EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013083 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 223518 bases
Position: chr19:284170-507687
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019296	zf-C2H2	PF00096.26	2e-14	1	3
ENSIPUP00000019296	zf-C2H2	PF00096.26	2e-14	2	3
ENSIPUP00000019296	zf-C2H2	PF00096.26	2e-14	3	3
ENSIPUP00000019296	zf-met	PF12874.7	1.1e-10	1	2
ENSIPUP00000019296	zf-met	PF12874.7	1.1e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020117	-	909	-	ENSIPUP00000019296	302 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000013083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013083	-	51	51.695	ENSIPUG00000002655	-	97	51.695
ENSIPUG00000013083	-	70	52.586	ENSIPUG00000015468	-	97	52.586
ENSIPUG00000013083	-	51	60.606	ENSIPUG00000009750	-	78	60.606
ENSIPUG00000013083	-	65	61.739	ENSIPUG00000022751	-	91	66.667
ENSIPUG00000013083	-	59	66.129	ENSIPUG00000015177	-	81	66.129
ENSIPUG00000013083	-	50	50.000	ENSIPUG00000003960	-	76	50.000
ENSIPUG00000013083	-	51	53.271	ENSIPUG00000017575	-	51	53.271
ENSIPUG00000013083	-	50	69.863	ENSIPUG00000016075	-	93	69.863
ENSIPUG00000013083	-	51	53.448	ENSIPUG00000006916	-	84	53.448
ENSIPUG00000013083	-	68	63.077	ENSIPUG00000021515	-	98	63.077
ENSIPUG00000013083	-	66	55.385	ENSIPUG00000023635	-	96	60.976
ENSIPUG00000013083	-	51	58.120	ENSIPUG00000005733	-	67	58.120
ENSIPUG00000013083	-	60	53.448	ENSIPUG00000015203	-	94	53.448
ENSIPUG00000013083	-	52	55.319	ENSIPUG00000001941	-	83	55.319
ENSIPUG00000013083	-	59	57.265	ENSIPUG00000004428	-	86	57.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013083	-	53	41.096	ENSACIG00000017892	-	78	41.096	Amphilophus_citrinellus
ENSIPUG00000013083	-	50	44.000	ENSATEG00000018931	-	85	41.739	Anabas_testudineus
ENSIPUG00000013083	-	64	36.134	ENSACLG00000005694	-	58	36.134	Astatotilapia_calliptera
ENSIPUG00000013083	-	62	43.103	ENSCSEG00000008528	-	62	43.103	Cynoglossus_semilaevis
ENSIPUG00000013083	-	50	40.385	ENSCVAG00000003250	-	63	40.385	Cyprinodon_variegatus
ENSIPUG00000013083	-	50	42.241	ENSLBEG00000001132	-	56	42.241	Labrus_bergylta
ENSIPUG00000013083	-	53	44.348	ENSMAMG00000017939	-	67	44.348	Mastacembelus_armatus
ENSIPUG00000013083	-	57	38.144	ENSORLG00000002268	-	81	38.144	Oryzias_latipes
ENSIPUG00000013083	-	51	41.667	ENSPMGG00000002455	-	85	50.000	Periophthalmus_magnuspinnatus
ENSIPUG00000013083	-	51	31.532	ENSPMAG00000004189	-	58	35.780	Petromyzon_marinus
ENSIPUG00000013083	-	63	38.261	ENSPFOG00000018860	-	99	38.261	Poecilia_formosa
ENSIPUG00000013083	-	58	30.601	ENSPMEG00000024117	-	52	44.348	Poecilia_mexicana