EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000012769 (Gene tree)
Gene ID: 108279311
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7138 bases
Position: chr18:5777754-5784891
Accession: 108279311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018802	zf-C2H2	PF00096.26	2e-26	1	5
ENSIPUP00000018802	zf-C2H2	PF00096.26	2e-26	2	5
ENSIPUP00000018802	zf-C2H2	PF00096.26	2e-26	3	5
ENSIPUP00000018802	zf-C2H2	PF00096.26	2e-26	4	5
ENSIPUP00000018802	zf-C2H2	PF00096.26	2e-26	5	5
ENSIPUP00000018802	zf-met	PF12874.7	3e-09	1	2
ENSIPUP00000018802	zf-met	PF12874.7	3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019598	-	2588	XM_017493462	ENSIPUP00000018802	331 (aa)	XP_017348951	A0A2D0T2B7

Gene Model

Click here to download ENSIPUG00000012769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000012769	gfi1b	52	44.444	ENSIPUG00000005547	-	56	44.444
ENSIPUG00000012769	gfi1b	56	40.606	ENSIPUG00000021472	-	86	40.606
ENSIPUG00000012769	gfi1b	53	40.411	ENSIPUG00000001248	prdm5	73	40.373
ENSIPUG00000012769	gfi1b	51	44.915	ENSIPUG00000002655	-	98	44.068
ENSIPUG00000012769	gfi1b	51	41.667	ENSIPUG00000001941	-	82	41.667
ENSIPUG00000012769	gfi1b	62	74.038	ENSIPUG00000013414	GFI1	100	48.662
ENSIPUG00000012769	gfi1b	62	46.479	ENSIPUG00000015400	-	93	46.479
ENSIPUG00000012769	gfi1b	62	39.881	ENSIPUG00000013315	-	93	39.881
ENSIPUG00000012769	gfi1b	59	46.667	ENSIPUG00000021518	-	86	45.113
ENSIPUG00000012769	gfi1b	53	41.071	ENSIPUG00000021515	-	85	41.071
ENSIPUG00000012769	gfi1b	68	43.125	ENSIPUG00000021434	-	94	43.125
ENSIPUG00000012769	gfi1b	51	45.625	ENSIPUG00000015177	-	67	45.625
ENSIPUG00000012769	gfi1b	53	40.828	ENSIPUG00000008581	znf319b	88	40.828
ENSIPUG00000012769	gfi1b	53	39.881	ENSIPUG00000012109	ZN12	51	39.881
ENSIPUG00000012769	gfi1b	77	40.588	ENSIPUG00000021527	-	92	40.588
ENSIPUG00000012769	gfi1b	60	43.478	ENSIPUG00000013065	-	93	43.478
ENSIPUG00000012769	gfi1b	59	40.936	ENSIPUG00000021441	-	92	40.936
ENSIPUG00000012769	gfi1b	53	38.776	ENSIPUG00000002075	znf341	50	38.776
ENSIPUG00000012769	gfi1b	71	44.218	ENSIPUG00000003960	-	87	44.218
ENSIPUG00000012769	gfi1b	51	44.371	ENSIPUG00000006936	-	80	42.767
ENSIPUG00000012769	gfi1b	56	45.000	ENSIPUG00000018102	znf646	54	45.000
ENSIPUG00000012769	gfi1b	74	39.450	ENSIPUG00000011652	znf648	74	37.500
ENSIPUG00000012769	gfi1b	51	44.048	ENSIPUG00000021998	-	90	44.048
ENSIPUG00000012769	gfi1b	64	41.135	ENSIPUG00000023635	-	92	43.750
ENSIPUG00000012769	gfi1b	59	46.715	ENSIPUG00000022741	-	71	46.715
ENSIPUG00000012769	gfi1b	51	42.105	ENSIPUG00000005339	-	85	42.105
ENSIPUG00000012769	gfi1b	67	42.353	ENSIPUG00000016075	-	93	44.375
ENSIPUG00000012769	gfi1b	52	38.298	ENSIPUG00000012830	-	79	38.298
ENSIPUG00000012769	gfi1b	65	40.397	ENSIPUG00000007076	-	96	40.741
