EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013084 (Gene tree)
Gene ID: 108268583
Gene Symbol: prpf19
Alias: fb18f09|prp19|wu:fb18f09|zgc:56158
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6516 bases
Position: chr8:1731706-1738221
Accession: 108268583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019356	Prp19	PF08606.11	3.8e-33	1	1
ENSIPUP00000019388	Prp19	PF08606.11	3.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020184	-	3278	XM_017473619	ENSIPUP00000019356	505 (aa)	XP_017329108	A0A2D0RF05
ENSIPUT00000020222	-	1524	-	ENSIPUP00000019388	507 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000013084's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG
ipu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013084	prpf19	54	31.731	ENSIPUG00000003568	TBL3	51	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013084	prpf19	100	85.743	ENSG00000110107	PRPF19	100	88.571	Homo_sapiens
ENSIPUG00000013084	prpf19	100	95.446	ENSAPOG00000017823	prpf19	100	95.446	Acanthochromis_polyacanthus
ENSIPUG00000013084	prpf19	100	85.341	ENSAMEG00000007375	PRPF19	99	85.341	Ailuropoda_melanoleuca
ENSIPUG00000013084	prpf19	99	93.613	ENSACIG00000015876	prpf19	99	93.056	Amphilophus_citrinellus
ENSIPUG00000013084	prpf19	100	95.446	ENSAOCG00000020444	prpf19	100	95.446	Amphiprion_ocellaris
ENSIPUG00000013084	prpf19	100	95.446	ENSAPEG00000016076	prpf19	100	95.446	Amphiprion_percula
ENSIPUG00000013084	prpf19	100	95.248	ENSATEG00000008840	prpf19	100	95.248	Anabas_testudineus
ENSIPUG00000013084	prpf19	100	85.941	ENSACAG00000017797	PRPF19	100	85.941	Anolis_carolinensis
ENSIPUG00000013084	prpf19	100	85.545	ENSANAG00000021762	PRPF19	100	85.545	Aotus_nancymaae
ENSIPUG00000013084	prpf19	100	94.059	ENSACLG00000009416	prpf19	100	94.059	Astatotilapia_calliptera
ENSIPUG00000013084	prpf19	100	97.426	ENSAMXG00000011547	prpf19	100	97.426	Astyanax_mexicanus
ENSIPUG00000013084	prpf19	100	85.743	ENSBTAG00000014366	PRPF19	100	85.743	Bos_taurus
ENSIPUG00000013084	prpf19	100	52.860	WBGene00020423	prp-19	100	52.860	Caenorhabditis_elegans
ENSIPUG00000013084	prpf19	100	85.545	ENSCJAG00000016509	PRPF19	100	85.545	Callithrix_jacchus
ENSIPUG00000013084	prpf19	100	85.545	ENSCAFG00000016438	PRPF19	98	85.545	Canis_familiaris
ENSIPUG00000013084	prpf19	100	85.545	ENSCAFG00020012565	PRPF19	100	85.545	Canis_lupus_dingo
ENSIPUG00000013084	prpf19	100	85.743	ENSCHIG00000018281	PRPF19	100	85.743	Capra_hircus
ENSIPUG00000013084	prpf19	99	85.600	ENSTSYG00000006860	PRPF19	99	85.600	Carlito_syrichta
ENSIPUG00000013084	prpf19	99	86.000	ENSCAPG00000016225	PRPF19	100	86.000	Cavia_aperea
ENSIPUG00000013084	prpf19	100	85.941	ENSCPOG00000020688	PRPF19	100	85.941	Cavia_porcellus
ENSIPUG00000013084	prpf19	100	85.545	ENSCCAG00000025839	PRPF19	100	85.545	Cebus_capucinus
