EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013076 (Gene tree)
Gene ID: 108272663
Gene Symbol: SFPQ
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 22095 bases
Position: chr12:18380301-18402395
Accession: 108272663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019308	RRM_1	PF00076.22	2.3e-29	1	2
ENSIPUP00000019308	RRM_1	PF00076.22	2.3e-29	2	2
ENSIPUP00000019363	RRM_1	PF00076.22	2.5e-29	1	2
ENSIPUP00000019363	RRM_1	PF00076.22	2.5e-29	2	2
ENSIPUP00000019321	RRM_1	PF00076.22	2.6e-29	1	2
ENSIPUP00000019321	RRM_1	PF00076.22	2.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020192	-	1743	-	ENSIPUP00000019363	580 (aa)	-	-
ENSIPUT00000020146	-	5365	XM_017481229	ENSIPUP00000019321	586 (aa)	XP_017336718	W5UL94
ENSIPUT00000020132	-	1668	-	ENSIPUP00000019308	555 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000013076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013076	SFPQ	67	58.824	ENSIPUG00000018271	nono	90	57.524
ENSIPUG00000013076	SFPQ	71	63.568	ENSIPUG00000013192	pspc1	87	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013076	SFPQ	73	72.769	ENSG00000116560	SFPQ	83	74.332	Homo_sapiens
ENSIPUG00000013076	SFPQ	97	80.430	ENSAPOG00000024257	sfpq	61	80.430	Acanthochromis_polyacanthus
ENSIPUG00000013076	SFPQ	73	72.769	ENSAMEG00000000815	SFPQ	99	71.167	Ailuropoda_melanoleuca
ENSIPUG00000013076	SFPQ	96	65.785	ENSACIG00000000905	sfpq	78	74.348	Amphilophus_citrinellus
ENSIPUG00000013076	SFPQ	72	79.475	ENSAOCG00000002889	sfpq	62	76.591	Amphiprion_ocellaris
ENSIPUG00000013076	SFPQ	72	79.475	ENSAPEG00000016556	sfpq	62	76.591	Amphiprion_percula
ENSIPUG00000013076	SFPQ	79	75.472	ENSATEG00000002981	sfpq	75	75.472	Anabas_testudineus
ENSIPUG00000013076	SFPQ	68	65.281	ENSANAG00000027438	-	64	63.452	Aotus_nancymaae
ENSIPUG00000013076	SFPQ	56	55.588	ENSANAG00000037798	-	96	54.706	Aotus_nancymaae
ENSIPUG00000013076	SFPQ	58	51.831	ENSANAG00000021268	-	100	49.435	Aotus_nancymaae
ENSIPUG00000013076	SFPQ	76	75.506	ENSACLG00000022332	sfpq	63	77.494	Astatotilapia_calliptera
ENSIPUG00000013076	SFPQ	81	84.486	ENSAMXG00000011538	sfpq	94	70.665	Astyanax_mexicanus
ENSIPUG00000013076	SFPQ	73	72.769	ENSBTAG00000016328	SFPQ	63	70.000	Bos_taurus
ENSIPUG00000013076	SFPQ	73	72.769	ENSCJAG00000001431	SFPQ	61	71.330	Callithrix_jacchus
ENSIPUG00000013076	SFPQ	73	69.388	ENSCAFG00000018271	-	67	67.421	Canis_familiaris
ENSIPUG00000013076	SFPQ	73	72.769	ENSCAFG00000003595	-	70	67.804	Canis_familiaris
ENSIPUG00000013076	SFPQ	69	71.429	ENSCAFG00000017608	-	63	69.159	Canis_familiaris
ENSIPUG00000013076	SFPQ	73	69.388	ENSCAFG00020004881	-	70	64.968	Canis_lupus_dingo
