EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000012830 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1301 bases
Position: chr24:19233003-19234303
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000018910	zf-C2H2	PF00096.26	7.7e-19	1	3
ENSIPUP00000018910	zf-C2H2	PF00096.26	7.7e-19	2	3
ENSIPUP00000018910	zf-C2H2	PF00096.26	7.7e-19	3	3
ENSIPUP00000018910	zf-met	PF12874.7	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000019713	-	528	-	ENSIPUP00000018910	175 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000012830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000012830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000012830	-	78	42.553	ENSIPUG00000001941	-	82	42.553
ENSIPUG00000012830	-	79	38.298	ENSIPUG00000012769	gfi1b	52	38.298
ENSIPUG00000012830	-	79	38.400	ENSIPUG00000012109	ZN12	52	38.400
ENSIPUG00000012830	-	90	51.020	ENSIPUG00000022751	-	90	51.020
ENSIPUG00000012830	-	82	53.191	ENSIPUG00000015121	-	58	41.791
ENSIPUG00000012830	-	76	34.815	ENSIPUG00000004551	scrt1a	53	34.815
ENSIPUG00000012830	-	77	40.708	ENSIPUG00000000131	snai2	53	40.708
ENSIPUG00000012830	-	78	43.421	ENSIPUG00000015203	-	68	40.146
ENSIPUG00000012830	-	80	42.857	ENSIPUG00000013315	-	93	42.857
ENSIPUG00000012830	-	84	42.143	ENSIPUG00000015468	-	88	43.066
ENSIPUG00000012830	-	79	43.165	ENSIPUG00000006916	-	77	43.165
ENSIPUG00000012830	-	85	35.714	ENSIPUG00000005547	-	51	35.714
ENSIPUG00000012830	-	81	38.028	ENSIPUG00000005733	-	67	38.028
ENSIPUG00000012830	-	89	44.776	ENSIPUG00000021515	-	87	44.776
ENSIPUG00000012830	-	79	37.615	ENSIPUG00000010239	wt1	50	37.615
ENSIPUG00000012830	-	78	40.000	ENSIPUG00000015177	-	53	40.000
ENSIPUG00000012830	-	90	44.853	ENSIPUG00000021998	-	96	44.853
ENSIPUG00000012830	-	81	44.144	ENSIPUG00000016075	-	95	43.382
ENSIPUG00000012830	-	78	43.382	ENSIPUG00000015233	-	57	43.382
ENSIPUG00000012830	-	85	39.259	ENSIPUG00000011652	znf648	61	39.259
ENSIPUG00000012830	-	87	43.373	ENSIPUG00000003960	-	86	43.373
ENSIPUG00000012830	-	77	44.086	ENSIPUG00000021484	-	97	44.086
ENSIPUG00000012830	-	80	47.191	ENSIPUG00000002655	-	98	47.191
ENSIPUG00000012830	-	87	34.058	ENSIPUG00000001248	prdm5	60	37.778
ENSIPUG00000012830	-	78	44.954	ENSIPUG00000021556	-	82	44.954
ENSIPUG00000012830	-	78	50.909	ENSIPUG00000022741	-	79	50.909
ENSIPUG00000012830	-	81	34.848	ENSIPUG00000011399	zbtb47b	74	34.848
ENSIPUG00000012830	-	77	49.020	ENSIPUG00000011073	-	97	49.020
ENSIPUG00000012830	-	95	31.098	ENSIPUG00000013526	-	69	31.098
ENSIPUG00000012830	-	77	39.655	ENSIPUG00000016009	znf596	64	38.971
ENSIPUG00000012830	-	77	42.222	ENSIPUG00000021434	-	94	42.222
ENSIPUG00000012830	-	77	40.000	ENSIPUG00000004428	-	72	40.000
ENSIPUG00000012830	-	78	35.821	ENSIPUG00000019205	-	61	35.821
ENSIPUG00000012830	-	77	47.826	ENSIPUG00000021518	-	96	45.455
ENSIPUG00000012830	-	77	41.176	ENSIPUG00000007934	-	85	41.176
ENSIPUG00000012830	-	78	43.609	ENSIPUG00000009750	-	78	43.609
ENSIPUG00000012830	-	87	43.382	ENSIPUG00000015400	-	95	43.382