ENSIPUG00000013084	prpf19	100	85.743	ENSCATG00000041921	PRPF19	100	85.743	Cercocebus_atys
ENSIPUG00000013084	prpf19	99	86.145	ENSCLAG00000003338	PRPF19	100	86.145	Chinchilla_lanigera
ENSIPUG00000013084	prpf19	100	85.743	ENSCSAG00000006254	PRPF19	100	85.743	Chlorocebus_sabaeus
ENSIPUG00000013084	prpf19	62	75.962	ENSCHOG00000005840	PRPF19	100	75.962	Choloepus_hoffmanni
ENSIPUG00000013084	prpf19	100	85.294	ENSCPBG00000027061	PRPF19	100	84.752	Chrysemys_picta_bellii
ENSIPUG00000013084	prpf19	99	67.800	ENSCING00000016625	-	100	67.800	Ciona_intestinalis
ENSIPUG00000013084	prpf19	99	69.760	ENSCSAVG00000002027	-	100	68.775	Ciona_savignyi
ENSIPUG00000013084	prpf19	99	83.660	ENSCANG00000027155	PRPF19	99	42.857	Colobus_angolensis_palliatus
ENSIPUG00000013084	prpf19	100	85.743	ENSCGRG00001002699	Prpf19	100	85.743	Cricetulus_griseus_chok1gshd
ENSIPUG00000013084	prpf19	100	85.347	ENSCGRG00000008964	Prpf19	100	85.347	Cricetulus_griseus_crigri
ENSIPUG00000013084	prpf19	100	94.455	ENSCSEG00000010411	prpf19	100	94.455	Cynoglossus_semilaevis
ENSIPUG00000013084	prpf19	100	92.871	ENSCVAG00000012011	prpf19	100	92.871	Cyprinodon_variegatus
ENSIPUG00000013084	prpf19	100	96.040	ENSDARG00000015239	prpf19	100	96.040	Danio_rerio
ENSIPUG00000013084	prpf19	100	85.743	ENSDNOG00000005797	PRPF19	100	85.743	Dasypus_novemcinctus
ENSIPUG00000013084	prpf19	100	85.545	ENSDORG00000006906	Prpf19	100	85.545	Dipodomys_ordii
ENSIPUG00000013084	prpf19	100	67.456	FBgn0261119	Prp19	99	67.456	Drosophila_melanogaster
ENSIPUG00000013084	prpf19	100	75.050	ENSETEG00000012295	PRPF19	100	75.050	Echinops_telfairi
ENSIPUG00000013084	prpf19	83	78.860	ENSEBUG00000013075	prpf19	100	78.860	Eptatretus_burgeri
ENSIPUG00000013084	prpf19	100	85.535	ENSEASG00005008056	PRPF19	98	85.535	Equus_asinus_asinus
ENSIPUG00000013084	prpf19	100	85.545	ENSECAG00000007322	PRPF19	100	85.545	Equus_caballus
ENSIPUG00000013084	prpf19	100	86.931	ENSELUG00000004578	prpf19	100	86.931	Esox_lucius
ENSIPUG00000013084	prpf19	100	90.891	ENSELUG00000020276	-	100	90.891	Esox_lucius
ENSIPUG00000013084	prpf19	100	85.545	ENSFCAG00000013668	PRPF19	100	85.545	Felis_catus
ENSIPUG00000013084	prpf19	100	84.158	ENSFALG00000012084	PRPF19	100	84.158	Ficedula_albicollis
ENSIPUG00000013084	prpf19	84	85.343	ENSFDAG00000009420	PRPF19	96	85.343	Fukomys_damarensis
ENSIPUG00000013084	prpf19	100	93.069	ENSFHEG00000022135	prpf19	100	93.069	Fundulus_heteroclitus
ENSIPUG00000013084	prpf19	100	93.861	ENSGMOG00000014756	prpf19	100	93.861	Gadus_morhua
ENSIPUG00000013084	prpf19	100	84.356	ENSGALG00000036530	PRPF19	100	84.356	Gallus_gallus
ENSIPUG00000013084	prpf19	100	92.277	ENSGAFG00000008931	prpf19	100	92.277	Gambusia_affinis
ENSIPUG00000013084	prpf19	100	94.059	ENSGACG00000017976	prpf19	100	94.059	Gasterosteus_aculeatus