ENSIPUG00000013076	SFPQ	58	67.246	ENSCAFG00020010702	-	100	66.667	Canis_lupus_dingo
ENSIPUG00000013076	SFPQ	73	72.769	ENSCHIG00000023097	SFPQ	63	70.000	Capra_hircus
ENSIPUG00000013076	SFPQ	50	80.866	ENSTSYG00000037120	-	100	70.170	Carlito_syrichta
ENSIPUG00000013076	SFPQ	58	60.920	ENSTSYG00000035106	-	98	57.184	Carlito_syrichta
ENSIPUG00000013076	SFPQ	58	63.533	ENSCPOG00000015018	-	100	60.822	Cavia_porcellus
ENSIPUG00000013076	SFPQ	73	72.769	ENSCCAG00000029361	-	62	71.330	Cebus_capucinus
ENSIPUG00000013076	SFPQ	65	76.796	ENSCATG00000036179	-	57	69.873	Cercocebus_atys
ENSIPUG00000013076	SFPQ	73	49.436	ENSCATG00000032664	-	60	48.165	Cercocebus_atys
ENSIPUG00000013076	SFPQ	50	80.866	ENSCLAG00000009583	-	100	70.170	Chinchilla_lanigera
ENSIPUG00000013076	SFPQ	73	72.769	ENSCSAG00000001082	SFPQ	63	70.000	Chlorocebus_sabaeus
ENSIPUG00000013076	SFPQ	55	81.373	ENSCHOG00000009131	SFPQ	100	70.866	Choloepus_hoffmanni
ENSIPUG00000013076	SFPQ	74	70.156	ENSCPBG00000018674	SFPQ	72	67.241	Chrysemys_picta_bellii
ENSIPUG00000013076	SFPQ	50	80.866	ENSCANG00000028087	-	100	70.170	Colobus_angolensis_palliatus
ENSIPUG00000013076	SFPQ	73	72.540	ENSCGRG00001011698	Sfpq	66	67.591	Cricetulus_griseus_chok1gshd
ENSIPUG00000013076	SFPQ	64	80.282	ENSCGRG00000010128	Sfpq	95	71.462	Cricetulus_griseus_crigri
ENSIPUG00000013076	SFPQ	99	60.991	ENSCSEG00000007852	sfpq	74	72.727	Cynoglossus_semilaevis
ENSIPUG00000013076	SFPQ	99	56.465	ENSCVAG00000019538	sfpq	71	66.739	Cyprinodon_variegatus
ENSIPUG00000013076	SFPQ	100	69.984	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSIPUG00000013076	SFPQ	73	72.769	ENSDNOG00000049454	SFPQ	64	69.469	Dasypus_novemcinctus
ENSIPUG00000013076	SFPQ	73	72.769	ENSDORG00000008109	Sfpq	64	70.000	Dipodomys_ordii
ENSIPUG00000013076	SFPQ	72	67.053	ENSETEG00000001095	SFPQ	61	61.758	Echinops_telfairi
ENSIPUG00000013076	SFPQ	73	72.769	ENSEASG00005012012	SFPQ	63	70.000	Equus_asinus_asinus
ENSIPUG00000013076	SFPQ	73	72.769	ENSECAG00000000642	SFPQ	63	70.000	Equus_caballus
ENSIPUG00000013076	SFPQ	81	75.417	ENSELUG00000023145	sfpq	76	75.410	Esox_lucius
ENSIPUG00000013076	SFPQ	73	72.769	ENSFCAG00000042862	SFPQ	64	70.000	Felis_catus
ENSIPUG00000013076	SFPQ	58	70.739	ENSFALG00000000731	SFPQ	100	68.750	Ficedula_albicollis
ENSIPUG00000013076	SFPQ	58	62.890	ENSFDAG00000017723	-	100	63.739	Fukomys_damarensis
ENSIPUG00000013076	SFPQ	77	68.722	ENSFHEG00000015200	sfpq	60	68.943	Fundulus_heteroclitus
ENSIPUG00000013076	SFPQ	96	63.089	ENSGMOG00000011957	sfpq	66	79.907	Gadus_morhua
ENSIPUG00000013076	SFPQ	100	68.896	ENSGMOG00000011950	SFPQ	75	82.311	Gadus_morhua
ENSIPUG00000013076	SFPQ	73	71.461	ENSGALG00000002514	SFPQ	68	69.144	Gallus_gallus
