EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013065 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 26936 bases
Position: chr19:205621-232556
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	1	7
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	2	7
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	3	7
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	4	7
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	5	7
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	6	7
ENSIPUP00000019272	zf-C2H2	PF00096.26	3e-42	7	7
ENSIPUP00000019272	zf-met	PF12874.7	5.1e-14	1	3
ENSIPUP00000019272	zf-met	PF12874.7	5.1e-14	2	3
ENSIPUP00000019272	zf-met	PF12874.7	5.1e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020092	-	927	-	ENSIPUP00000019272	308 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000013065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013065	-	94	61.194	ENSIPUG00000021472	-	80	63.861
ENSIPUG00000013065	-	97	50.259	ENSIPUG00000016009	znf596	67	51.299
ENSIPUG00000013065	-	97	31.153	ENSIPUG00000018102	znf646	81	35.433
ENSIPUG00000013065	-	93	38.028	ENSIPUG00000000131	snai2	53	38.525
ENSIPUG00000013065	-	93	41.481	ENSIPUG00000012830	-	78	41.481
ENSIPUG00000013065	-	93	61.089	ENSIPUG00000009750	-	78	61.458
ENSIPUG00000013065	-	93	41.538	ENSIPUG00000003040	zbtb47a	78	41.538
ENSIPUG00000013065	-	93	60.638	ENSIPUG00000021515	-	85	60.638
ENSIPUG00000013065	-	95	58.303	ENSIPUG00000021518	-	89	57.651
ENSIPUG00000013065	-	93	42.955	ENSIPUG00000019205	-	75	43.206
ENSIPUG00000013065	-	95	42.029	ENSIPUG00000004905	znf236	67	42.029
ENSIPUG00000013065	-	98	61.589	ENSIPUG00000015468	-	88	64.964
ENSIPUG00000013065	-	93	42.373	ENSIPUG00000001248	prdm5	70	42.373
ENSIPUG00000013065	-	93	65.546	ENSIPUG00000005339	-	83	65.546
ENSIPUG00000013065	-	93	45.556	ENSIPUG00000011652	znf648	74	45.556
ENSIPUG00000013065	-	93	57.738	ENSIPUG00000021527	-	92	58.451
ENSIPUG00000013065	-	93	55.639	ENSIPUG00000005733	-	67	55.639
ENSIPUG00000013065	-	93	55.245	ENSIPUG00000002655	-	97	59.884
ENSIPUG00000013065	-	98	63.924	ENSIPUG00000023688	-	96	64.570
ENSIPUG00000013065	-	93	57.143	ENSIPUG00000023761	-	82	55.274
ENSIPUG00000013065	-	94	30.769	ENSIPUG00000015037	znf711	50	31.474
ENSIPUG00000013065	-	93	55.479	ENSIPUG00000021441	-	91	58.333
ENSIPUG00000013065	-	93	40.571	ENSIPUG00000019706	-	55	40.571
ENSIPUG00000013065	-	93	64.184	ENSIPUG00000015400	-	93	64.748
ENSIPUG00000013065	-	99	67.431	ENSIPUG00000005581	-	74	64.455
ENSIPUG00000013065	-	93	60.000	ENSIPUG00000015203	-	70	56.938
ENSIPUG00000013065	-	93	65.385	ENSIPUG00000012960	-	91	68.103
ENSIPUG00000013065	-	99	33.939	ENSIPUG00000002510	-	63	34.641
ENSIPUG00000013065	-	94	39.683	ENSIPUG00000011399	zbtb47b	79	40.805
ENSIPUG00000013065	-	96	56.650	ENSIPUG00000021434	-	95	58.421
ENSIPUG00000013065	-	96	30.472	ENSIPUG00000012845	si:dkey-89b17.4	52	30.472