ENSIPUG00000013084	prpf19	100	84.950	ENSGAGG00000013328	PRPF19	100	84.950	Gopherus_agassizii
ENSIPUG00000013084	prpf19	100	85.743	ENSGGOG00000008648	PRPF19	100	85.743	Gorilla_gorilla
ENSIPUG00000013084	prpf19	100	94.059	ENSHBUG00000008394	prpf19	100	94.059	Haplochromis_burtoni
ENSIPUG00000013084	prpf19	100	85.743	ENSHGLG00000003934	PRPF19	100	85.743	Heterocephalus_glaber_female
ENSIPUG00000013084	prpf19	99	70.714	ENSHGLG00100010649	PRPF19	100	69.277	Heterocephalus_glaber_male
ENSIPUG00000013084	prpf19	100	92.871	ENSHCOG00000016720	prpf19	100	92.871	Hippocampus_comes
ENSIPUG00000013084	prpf19	100	85.545	ENSSTOG00000001598	PRPF19	100	85.545	Ictidomys_tridecemlineatus
ENSIPUG00000013084	prpf19	100	85.545	ENSJJAG00000020609	Prpf19	100	85.545	Jaculus_jaculus
ENSIPUG00000013084	prpf19	100	92.871	ENSKMAG00000010257	prpf19	100	92.871	Kryptolebias_marmoratus
ENSIPUG00000013084	prpf19	100	94.257	ENSLBEG00000027436	prpf19	100	94.257	Labrus_bergylta
ENSIPUG00000013084	prpf19	100	84.752	ENSLACG00000003434	PRPF19	100	84.752	Latimeria_chalumnae
ENSIPUG00000013084	prpf19	91	80.638	ENSLOCG00000008123	prpf19	100	80.638	Lepisosteus_oculatus
ENSIPUG00000013084	prpf19	100	82.759	ENSLAFG00000002644	PRPF19	100	82.759	Loxodonta_africana
ENSIPUG00000013084	prpf19	100	85.743	ENSMFAG00000036743	PRPF19	100	85.743	Macaca_fascicularis
ENSIPUG00000013084	prpf19	100	85.743	ENSMMUG00000014530	PRPF19	100	85.743	Macaca_mulatta
ENSIPUG00000013084	prpf19	100	85.743	ENSMNEG00000044485	PRPF19	100	85.743	Macaca_nemestrina
ENSIPUG00000013084	prpf19	100	85.743	ENSMLEG00000043312	PRPF19	100	85.743	Mandrillus_leucophaeus
ENSIPUG00000013084	prpf19	100	95.248	ENSMAMG00000006843	prpf19	100	95.474	Mastacembelus_armatus
ENSIPUG00000013084	prpf19	100	94.059	ENSMZEG00005013356	prpf19	100	94.059	Maylandia_zebra
ENSIPUG00000013084	prpf19	98	79.600	ENSMGAG00000003180	PRPF19	100	79.600	Meleagris_gallopavo
ENSIPUG00000013084	prpf19	100	85.149	ENSMAUG00000012585	Prpf19	100	85.149	Mesocricetus_auratus
ENSIPUG00000013084	prpf19	100	85.743	ENSMICG00000011236	PRPF19	100	85.743	Microcebus_murinus
ENSIPUG00000013084	prpf19	100	85.743	ENSMOCG00000010383	Prpf19	100	85.743	Microtus_ochrogaster
ENSIPUG00000013084	prpf19	100	95.644	ENSMMOG00000003138	prpf19	100	95.644	Mola_mola
ENSIPUG00000013084	prpf19	100	85.743	ENSMODG00000020338	PRPF19	100	85.743	Monodelphis_domestica
ENSIPUG00000013084	prpf19	99	85.798	ENSMALG00000010981	prpf19	99	85.798	Monopterus_albus
ENSIPUG00000013084	prpf19	100	85.743	MGP_CAROLIEiJ_G0022704	Prpf19	100	85.743	Mus_caroli
ENSIPUG00000013084	prpf19	100	85.743	ENSMUSG00000024735	Prpf19	100	85.743	Mus_musculus
ENSIPUG00000013084	prpf19	100	85.743	MGP_PahariEiJ_G0014198	Prpf19	100	85.743	Mus_pahari