ENSIPUG00000013076	SFPQ	95	60.217	ENSGAFG00000014571	sfpq	76	67.873	Gambusia_affinis
ENSIPUG00000013076	SFPQ	96	65.662	ENSGACG00000002034	sfpq	76	75.693	Gasterosteus_aculeatus
ENSIPUG00000013076	SFPQ	73	72.998	ENSGGOG00000026354	SFPQ	100	70.170	Gorilla_gorilla
ENSIPUG00000013076	SFPQ	76	75.506	ENSHBUG00000016818	sfpq	63	77.494	Haplochromis_burtoni
ENSIPUG00000013076	SFPQ	73	72.273	ENSHGLG00000012001	SFPQ	65	69.536	Heterocephalus_glaber_female
ENSIPUG00000013076	SFPQ	50	80.866	ENSHGLG00100004136	-	100	70.170	Heterocephalus_glaber_male
ENSIPUG00000013076	SFPQ	96	61.023	ENSHCOG00000008612	sfpq	81	67.227	Hippocampus_comes
ENSIPUG00000013076	SFPQ	50	80.866	ENSSTOG00000014004	-	100	70.170	Ictidomys_tridecemlineatus
ENSIPUG00000013076	SFPQ	73	72.769	ENSJJAG00000015633	Sfpq	63	70.000	Jaculus_jaculus
ENSIPUG00000013076	SFPQ	93	65.000	ENSKMAG00000000238	sfpq	56	74.434	Kryptolebias_marmoratus
ENSIPUG00000013076	SFPQ	74	75.688	ENSLBEG00000003163	sfpq	58	78.673	Labrus_bergylta
ENSIPUG00000013076	SFPQ	75	71.556	ENSLACG00000014728	SFPQ	73	71.556	Latimeria_chalumnae
ENSIPUG00000013076	SFPQ	91	70.463	ENSLOCG00000001067	sfpq	100	67.938	Lepisosteus_oculatus
ENSIPUG00000013076	SFPQ	73	72.769	ENSLAFG00000015951	SFPQ	71	70.000	Loxodonta_africana
ENSIPUG00000013076	SFPQ	73	72.769	ENSMFAG00000000797	SFPQ	63	70.000	Macaca_fascicularis
ENSIPUG00000013076	SFPQ	73	72.769	ENSMMUG00000019154	SFPQ	63	70.000	Macaca_mulatta
ENSIPUG00000013076	SFPQ	73	72.769	ENSMNEG00000038895	SFPQ	63	70.000	Macaca_nemestrina
ENSIPUG00000013076	SFPQ	54	64.832	ENSMLEG00000035352	-	99	62.997	Mandrillus_leucophaeus
ENSIPUG00000013076	SFPQ	50	77.617	ENSMLEG00000010643	-	100	67.614	Mandrillus_leucophaeus
ENSIPUG00000013076	SFPQ	96	66.612	ENSMAMG00000007875	sfpq	94	63.972	Mastacembelus_armatus
ENSIPUG00000013076	SFPQ	99	59.043	ENSMZEG00005026091	sfpq	64	77.494	Maylandia_zebra
ENSIPUG00000013076	SFPQ	63	70.408	ENSMGAG00000004237	SFPQ	100	68.367	Meleagris_gallopavo
ENSIPUG00000013076	SFPQ	73	72.311	ENSMAUG00000006402	Sfpq	66	67.377	Mesocricetus_auratus
ENSIPUG00000013076	SFPQ	73	72.769	ENSMICG00000027265	SFPQ	64	70.000	Microcebus_murinus
ENSIPUG00000013076	SFPQ	73	69.794	ENSMOCG00000019075	Sfpq	96	65.032	Microtus_ochrogaster
ENSIPUG00000013076	SFPQ	99	63.693	ENSMMOG00000001074	sfpq	65	80.191	Mola_mola
ENSIPUG00000013076	SFPQ	74	71.910	ENSMODG00000017937	SFPQ	69	68.657	Monodelphis_domestica
ENSIPUG00000013076	SFPQ	96	63.861	ENSMALG00000010381	sfpq	65	80.585	Monopterus_albus
ENSIPUG00000013076	SFPQ	73	72.540	MGP_CAROLIEiJ_G0026487	Sfpq	64	69.248	Mus_caroli
ENSIPUG00000013076	SFPQ	73	72.540	ENSMUSG00000028820	Sfpq	65	69.248	Mus_musculus
