mylk5	99	49.639	ENSPNYG00000019509	-	88	66.343	Pundamilia_nyererei
ENSIPUG00000012659	mylk5	81	60.611	ENSSFOG00015004885	-	95	60.530	Scleropages_formosus
ENSIPUG00000012659	mylk5	98	53.028	ENSSMAG00000020328	-	94	53.769	Scophthalmus_maximus
ENSIPUG00000012659	mylk5	99	57.635	ENSSMAG00000006784	mylk5	99	57.635	Scophthalmus_maximus
ENSIPUG00000012659	mylk5	96	54.814	ENSSDUG00000020847	-	92	54.814	Seriola_dumerili
ENSIPUG00000012659	mylk5	99	52.927	ENSSLDG00000019897	-	92	54.172	Seriola_lalandi_dorsalis
ENSIPUG00000012659	mylk5	96	62.257	ENSSPAG00000020815	mylk5	96	62.257	Stegastes_partitus
ENSIPUG00000012659	mylk5	91	53.010	ENSSPAG00000019068	-	98	52.711	Stegastes_partitus
ENSIPUG00000012659	mylk5	99	55.632	ENSTRUG00000015150	mylk5	99	55.632	Takifugu_rubripes
ENSIPUG00000012659	mylk5	72	60.797	ENSTNIG00000011699	mylk5	99	61.028	Tetraodon_nigroviridis
ENSIPUG00000012659	mylk5	50	60.993	ENSTNIG00000004928	-	99	60.993	Tetraodon_nigroviridis
ENSIPUG00000012659	mylk5	96	50.196	ENSXCOG00000005927	-	89	64.621	Xiphophorus_couchianus
ENSIPUG00000012659	mylk5	99	56.330	ENSXMAG00000007789	mylk5	99	56.345	Xiphophorus_maculatus
ENSIPUG00000012659	mylk5	85	51.617	ENSXMAG00000015589	-	92	51.617	Xiphophorus_maculatus