ENSIPUG00000013084	prpf19	100	85.743	MGP_SPRETEiJ_G0023618	Prpf19	100	85.743	Mus_spretus
ENSIPUG00000013084	prpf19	100	85.545	ENSMPUG00000014432	PRPF19	100	85.545	Mustela_putorius_furo
ENSIPUG00000013084	prpf19	100	83.269	ENSMLUG00000017597	PRPF19	100	83.269	Myotis_lucifugus
ENSIPUG00000013084	prpf19	100	85.743	ENSNGAG00000012671	Prpf19	100	85.743	Nannospalax_galili
ENSIPUG00000013084	prpf19	100	94.257	ENSNBRG00000000055	prpf19	100	94.257	Neolamprologus_brichardi
ENSIPUG00000013084	prpf19	100	85.743	ENSNLEG00000013618	PRPF19	100	85.743	Nomascus_leucogenys
ENSIPUG00000013084	prpf19	99	82.932	ENSOPRG00000008630	PRPF19	100	82.932	Ochotona_princeps
ENSIPUG00000013084	prpf19	100	86.139	ENSODEG00000004043	PRPF19	100	86.139	Octodon_degus
ENSIPUG00000013084	prpf19	100	94.257	ENSONIG00000004880	prpf19	100	94.257	Oreochromis_niloticus
ENSIPUG00000013084	prpf19	100	82.319	ENSOCUG00000015689	PRPF19	100	82.319	Oryctolagus_cuniculus
ENSIPUG00000013084	prpf19	100	93.465	ENSORLG00000004666	prpf19	100	93.465	Oryzias_latipes
ENSIPUG00000013084	prpf19	100	93.465	ENSORLG00020013561	prpf19	100	93.465	Oryzias_latipes_hni
ENSIPUG00000013084	prpf19	100	93.465	ENSORLG00015022196	prpf19	100	93.465	Oryzias_latipes_hsok
ENSIPUG00000013084	prpf19	100	93.069	ENSOMEG00000004424	prpf19	100	93.069	Oryzias_melastigma
ENSIPUG00000013084	prpf19	100	85.545	ENSOGAG00000016756	PRPF19	100	85.545	Otolemur_garnettii
ENSIPUG00000013084	prpf19	100	85.743	ENSOARG00000015596	PRPF19	100	85.743	Ovis_aries
ENSIPUG00000013084	prpf19	99	84.086	ENSPPAG00000030246	PRPF19	100	84.086	Pan_paniscus
ENSIPUG00000013084	prpf19	100	85.545	ENSPPRG00000002470	PRPF19	100	85.545	Panthera_pardus
ENSIPUG00000013084	prpf19	99	85.743	ENSPTIG00000006541	PRPF19	99	85.743	Panthera_tigris_altaica
ENSIPUG00000013084	prpf19	100	85.743	ENSPTRG00000003724	PRPF19	100	85.743	Pan_troglodytes
ENSIPUG00000013084	prpf19	100	85.743	ENSPANG00000002762	PRPF19	100	85.743	Papio_anubis
ENSIPUG00000013084	prpf19	100	95.050	ENSPKIG00000019715	prpf19	100	95.050	Paramormyrops_kingsleyae
ENSIPUG00000013084	prpf19	83	84.524	ENSPSIG00000007497	PRPF19	100	84.524	Pelodiscus_sinensis
ENSIPUG00000013084	prpf19	100	93.465	ENSPMGG00000017527	prpf19	100	93.465	Periophthalmus_magnuspinnatus
ENSIPUG00000013084	prpf19	100	85.149	ENSPEMG00000019270	Prpf19	100	85.149	Peromyscus_maniculatus_bairdii
ENSIPUG00000013084	prpf19	99	84.599	ENSPCIG00000003485	PRPF19	80	84.778	Phascolarctos_cinereus
ENSIPUG00000013084	prpf19	100	92.673	ENSPFOG00000002558	prpf19	100	92.673	Poecilia_formosa
ENSIPUG00000013084	prpf19	100	92.673	ENSPLAG00000017942	prpf19	100	92.673	Poecilia_latipinna
ENSIPUG00000013084	prpf19	100	92.673	ENSPMEG00000008638	prpf19	100	92.673	Poecilia_mexicana
ENSIPUG00000013084	prpf19	100	93.182	ENSPREG00000002489	prpf19	96	93.182	Poecilia_reticulata