ENSIPUG00000013076	SFPQ	73	72.540	MGP_PahariEiJ_G0028818	Sfpq	65	69.248	Mus_pahari
ENSIPUG00000013076	SFPQ	73	72.540	MGP_SPRETEiJ_G0027466	Sfpq	65	69.248	Mus_spretus
ENSIPUG00000013076	SFPQ	50	80.505	ENSMPUG00000014931	-	95	72.848	Mustela_putorius_furo
ENSIPUG00000013076	SFPQ	75	71.715	ENSMLUG00000027090	SFPQ	99	70.156	Myotis_lucifugus
ENSIPUG00000013076	SFPQ	73	72.540	ENSNGAG00000000888	Sfpq	62	71.101	Nannospalax_galili
ENSIPUG00000013076	SFPQ	87	65.116	ENSNBRG00000017479	sfpq	64	77.494	Neolamprologus_brichardi
ENSIPUG00000013076	SFPQ	50	80.866	ENSNLEG00000035521	-	100	70.170	Nomascus_leucogenys
ENSIPUG00000013076	SFPQ	73	73.333	ENSMEUG00000014082	SFPQ	62	71.724	Notamacropus_eugenii
ENSIPUG00000013076	SFPQ	77	69.913	ENSOPRG00000013696	SFPQ	64	69.690	Ochotona_princeps
ENSIPUG00000013076	SFPQ	74	76.566	ENSONIG00000017737	sfpq	64	77.030	Oreochromis_niloticus
ENSIPUG00000013076	SFPQ	58	72.650	ENSOANG00000008789	-	100	71.225	Ornithorhynchus_anatinus
ENSIPUG00000013076	SFPQ	73	72.336	ENSOCUG00000001877	SFPQ	94	67.152	Oryctolagus_cuniculus
ENSIPUG00000013076	SFPQ	83	69.121	ENSORLG00000007459	sfpq	58	73.239	Oryzias_latipes
ENSIPUG00000013076	SFPQ	78	71.957	ENSORLG00020011818	sfpq	61	69.565	Oryzias_latipes_hni
ENSIPUG00000013076	SFPQ	83	69.654	ENSORLG00015002131	sfpq	61	70.065	Oryzias_latipes_hsok
ENSIPUG00000013076	SFPQ	97	76.336	ENSOMEG00000018020	sfpq	58	72.454	Oryzias_melastigma
ENSIPUG00000013076	SFPQ	73	72.998	ENSOGAG00000027710	SFPQ	85	70.222	Otolemur_garnettii
ENSIPUG00000013076	SFPQ	72	73.210	ENSOARG00000019439	SFPQ	66	71.594	Ovis_aries
ENSIPUG00000013076	SFPQ	73	72.769	ENSPPAG00000030078	SFPQ	63	70.000	Pan_paniscus
ENSIPUG00000013076	SFPQ	50	80.866	ENSPPRG00000015478	-	100	69.972	Panthera_pardus
ENSIPUG00000013076	SFPQ	50	80.866	ENSPTIG00000007710	-	100	70.170	Panthera_tigris_altaica
ENSIPUG00000013076	SFPQ	73	66.819	ENSPTRG00000000518	SFPQ	62	64.222	Pan_troglodytes
ENSIPUG00000013076	SFPQ	73	72.769	ENSPANG00000005380	SFPQ	67	70.000	Papio_anubis
ENSIPUG00000013076	SFPQ	95	70.660	ENSPKIG00000023035	sfpq	100	70.833	Paramormyrops_kingsleyae
ENSIPUG00000013076	SFPQ	72	73.550	ENSPSIG00000011494	SFPQ	99	71.462	Pelodiscus_sinensis
ENSIPUG00000013076	SFPQ	72	71.564	ENSPMGG00000023883	sfpq	78	67.097	Periophthalmus_magnuspinnatus
ENSIPUG00000013076	SFPQ	73	72.540	ENSPEMG00000009794	Sfpq	97	67.447	Peromyscus_maniculatus_bairdii
ENSIPUG00000013076	SFPQ	58	72.981	ENSPMAG00000005583	sfpq	80	65.707	Petromyzon_marinus
ENSIPUG00000013076	SFPQ	73	73.165	ENSPCIG00000000923	SFPQ	67	68.870	Phascolarctos_cinereus
ENSIPUG00000013076	SFPQ	96	63.112	ENSPFOG00000003127	sfpq	90	61.682	Poecilia_formosa