ENSIPUG00000012830	-	78	42.453	ENSIPUG00000005339	-	83	42.453
ENSIPUG00000012830	-	77	42.647	ENSIPUG00000023761	-	51	42.647
ENSIPUG00000012830	-	90	44.118	ENSIPUG00000023635	-	94	43.519
ENSIPUG00000012830	-	79	64.662	ENSIPUG00000018102	znf646	50	64.662
ENSIPUG00000012830	-	86	34.074	ENSIPUG00000003040	zbtb47a	83	34.074
ENSIPUG00000012830	-	83	33.582	ENSIPUG00000008581	znf319b	88	33.582
ENSIPUG00000012830	-	78	49.383	ENSIPUG00000021472	-	73	49.383
ENSIPUG00000012830	-	77	41.912	ENSIPUG00000005581	-	69	41.912
ENSIPUG00000012830	-	79	42.647	ENSIPUG00000021527	-	96	42.647
ENSIPUG00000012830	-	81	39.706	ENSIPUG00000007076	-	91	33.108
ENSIPUG00000012830	-	80	38.971	ENSIPUG00000022266	ZNF135	62	38.971
ENSIPUG00000012830	-	78	50.877	ENSIPUG00000023688	-	96	41.667
ENSIPUG00000012830	-	85	35.780	ENSIPUG00000011258	-	75	35.780
ENSIPUG00000012830	-	78	41.481	ENSIPUG00000013065	-	93	41.481
ENSIPUG00000012830	-	83	42.063	ENSIPUG00000021441	-	92	42.063
ENSIPUG00000012830	-	80	44.531	ENSIPUG00000012960	-	93	44.531
ENSIPUG00000012830	-	79	44.330	ENSIPUG00000006936	-	80	43.262
ENSIPUG00000012830	-	78	44.118	ENSIPUG00000015601	-	50	44.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000012830	-	77	80.000	ENSACIG00000023049	znf646	97	49.112	Amphilophus_citrinellus
ENSIPUG00000012830	-	83	66.917	ENSACIG00000001025	si:dkey-89b17.4	51	66.917	Amphilophus_citrinellus
ENSIPUG00000012830	-	86	67.669	ENSAPEG00000007719	si:dkey-89b17.4	50	67.669	Amphiprion_percula
ENSIPUG00000012830	-	93	61.654	ENSATEG00000015206	znf646	57	61.654	Anabas_testudineus
ENSIPUG00000012830	-	84	62.406	ENSACLG00000012712	znf646	51	62.406	Astatotilapia_calliptera
ENSIPUG00000012830	-	86	62.406	ENSCSEG00000012389	znf646	50	62.406	Cynoglossus_semilaevis
ENSIPUG00000012830	-	81	66.917	ENSCSEG00000010769	si:dkey-89b17.4	55	66.917	Cynoglossus_semilaevis
ENSIPUG00000012830	-	83	66.917	ENSDARG00000075545	si:dkey-89b17.4	91	45.794	Danio_rerio
ENSIPUG00000012830	-	89	63.910	ENSDARG00000061424	znf646	95	51.553	Danio_rerio
ENSIPUG00000012830	-	94	63.910	ENSELUG00000010423	znf646	57	63.910	Esox_lucius
ENSIPUG00000012830	-	91	60.150	ENSFHEG00000000561	znf646	65	60.150	Fundulus_heteroclitus
ENSIPUG00000012830	-	89	57.432	ENSGMOG00000016554	znf646	65	57.432	Gadus_morhua
ENSIPUG00000012830	-	77	44.318	ENSGAFG00000016353	-	74	44.318	Gambusia_affinis
ENSIPUG00000012830	-	85	62.406	ENSGACG00000008733	znf646	58	62.406	Gasterosteus_aculeatus
ENSIPUG00000012830	-	95	67.669	ENSGACG00000014714	si:dkey-89b17.4	63	67.669	Gasterosteus_aculeatus
ENSIPUG00000012830	-	84	62.406	ENSHBUG00000004840	znf646	51	62.406	Haplochromis_burtoni
ENSIPUG00000012830	-	86	60.145	ENSHCOG00000001901	si:dkey-89b17.4	52	59.712	Hippocampus_comes
ENSIPUG00000012830	-	86	58.929	ENSHCOG00000014890	znf646	50	58.929	Hippocampus_comes
ENSIPUG00000012830	-	90	62.406	ENSLBEG00000016562	znf646	52	62.406	Labrus_bergylta
ENSIPUG00000012830	-	78	61.654	ENSMAMG00000009313	znf646	50	61.654	Mastacembelus_armatus
ENSIPUG00000012830	-	84	62.406	ENSMZEG00005011264	znf646	51	62.406	Maylandia_zebra