ENSIPUG00000013065	-	93	71.951	ENSIPUG00000015294	-	66	69.388
ENSIPUG00000013065	-	93	58.937	ENSIPUG00000003960	-	90	58.937
ENSIPUG00000013065	-	93	67.188	ENSIPUG00000015601	-	50	67.188
ENSIPUG00000013065	-	93	38.509	ENSIPUG00000005379	e4f1	71	38.509
ENSIPUG00000013065	-	94	60.674	ENSIPUG00000006936	-	97	60.674
ENSIPUG00000013065	-	93	53.182	ENSIPUG00000013315	-	93	53.623
ENSIPUG00000013065	-	94	58.721	ENSIPUG00000001941	-	88	60.584
ENSIPUG00000013065	-	93	43.478	ENSIPUG00000012769	gfi1b	60	43.478
ENSIPUG00000013065	-	93	58.156	ENSIPUG00000022741	-	81	60.952
ENSIPUG00000013065	-	93	69.620	ENSIPUG00000011073	-	97	69.620
ENSIPUG00000013065	-	97	55.205	ENSIPUG00000017575	-	62	58.555
ENSIPUG00000013065	-	98	56.140	ENSIPUG00000004428	-	77	57.343
ENSIPUG00000013065	-	96	69.697	ENSIPUG00000022751	-	99	69.697
ENSIPUG00000013065	-	93	57.463	ENSIPUG00000003011	-	57	58.800
ENSIPUG00000013065	-	95	43.333	ENSIPUG00000000764	zbtb16	51	45.116
ENSIPUG00000013065	-	99	59.206	ENSIPUG00000016075	-	96	61.355
ENSIPUG00000013065	-	96	35.873	ENSIPUG00000008581	znf319b	87	37.162
ENSIPUG00000013065	-	95	34.177	ENSIPUG00000015844	snai1b	56	34.058
ENSIPUG00000013065	-	93	63.131	ENSIPUG00000021556	-	89	65.517
ENSIPUG00000013065	-	93	37.838	ENSIPUG00000024011	-	52	37.838
ENSIPUG00000013065	-	93	33.175	ENSIPUG00000013526	-	88	30.337
ENSIPUG00000013065	-	93	34.545	ENSIPUG00000024004	-	80	33.065
ENSIPUG00000013065	-	94	40.816	ENSIPUG00000007076	-	91	42.202
ENSIPUG00000013065	-	93	61.509	ENSIPUG00000015177	-	68	61.509
ENSIPUG00000013065	-	93	44.884	ENSIPUG00000022266	ZNF135	61	44.884
ENSIPUG00000013065	-	95	54.545	ENSIPUG00000006916	-	77	55.973
ENSIPUG00000013065	-	96	69.403	ENSIPUG00000021998	-	94	64.646
ENSIPUG00000013065	-	94	57.295	ENSIPUG00000015233	-	70	57.295
ENSIPUG00000013065	-	93	42.128	ENSIPUG00000012109	ZN12	51	38.721
ENSIPUG00000013065	-	95	73.023	ENSIPUG00000007934	-	97	72.350
ENSIPUG00000013065	-	93	63.682	ENSIPUG00000021484	-	98	63.682
ENSIPUG00000013065	-	94	40.000	ENSIPUG00000021407	-	56	40.000
ENSIPUG00000013065	-	94	59.043	ENSIPUG00000015121	-	56	62.573
ENSIPUG00000013065	-	95	42.000	ENSIPUG00000002075	znf341	51	30.619
ENSIPUG00000013065	-	92	36.364	ENSIPUG00000005547	-	51	36.975
ENSIPUG00000013065	-	93	69.780	ENSIPUG00000023635	-	92	69.314
ENSIPUG00000013065	-	98	32.692	ENSIPUG00000011258	-	87	37.793

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013065	-	93	56.250	ENSACIG00000011153	-	77	56.250	Amphilophus_citrinellus
ENSIPUG00000013065	-	96	52.511	ENSACIG00000019791	-	93	53.883	Amphilophus_citrinellus
ENSIPUG00000013065	-	94	49.362	ENSANAG00000032414	-	81	49.153	Aotus_nancymaae
ENSIPUG00000013065	-	93	51.271	ENSACLG00000020474	-	84	49.597	Astatotilapia_calliptera
ENSIPUG00000013065	-	95	52.475	ENSACLG00000001507	-	79	52.475	Astatotilapia_calliptera