ENSIPUG00000012769	gfi1b	64	43.976	ENSIPUG00000015121	-	54	43.976
ENSIPUG00000012769	gfi1b	85	42.466	ENSIPUG00000005733	-	82	42.466
ENSIPUG00000012769	gfi1b	53	42.169	ENSIPUG00000019205	-	68	42.169
ENSIPUG00000012769	gfi1b	54	44.375	ENSIPUG00000003011	-	57	44.375
ENSIPUG00000012769	gfi1b	61	43.125	ENSIPUG00000006916	-	90	43.125
ENSIPUG00000012769	gfi1b	53	44.025	ENSIPUG00000022266	ZNF135	60	44.025
ENSIPUG00000012769	gfi1b	51	43.125	ENSIPUG00000005581	-	77	43.125
ENSIPUG00000012769	gfi1b	56	30.481	ENSIPUG00000002510	-	54	30.481
ENSIPUG00000012769	gfi1b	60	43.011	ENSIPUG00000004905	znf236	51	46.429
ENSIPUG00000012769	gfi1b	51	42.384	ENSIPUG00000004428	-	74	42.384
ENSIPUG00000012769	gfi1b	51	42.342	ENSIPUG00000015233	-	59	42.342
ENSIPUG00000012769	gfi1b	51	39.259	ENSIPUG00000003040	zbtb47a	77	39.259
ENSIPUG00000012769	gfi1b	53	39.412	ENSIPUG00000011258	-	86	39.412
ENSIPUG00000012769	gfi1b	51	41.875	ENSIPUG00000017575	-	51	41.875
ENSIPUG00000012769	gfi1b	51	40.000	ENSIPUG00000011399	zbtb47b	68	40.000
ENSIPUG00000012769	gfi1b	51	39.881	ENSIPUG00000023761	-	60	39.881
ENSIPUG00000012769	gfi1b	77	41.875	ENSIPUG00000023688	-	95	44.604
ENSIPUG00000012769	gfi1b	50	63.415	ENSIPUG00000021407	-	96	41.716
ENSIPUG00000012769	gfi1b	64	46.067	ENSIPUG00000015468	-	78	46.067
ENSIPUG00000012769	gfi1b	50	37.349	ENSIPUG00000013526	-	71	37.349
ENSIPUG00000012769	gfi1b	51	44.048	ENSIPUG00000021484	-	98	44.048
ENSIPUG00000012769	gfi1b	60	43.030	ENSIPUG00000022751	-	98	45.070
ENSIPUG00000012769	gfi1b	51	47.015	ENSIPUG00000012960	-	64	47.015
ENSIPUG00000012769	gfi1b	51	42.553	ENSIPUG00000009750	-	78	42.553
ENSIPUG00000012769	gfi1b	52	42.593	ENSIPUG00000016009	znf596	63	43.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012769	gfi1b	100	72.455	ENSAPOG00000001296	gfi1b	100	72.455	Acanthochromis_polyacanthus
ENSIPUG00000012769	gfi1b	99	65.257	ENSACIG00000002190	gfi1b	99	65.257	Amphilophus_citrinellus
ENSIPUG00000012769	gfi1b	100	72.156	ENSAOCG00000021187	gfi1b	100	72.156	Amphiprion_ocellaris
ENSIPUG00000012769	gfi1b	100	72.754	ENSAPEG00000016196	gfi1b	100	72.754	Amphiprion_percula
ENSIPUG00000012769	gfi1b	100	73.952	ENSATEG00000002534	gfi1b	100	73.952	Anabas_testudineus
ENSIPUG00000012769	gfi1b	100	62.500	ENSAPLG00000003373	GFI1B	100	62.500	Anas_platyrhynchos
ENSIPUG00000012769	gfi1b	100	69.162	ENSACLG00000027053	gfi1b	100	69.162	Astatotilapia_calliptera
ENSIPUG00000012769	gfi1b	100	80.838	ENSAMXG00000037544	GFI1B	100	80.838	Astyanax_mexicanus
ENSIPUG00000012769	gfi1b	100	59.531	ENSCAPG00000010404	GFI1B	100	59.531	Cavia_aperea
ENSIPUG00000012769	gfi1b	100	61.494	ENSCPBG00000021186	GFI1B	100	61.494	Chrysemys_picta_bellii
ENSIPUG00000012769	gfi1b	100	68.452	ENSCSEG00000001315	gfi1b	100	68.452	Cynoglossus_semilaevis