ENSIPUG00000013084	prpf19	100	85.535	ENSPPYG00000003202	PRPF19	91	85.535	Pongo_abelii
ENSIPUG00000013084	prpf19	100	85.149	ENSPCAG00000001930	PRPF19	100	85.149	Procavia_capensis
ENSIPUG00000013084	prpf19	100	86.047	ENSPCOG00000014017	PRPF19	100	86.047	Propithecus_coquereli
ENSIPUG00000013084	prpf19	100	85.743	ENSPVAG00000014669	PRPF19	100	85.743	Pteropus_vampyrus
ENSIPUG00000013084	prpf19	100	94.059	ENSPNYG00000000859	prpf19	100	94.059	Pundamilia_nyererei
ENSIPUG00000013084	prpf19	100	97.426	ENSPNAG00000019245	prpf19	100	97.426	Pygocentrus_nattereri
ENSIPUG00000013084	prpf19	100	85.743	ENSRNOG00000020897	Prpf19	100	85.743	Rattus_norvegicus
ENSIPUG00000013084	prpf19	100	85.743	ENSRBIG00000036672	PRPF19	100	85.743	Rhinopithecus_bieti
ENSIPUG00000013084	prpf19	100	85.743	ENSRROG00000041572	PRPF19	100	85.743	Rhinopithecus_roxellana
ENSIPUG00000013084	prpf19	100	85.545	ENSSBOG00000022840	PRPF19	100	85.545	Saimiri_boliviensis_boliviensis
ENSIPUG00000013084	prpf19	100	85.743	ENSSHAG00000009462	PRPF19	100	85.743	Sarcophilus_harrisii
ENSIPUG00000013084	prpf19	100	93.663	ENSSFOG00015001236	prpf19	100	93.663	Scleropages_formosus
ENSIPUG00000013084	prpf19	100	95.050	ENSSMAG00000002273	prpf19	100	95.050	Scophthalmus_maximus
ENSIPUG00000013084	prpf19	100	95.446	ENSSDUG00000003299	prpf19	100	95.446	Seriola_dumerili
ENSIPUG00000013084	prpf19	100	95.446	ENSSLDG00000003019	prpf19	100	95.446	Seriola_lalandi_dorsalis
ENSIPUG00000013084	prpf19	100	84.554	ENSSPUG00000019328	PRPF19	100	84.554	Sphenodon_punctatus
ENSIPUG00000013084	prpf19	100	95.446	ENSSPAG00000008546	prpf19	100	95.446	Stegastes_partitus
ENSIPUG00000013084	prpf19	100	85.545	ENSSSCG00000013107	PRPF19	100	85.545	Sus_scrofa
ENSIPUG00000013084	prpf19	100	84.356	ENSTGUG00000006319	PRPF19	100	84.356	Taeniopygia_guttata
ENSIPUG00000013084	prpf19	100	93.267	ENSTRUG00000008502	prpf19	100	93.267	Takifugu_rubripes
ENSIPUG00000013084	prpf19	100	91.916	ENSTNIG00000014219	prpf19	76	91.916	Tetraodon_nigroviridis
ENSIPUG00000013084	prpf19	100	85.347	ENSTTRG00000012476	PRPF19	100	85.347	Tursiops_truncatus
ENSIPUG00000013084	prpf19	100	85.545	ENSUAMG00000011280	PRPF19	100	85.545	Ursus_americanus
ENSIPUG00000013084	prpf19	84	84.870	ENSUMAG00000011609	PRPF19	83	84.870	Ursus_maritimus
ENSIPUG00000013084	prpf19	99	85.934	ENSVPAG00000010516	PRPF19	100	85.934	Vicugna_pacos
ENSIPUG00000013084	prpf19	100	85.545	ENSVVUG00000005291	PRPF19	100	85.545	Vulpes_vulpes
ENSIPUG00000013084	prpf19	100	80.455	ENSXETG00000011938	prpf19	100	80.455	Xenopus_tropicalis
ENSIPUG00000013084	prpf19	100	92.475	ENSXCOG00000003141	prpf19	100	92.475	Xiphophorus_couchianus
ENSIPUG00000013084	prpf19	100	92.673	ENSXMAG00000008485	prpf19	100	92.673	Xiphophorus_maculatus