ENSIPUG00000013065	-	93	47.312	ENSACLG00000022499	-	81	47.312	Astatotilapia_calliptera
ENSIPUG00000013065	-	95	47.482	ENSACLG00000017329	-	81	47.917	Astatotilapia_calliptera
ENSIPUG00000013065	-	93	44.130	ENSACLG00000014167	-	64	44.610	Astatotilapia_calliptera
ENSIPUG00000013065	-	93	61.324	ENSAMXG00000038324	-	80	61.887	Astyanax_mexicanus
ENSIPUG00000013065	-	93	61.429	ENSAMXG00000031646	-	94	60.909	Astyanax_mexicanus
ENSIPUG00000013065	-	96	59.556	ENSAMXG00000031844	-	93	59.556	Astyanax_mexicanus
ENSIPUG00000013065	-	93	67.029	ENSAMXG00000039162	-	95	67.442	Astyanax_mexicanus
ENSIPUG00000013065	-	94	58.182	ENSAMXG00000036849	-	81	58.993	Astyanax_mexicanus
ENSIPUG00000013065	-	93	65.398	ENSAMXG00000031501	-	89	66.279	Astyanax_mexicanus
ENSIPUG00000013065	-	98	56.146	ENSAMXG00000039770	-	90	57.292	Astyanax_mexicanus
ENSIPUG00000013065	-	95	60.403	ENSAMXG00000010078	-	87	63.971	Astyanax_mexicanus
ENSIPUG00000013065	-	95	48.173	ENSCHIG00000015741	-	86	48.611	Capra_hircus
ENSIPUG00000013065	-	95	54.327	ENSCCAG00000035188	-	86	55.612	Cebus_capucinus
ENSIPUG00000013065	-	92	53.409	ENSCPBG00000001258	-	95	53.409	Chrysemys_picta_bellii
ENSIPUG00000013065	-	93	54.980	ENSDNOG00000048084	-	99	54.980	Dasypus_novemcinctus
ENSIPUG00000013065	-	93	45.635	ENSETEG00000002865	-	81	46.414	Echinops_telfairi
ENSIPUG00000013065	-	93	51.943	ENSEBUG00000011479	-	68	51.943	Eptatretus_burgeri
ENSIPUG00000013065	-	93	50.446	ENSEBUG00000008157	-	99	51.389	Eptatretus_burgeri
ENSIPUG00000013065	-	93	52.590	ENSEBUG00000012748	-	68	52.590	Eptatretus_burgeri
ENSIPUG00000013065	-	95	40.264	ENSEBUG00000011582	-	72	43.979	Eptatretus_burgeri
ENSIPUG00000013065	-	93	47.253	ENSECAG00000035557	-	76	51.942	Equus_caballus
ENSIPUG00000013065	-	93	42.500	ENSFHEG00000016184	-	74	42.623	Fundulus_heteroclitus
ENSIPUG00000013065	-	94	38.507	ENSGMOG00000004315	-	89	41.077	Gadus_morhua
ENSIPUG00000013065	-	94	43.191	ENSGACG00000019863	-	98	42.657	Gasterosteus_aculeatus
ENSIPUG00000013065	-	93	54.491	ENSGAGG00000007230	-	76	54.762	Gopherus_agassizii
ENSIPUG00000013065	-	93	53.986	ENSGAGG00000013851	-	70	53.986	Gopherus_agassizii
ENSIPUG00000013065	-	92	53.763	ENSHBUG00000021028	-	98	47.458	Haplochromis_burtoni
ENSIPUG00000013065	-	98	44.545	ENSHBUG00000006238	-	92	44.545	Haplochromis_burtoni
ENSIPUG00000013065	-	98	49.065	ENSHBUG00000019800	-	93	50.495	Haplochromis_burtoni
ENSIPUG00000013065	-	94	53.333	ENSHBUG00000017372	-	88	53.125	Haplochromis_burtoni
ENSIPUG00000013065	-	93	50.213	ENSHBUG00000000146	-	78	50.213	Haplochromis_burtoni
ENSIPUG00000013065	-	98	44.086	ENSHBUG00000013264	-	87	44.867	Haplochromis_burtoni
ENSIPUG00000013065	-	95	52.143	ENSHGLG00000018394	-	90	52.143	Heterocephalus_glaber_female
ENSIPUG00000013065	-	99	50.993	ENSSTOG00000034297	-	66	53.927	Ictidomys_tridecemlineatus
ENSIPUG00000013065	-	93	55.024	ENSMFAG00000046052	-	86	57.143	Macaca_fascicularis