ENSIPUG00000012769	gfi1b	100	70.091	ENSCVAG00000017168	gfi1b	100	70.091	Cyprinodon_variegatus
ENSIPUG00000012769	gfi1b	100	75.731	ENSDARG00000079947	gfi1b	99	86.920	Danio_rerio
ENSIPUG00000012769	gfi1b	62	54.412	ENSEEUG00000012609	-	90	54.412	Erinaceus_europaeus
ENSIPUG00000012769	gfi1b	100	75.146	ENSELUG00000016933	gfi1b	100	75.146	Esox_lucius
ENSIPUG00000012769	gfi1b	100	55.946	ENSFALG00000001479	GFI1B	100	55.946	Ficedula_albicollis
ENSIPUG00000012769	gfi1b	100	70.882	ENSFHEG00000015138	gfi1b	100	70.882	Fundulus_heteroclitus
ENSIPUG00000012769	gfi1b	73	81.070	ENSGMOG00000019123	gfi1b	91	81.070	Gadus_morhua
ENSIPUG00000012769	gfi1b	100	61.988	ENSGALG00000003478	GFI1B	100	61.988	Gallus_gallus
ENSIPUG00000012769	gfi1b	71	85.897	ENSGAFG00000003059	gfi1b	100	85.897	Gambusia_affinis
ENSIPUG00000012769	gfi1b	100	67.606	ENSGACG00000018134	gfi1b	100	67.606	Gasterosteus_aculeatus
ENSIPUG00000012769	gfi1b	100	61.471	ENSGAGG00000021327	GFI1B	100	61.471	Gopherus_agassizii
ENSIPUG00000012769	gfi1b	100	69.162	ENSHBUG00000005451	gfi1b	100	69.162	Haplochromis_burtoni
ENSIPUG00000012769	gfi1b	100	69.345	ENSHCOG00000013713	gfi1b	100	69.345	Hippocampus_comes
ENSIPUG00000012769	gfi1b	99	55.291	ENSJJAG00000016355	Gfi1b	100	55.291	Jaculus_jaculus
ENSIPUG00000012769	gfi1b	100	70.238	ENSKMAG00000016047	gfi1b	100	70.238	Kryptolebias_marmoratus
ENSIPUG00000012769	gfi1b	100	70.833	ENSLBEG00000020297	gfi1b	99	70.958	Labrus_bergylta
ENSIPUG00000012769	gfi1b	100	61.696	ENSLACG00000012207	GFI1B	100	61.696	Latimeria_chalumnae
ENSIPUG00000012769	gfi1b	100	72.141	ENSLOCG00000005750	gfi1b	100	72.141	Lepisosteus_oculatus
ENSIPUG00000012769	gfi1b	100	60.000	ENSLAFG00000022367	GFI1B	100	60.000	Loxodonta_africana
ENSIPUG00000012769	gfi1b	100	73.653	ENSMAMG00000003040	gfi1b	100	73.653	Mastacembelus_armatus
ENSIPUG00000012769	gfi1b	99	69.369	ENSMZEG00005015594	gfi1b	99	69.369	Maylandia_zebra
ENSIPUG00000012769	gfi1b	100	61.696	ENSMGAG00000006129	GFI1B	100	61.696	Meleagris_gallopavo
ENSIPUG00000012769	gfi1b	100	71.557	ENSMMOG00000011764	gfi1b	100	71.557	Mola_mola
ENSIPUG00000012769	gfi1b	100	55.556	ENSMODG00000012600	GFI1B	100	55.556	Monodelphis_domestica
ENSIPUG00000012769	gfi1b	100	73.134	ENSMALG00000004034	gfi1b	100	73.134	Monopterus_albus
ENSIPUG00000012769	gfi1b	100	61.062	ENSNGAG00000003333	Gfi1b	100	61.834	Nannospalax_galili
ENSIPUG00000012769	gfi1b	100	69.851	ENSNBRG00000012391	gfi1b	100	69.851	Neolamprologus_brichardi
ENSIPUG00000012769	gfi1b	100	69.254	ENSONIG00000013011	gfi1b	96	86.631	Oreochromis_niloticus
ENSIPUG00000012769	gfi1b	100	62.018	ENSOANG00000014723	GFI1B	100	62.018	Ornithorhynchus_anatinus
ENSIPUG00000012769	gfi1b	100	55.193	ENSORLG00000014390	GFI1B	96	61.168	Oryzias_latipes