ENSIPUG00000012830	-	83	67.669	ENSMMOG00000012741	si:dkey-89b17.4	52	67.669	Mola_mola
ENSIPUG00000012830	-	89	58.000	ENSMMOG00000002311	znf646	53	58.000	Mola_mola
ENSIPUG00000012830	-	84	46.023	ENSMALG00000002274	-	98	44.382	Monopterus_albus
ENSIPUG00000012830	-	85	67.669	ENSMALG00000019558	si:dkey-89b17.4	53	67.669	Monopterus_albus
ENSIPUG00000012830	-	84	62.406	ENSNBRG00000022534	znf646	51	62.406	Neolamprologus_brichardi
ENSIPUG00000012830	-	86	66.917	ENSNBRG00000020314	si:dkey-89b17.4	52	66.917	Neolamprologus_brichardi
ENSIPUG00000012830	-	77	62.406	ENSONIG00000019947	-	81	62.406	Oreochromis_niloticus
ENSIPUG00000012830	-	91	66.912	ENSONIG00000009324	si:dkey-89b17.4	87	66.912	Oreochromis_niloticus
ENSIPUG00000012830	-	87	67.407	ENSORLG00000024255	si:dkey-89b17.4	53	67.407	Oryzias_latipes
ENSIPUG00000012830	-	90	61.654	ENSORLG00000007885	znf646	51	61.654	Oryzias_latipes
ENSIPUG00000012830	-	90	61.654	ENSORLG00020010285	znf646	51	61.654	Oryzias_latipes_hni
ENSIPUG00000012830	-	90	61.654	ENSORLG00015008733	znf646	52	61.654	Oryzias_latipes_hsok
ENSIPUG00000012830	-	83	61.654	ENSOMEG00000015658	znf646	52	61.654	Oryzias_melastigma
ENSIPUG00000012830	-	84	67.407	ENSOMEG00000020587	si:dkey-89b17.4	53	67.407	Oryzias_melastigma
ENSIPUG00000012830	-	83	51.807	ENSPMGG00000015931	-	56	42.735	Periophthalmus_magnuspinnatus
ENSIPUG00000012830	-	83	58.088	ENSPMGG00000004639	znf646	50	58.088	Periophthalmus_magnuspinnatus
ENSIPUG00000012830	-	77	67.669	ENSPFOG00000008241	si:dkey-89b17.4	54	67.669	Poecilia_formosa
ENSIPUG00000012830	-	85	61.654	ENSPFOG00000004826	-	90	61.654	Poecilia_formosa
ENSIPUG00000012830	-	89	61.654	ENSPLAG00000010454	-	71	61.654	Poecilia_latipinna
ENSIPUG00000012830	-	90	60.902	ENSPMEG00000018283	znf646	66	61.654	Poecilia_mexicana
ENSIPUG00000012830	-	85	40.179	ENSPREG00000017637	znf646	78	40.179	Poecilia_reticulata
ENSIPUG00000012830	-	84	62.406	ENSPNYG00000017692	znf646	51	62.406	Pundamilia_nyererei
ENSIPUG00000012830	-	85	62.406	ENSPNAG00000000750	znf646	52	62.406	Pygocentrus_nattereri
ENSIPUG00000012830	-	86	62.406	ENSSMAG00000012378	znf646	50	62.406	Scophthalmus_maximus
ENSIPUG00000012830	-	84	62.406	ENSSDUG00000002675	znf646	50	62.406	Seriola_dumerili
ENSIPUG00000012830	-	84	62.406	ENSSLDG00000018521	znf646	50	62.406	Seriola_lalandi_dorsalis
ENSIPUG00000012830	-	83	66.917	ENSTRUG00000020495	si:dkey-89b17.4	57	66.917	Takifugu_rubripes
ENSIPUG00000012830	-	83	61.151	ENSTRUG00000025597	znf646	52	61.151	Takifugu_rubripes
ENSIPUG00000012830	-	85	64.493	ENSTNIG00000001159	si:dkey-89b17.4	97	64.493	Tetraodon_nigroviridis
ENSIPUG00000012830	-	84	50.270	ENSTNIG00000000073	znf646	79	62.406	Tetraodon_nigroviridis
ENSIPUG00000012830	-	85	66.917	ENSXCOG00000001645	si:dkey-89b17.4	54	66.917	Xiphophorus_couchianus
ENSIPUG00000012830	-	83	61.654	ENSXCOG00000002714	-	91	62.406	Xiphophorus_couchianus
ENSIPUG00000012830	-	83	67.669	ENSXMAG00000024528	si:dkey-89b17.4	54	67.669	Xiphophorus_maculatus
ENSIPUG00000012830	-	83	60.902	ENSXMAG00000018743	-	91	61.654	Xiphophorus_maculatus