ENSIPUG00000013076	SFPQ	86	64.271	ENSPREG00000008060	sfpq	65	69.762	Poecilia_reticulata
ENSIPUG00000013076	SFPQ	73	72.769	ENSPPYG00000001560	SFPQ	63	70.000	Pongo_abelii
ENSIPUG00000013076	SFPQ	71	73.023	ENSPCAG00000006164	SFPQ	60	71.395	Procavia_capensis
ENSIPUG00000013076	SFPQ	73	72.769	ENSPCOG00000027127	SFPQ	63	70.000	Propithecus_coquereli
ENSIPUG00000013076	SFPQ	73	71.954	ENSPVAG00000001865	SFPQ	64	68.151	Pteropus_vampyrus
ENSIPUG00000013076	SFPQ	74	77.030	ENSPNYG00000007494	sfpq	62	77.494	Pundamilia_nyererei
ENSIPUG00000013076	SFPQ	100	77.922	ENSPNAG00000002128	sfpq	100	77.273	Pygocentrus_nattereri
ENSIPUG00000013076	SFPQ	73	72.540	ENSRNOG00000058461	Sfpq	63	71.101	Rattus_norvegicus
ENSIPUG00000013076	SFPQ	70	67.925	ENSRBIG00000035286	SFPQ	100	70.170	Rhinopithecus_bieti
ENSIPUG00000013076	SFPQ	73	72.769	ENSRROG00000040992	SFPQ	100	70.170	Rhinopithecus_roxellana
ENSIPUG00000013076	SFPQ	55	53.614	ENSSBOG00000033925	-	96	52.108	Saimiri_boliviensis_boliviensis
ENSIPUG00000013076	SFPQ	50	80.866	ENSSBOG00000024972	-	100	70.170	Saimiri_boliviensis_boliviensis
ENSIPUG00000013076	SFPQ	58	70.571	ENSSHAG00000012312	-	100	68.000	Sarcophilus_harrisii
ENSIPUG00000013076	SFPQ	68	75.844	ENSSHAG00000016107	-	96	68.750	Sarcophilus_harrisii
ENSIPUG00000013076	SFPQ	100	69.167	ENSSFOG00015009289	sfpq	100	68.167	Scleropages_formosus
ENSIPUG00000013076	SFPQ	96	62.829	ENSSMAG00000018201	sfpq	73	72.766	Scophthalmus_maximus
ENSIPUG00000013076	SFPQ	79	75.914	ENSSDUG00000008402	sfpq	66	80.841	Seriola_dumerili
ENSIPUG00000013076	SFPQ	79	75.914	ENSSLDG00000018917	sfpq	67	78.733	Seriola_lalandi_dorsalis
ENSIPUG00000013076	SFPQ	53	81.293	ENSSARG00000006409	SFPQ	100	71.003	Sorex_araneus
ENSIPUG00000013076	SFPQ	72	80.668	ENSSPAG00000016550	sfpq	69	74.732	Stegastes_partitus
ENSIPUG00000013076	SFPQ	73	72.769	ENSSSCG00000035690	SFPQ	64	70.000	Sus_scrofa
ENSIPUG00000013076	SFPQ	72	72.158	ENSTGUG00000001722	SFPQ	99	70.534	Taeniopygia_guttata
ENSIPUG00000013076	SFPQ	74	79.499	ENSTRUG00000003783	sfpq	65	79.499	Takifugu_rubripes
ENSIPUG00000013076	SFPQ	72	81.710	ENSTNIG00000011331	sfpq	71	81.710	Tetraodon_nigroviridis
ENSIPUG00000013076	SFPQ	73	70.709	ENSTTRG00000013930	SFPQ	64	68.151	Tursiops_truncatus
ENSIPUG00000013076	SFPQ	50	77.978	ENSUMAG00000008056	-	100	67.898	Ursus_maritimus
ENSIPUG00000013076	SFPQ	53	81.633	ENSVPAG00000006960	-	56	69.067	Vicugna_pacos
ENSIPUG00000013076	SFPQ	58	67.241	ENSVVUG00000000874	-	100	65.130	Vulpes_vulpes
ENSIPUG00000013076	SFPQ	74	69.524	ENSXETG00000009682	sfpq	97	77.841	Xenopus_tropicalis
ENSIPUG00000013076	SFPQ	86	64.384	ENSXMAG00000016391	sfpq	64	70.439	Xiphophorus_maculatus