ENSIPUG00000012769	gfi1b	100	68.222	ENSORLG00020003719	GFI1B	100	68.222	Oryzias_latipes_hni
ENSIPUG00000012769	gfi1b	100	68.222	ENSORLG00015017142	gfi1b	100	68.222	Oryzias_latipes_hsok
ENSIPUG00000012769	gfi1b	100	66.176	ENSOMEG00000015149	GFI1B	100	66.176	Oryzias_melastigma
ENSIPUG00000012769	gfi1b	100	58.453	ENSOGAG00000008879	GFI1B	100	58.571	Otolemur_garnettii
ENSIPUG00000012769	gfi1b	100	74.107	ENSPKIG00000007643	gfi1b	100	74.107	Paramormyrops_kingsleyae
ENSIPUG00000012769	gfi1b	100	60.458	ENSPSIG00000012112	GFI1B	100	60.458	Pelodiscus_sinensis
ENSIPUG00000012769	gfi1b	99	64.583	ENSPMGG00000006021	gfi1b	99	64.583	Periophthalmus_magnuspinnatus
ENSIPUG00000012769	gfi1b	100	53.908	ENSPCIG00000019724	GFI1B	100	53.908	Phascolarctos_cinereus
ENSIPUG00000012769	gfi1b	100	69.883	ENSPFOG00000003460	gfi1b	100	69.883	Poecilia_formosa
ENSIPUG00000012769	gfi1b	100	70.796	ENSPLAG00000021960	GFI1B	100	70.796	Poecilia_latipinna
ENSIPUG00000012769	gfi1b	100	69.653	ENSPLAG00000017181	GFI1B	100	69.653	Poecilia_latipinna
ENSIPUG00000012769	gfi1b	100	71.681	ENSPMEG00000019220	gfi1b	100	71.681	Poecilia_mexicana
ENSIPUG00000012769	gfi1b	100	71.681	ENSPMEG00000001556	GFI1B	100	71.681	Poecilia_mexicana
ENSIPUG00000012769	gfi1b	100	71.386	ENSPREG00000021718	gfi1b	100	71.386	Poecilia_reticulata
ENSIPUG00000012769	gfi1b	100	68.060	ENSPNYG00000018422	gfi1b	100	68.060	Pundamilia_nyererei
ENSIPUG00000012769	gfi1b	100	80.967	ENSPNAG00000021118	gfi1b	100	80.967	Pygocentrus_nattereri
ENSIPUG00000012769	gfi1b	100	50.806	ENSSHAG00000006462	GFI1B	100	50.806	Sarcophilus_harrisii
ENSIPUG00000012769	gfi1b	83	68.085	ENSSFOG00015011566	gfi1b	90	68.085	Scleropages_formosus
ENSIPUG00000012769	gfi1b	100	70.796	ENSSMAG00000015181	gfi1b	99	71.171	Scophthalmus_maximus
ENSIPUG00000012769	gfi1b	100	72.321	ENSSDUG00000011604	gfi1b	100	72.321	Seriola_dumerili
ENSIPUG00000012769	gfi1b	100	72.321	ENSSLDG00000013823	gfi1b	100	72.321	Seriola_lalandi_dorsalis
ENSIPUG00000012769	gfi1b	100	51.429	ENSSPUG00000016039	GFI1B	100	51.429	Sphenodon_punctatus
ENSIPUG00000012769	gfi1b	100	72.156	ENSSPAG00000022914	gfi1b	100	72.156	Stegastes_partitus
ENSIPUG00000012769	gfi1b	50	94.737	ENSTGUG00000005282	-	99	94.737	Taeniopygia_guttata
ENSIPUG00000012769	gfi1b	53	58.678	ENSTGUG00000015953	-	63	58.678	Taeniopygia_guttata
ENSIPUG00000012769	gfi1b	100	70.359	ENSTRUG00000004525	gfi1b	100	70.359	Takifugu_rubripes
ENSIPUG00000012769	gfi1b	100	70.149	ENSTNIG00000003834	gfi1b	100	70.149	Tetraodon_nigroviridis
ENSIPUG00000012769	gfi1b	100	43.678	ENSTBEG00000014459	GFI1B	100	43.678	Tupaia_belangeri
ENSIPUG00000012769	gfi1b	100	58.480	ENSXETG00000006263	gfi1b	100	57.022	Xenopus_tropicalis
ENSIPUG00000012769	gfi1b	100	71.091	ENSXMAG00000027589	gfi1b	100	71.091	Xiphophorus_maculatus