ENSIPUG00000013065	-	93	55.024	ENSMNEG00000041636	-	86	57.143	Macaca_nemestrina
ENSIPUG00000013065	-	93	55.024	ENSMLEG00000032640	-	86	57.143	Mandrillus_leucophaeus
ENSIPUG00000013065	-	94	48.913	ENSMAMG00000009051	-	88	48.913	Mastacembelus_armatus
ENSIPUG00000013065	-	98	47.826	ENSMZEG00005020736	-	96	47.826	Maylandia_zebra
ENSIPUG00000013065	-	94	46.320	ENSMZEG00005019982	-	95	42.484	Maylandia_zebra
ENSIPUG00000013065	-	94	48.795	ENSMZEG00005012737	-	80	48.958	Maylandia_zebra
ENSIPUG00000013065	-	95	50.403	ENSMZEG00005021421	-	94	50.403	Maylandia_zebra
ENSIPUG00000013065	-	93	45.596	ENSMZEG00005027950	-	89	44.599	Maylandia_zebra
ENSIPUG00000013065	-	93	46.078	ENSMZEG00005027285	-	82	48.473	Maylandia_zebra
ENSIPUG00000013065	-	93	54.582	ENSMALG00000004413	-	94	55.901	Monopterus_albus
ENSIPUG00000013065	-	93	56.364	ENSNBRG00000015873	-	94	53.465	Neolamprologus_brichardi
ENSIPUG00000013065	-	94	48.370	ENSNBRG00000015652	-	92	44.528	Neolamprologus_brichardi
ENSIPUG00000013065	-	94	54.037	ENSNBRG00000013604	-	77	55.921	Neolamprologus_brichardi
ENSIPUG00000013065	-	99	44.013	ENSNBRG00000016582	-	86	44.257	Neolamprologus_brichardi
ENSIPUG00000013065	-	95	48.438	ENSNBRG00000016603	-	87	48.571	Neolamprologus_brichardi
ENSIPUG00000013065	-	94	40.551	ENSONIG00000007931	-	84	40.580	Oreochromis_niloticus
ENSIPUG00000013065	-	95	48.026	ENSONIG00000015166	-	100	48.958	Oreochromis_niloticus
ENSIPUG00000013065	-	93	39.344	ENSONIG00000001834	-	99	43.320	Oreochromis_niloticus
ENSIPUG00000013065	-	93	44.000	ENSONIG00000000122	-	100	44.444	Oreochromis_niloticus
ENSIPUG00000013065	-	94	46.277	ENSONIG00000000093	-	99	42.599	Oreochromis_niloticus
ENSIPUG00000013065	-	93	50.526	ENSONIG00000020516	-	99	49.000	Oreochromis_niloticus
ENSIPUG00000013065	-	95	53.202	ENSONIG00000021124	-	100	53.202	Oreochromis_niloticus
ENSIPUG00000013065	-	95	40.138	ENSONIG00000008953	-	93	40.138	Oreochromis_niloticus
ENSIPUG00000013065	-	99	46.957	ENSORLG00015012951	-	86	45.139	Oryzias_latipes_hsok
ENSIPUG00000013065	-	93	52.318	ENSOGAG00000025289	-	85	53.358	Otolemur_garnettii
ENSIPUG00000013065	-	93	55.024	ENSPANG00000030978	-	91	57.143	Papio_anubis
ENSIPUG00000013065	-	93	47.183	ENSPEMG00000016975	Zfp940	74	48.659	Peromyscus_maniculatus_bairdii
ENSIPUG00000013065	-	96	47.987	ENSPMEG00000004595	-	95	47.902	Poecilia_mexicana
ENSIPUG00000013065	-	95	59.677	ENSPPYG00000009906	-	68	62.428	Pongo_abelii
ENSIPUG00000013065	-	99	46.207	ENSPNYG00000024244	-	85	46.341	Pundamilia_nyererei
ENSIPUG00000013065	-	93	60.944	ENSPNAG00000011625	-	83	61.836	Pygocentrus_nattereri
ENSIPUG00000013065	-	94	63.559	ENSPNAG00000019338	-	94	62.934	Pygocentrus_nattereri
ENSIPUG00000013065	-	93	55.024	ENSSBOG00000029728	-	86	57.143	Saimiri_boliviensis_boliviensis
ENSIPUG00000013065	-	93	51.171	ENSSPUG00000010059	-	82	52.431	Sphenodon_punctatus