EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000013088 (Gene tree)
Gene ID
108271909
Gene Symbol
hdlbp
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
16644 bases
Position
chr11:12763343-12779986
Accession
108271909
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000019421KH_1PF00013.297.6e-181114
ENSIPUP00000019421KH_1PF00013.297.6e-181214
ENSIPUP00000019421KH_1PF00013.297.6e-181314
ENSIPUP00000019421KH_1PF00013.297.6e-181414
ENSIPUP00000019421KH_1PF00013.297.6e-181514
ENSIPUP00000019421KH_1PF00013.297.6e-181614
ENSIPUP00000019421KH_1PF00013.297.6e-181714
ENSIPUP00000019421KH_1PF00013.297.6e-181814
ENSIPUP00000019421KH_1PF00013.297.6e-181914
ENSIPUP00000019421KH_1PF00013.297.6e-1811014
ENSIPUP00000019421KH_1PF00013.297.6e-1811114
ENSIPUP00000019421KH_1PF00013.297.6e-1811214
ENSIPUP00000019421KH_1PF00013.297.6e-1811314
ENSIPUP00000019421KH_1PF00013.297.6e-1811414
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000020259-4652XM_017479844ENSIPUP000000194211283 (aa)XP_017335333A0A2D0RXV5
Gene Model
Click here to download ENSIPUG00000013088's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013088's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000013088hdlbp8390.602ENSIPUG00000013177-9190.602
ENSIPUG00000013088hdlbp10069.177ENSIPUG00000003291HDLBP10070.009
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000013088hdlbp9978.866ENSG00000115677HDLBP9784.942Homo_sapiens
ENSIPUG00000013088hdlbp10090.109ENSAPOG00000012609hdlbpa10090.187Acanthochromis_polyacanthus
ENSIPUG00000013088hdlbp9979.099ENSAMEG00000016552HDLBP10079.099Ailuropoda_melanoleuca
ENSIPUG00000013088hdlbp10086.910ENSACIG00000006015hdlbpa10081.372Amphilophus_citrinellus
ENSIPUG00000013088hdlbp10089.953ENSAOCG00000000300hdlbpa10090.031Amphiprion_ocellaris
ENSIPUG00000013088hdlbp10089.875ENSAPEG00000000522hdlbpa9991.199Amphiprion_percula
ENSIPUG00000013088hdlbp10089.486ENSATEG00000009748hdlbpa10089.486Anabas_testudineus
ENSIPUG00000013088hdlbp9979.643ENSACAG00000001556HDLBP10079.643Anolis_carolinensis
ENSIPUG00000013088hdlbp9978.710ENSANAG00000020545HDLBP10078.710Aotus_nancymaae
ENSIPUG00000013088hdlbp10089.408ENSACLG00000025965hdlbpa10089.486Astatotilapia_calliptera
ENSIPUG00000013088hdlbp9294.576ENSAMXG00000004221hdlbpa10094.576Astyanax_mexicanus
ENSIPUG00000013088hdlbp9977.933ENSBTAG00000004315HDLBP10077.933Bos_taurus
ENSIPUG00000013088hdlbp9978.588ENSCJAG00000006152HDLBP10078.588Callithrix_jacchus
ENSIPUG00000013088hdlbp9978.866ENSCAFG00000012913HDLBP10080.558Canis_familiaris
ENSIPUG00000013088hdlbp9978.866ENSCAFG00020025089HDLBP10078.866Canis_lupus_dingo
ENSIPUG00000013088hdlbp9978.011ENSCHIG00000022364HDLBP10078.011Capra_hircus
ENSIPUG00000013088hdlbp9978.322ENSTSYG00000002379HDLBP10078.322Carlito_syrichta
ENSIPUG00000013088hdlbp9976.012ENSCAPG00000008584HDLBP10076.012Cavia_aperea
ENSIPUG00000013088hdlbp9978.816ENSCPOG00000006297HDLBP10078.816Cavia_porcellus
ENSIPUG00000013088hdlbp9158.200ENSCCAG00000037920-10058.200Cebus_capucinus
ENSIPUG00000013088hdlbp9978.788ENSCCAG00000023361-10078.788Cebus_capucinus
ENSIPUG00000013088hdlbp9979.088ENSCATG00000039363HDLBP10078.866Cercocebus_atys
ENSIPUG00000013088hdlbp9978.894ENSCLAG00000002365HDLBP10078.894Chinchilla_lanigera
ENSIPUG00000013088hdlbp9978.809ENSCSAG00000005781HDLBP10078.809Chlorocebus_sabaeus
ENSIPUG00000013088hdlbp8959.419ENSCHOG00000003882-9959.419Choloepus_hoffmanni
ENSIPUG00000013088hdlbp9978.322ENSCPBG00000002442HDLBP10078.322Chrysemys_picta_bellii
ENSIPUG00000013088hdlbp9978.943ENSCANG00000033571HDLBP10078.943Colobus_angolensis_palliatus
ENSIPUG00000013088hdlbp8944.167ENSCGRG000010105704921511C20Rik10044.167Cricetulus_griseus_chok1gshd
ENSIPUG00000013088hdlbp9978.477ENSCGRG00001006086Hdlbp10078.477Cricetulus_griseus_chok1gshd
ENSIPUG00000013088hdlbp9744.106ENSCGRG00000015720Gm3829944.106Cricetulus_griseus_crigri
ENSIPUG00000013088hdlbp9978.477ENSCGRG00000014444Hdlbp10078.477Cricetulus_griseus_crigri
ENSIPUG00000013088hdlbp10088.309ENSCSEG00000008853hdlbpa10088.309Cynoglossus_semilaevis
ENSIPUG00000013088hdlbp10087.685ENSCVAG00000017892hdlbpa10087.685Cyprinodon_variegatus
ENSIPUG00000013088hdlbp10090.109ENSDARG00000009830hdlbpa10090.343Danio_rerio
ENSIPUG00000013088hdlbp9976.875ENSDNOG00000006753HDLBP10076.875Dasypus_novemcinctus
ENSIPUG00000013088hdlbp9676.800ENSETEG00000005416-7976.800Echinops_telfairi
ENSIPUG00000013088hdlbp9978.943ENSEASG00005008249HDLBP10078.943Equus_asinus_asinus
ENSIPUG00000013088hdlbp9553.223ENSECAG00000030885-9653.223Equus_caballus
ENSIPUG00000013088hdlbp9978.943ENSECAG00000012829HDLBP10078.943Equus_caballus
ENSIPUG00000013088hdlbp9648.264ENSECAG00000028723-9748.264Equus_caballus
ENSIPUG00000013088hdlbp9270.525ENSEEUG00000014648HDLBP10070.525Erinaceus_europaeus
ENSIPUG00000013088hdlbp10086.360ENSELUG00000010700hdlbpa10086.360Esox_lucius
ENSIPUG00000013088hdlbp9979.021ENSFCAG00000010455HDLBP10079.021Felis_catus
ENSIPUG00000013088hdlbp9981.352ENSFALG00000003437HDLBP10081.507Ficedula_albicollis
ENSIPUG00000013088hdlbp9978.911ENSFDAG00000000456HDLBP10078.911Fukomys_damarensis
ENSIPUG00000013088hdlbp10088.084ENSFHEG00000004848hdlbpa10088.240Fundulus_heteroclitus
ENSIPUG00000013088hdlbp10085.725ENSGMOG00000009932hdlbpa10085.803Gadus_morhua
ENSIPUG00000013088hdlbp9980.963ENSGALG00000005823HDLBP10081.274Gallus_gallus
ENSIPUG00000013088hdlbp10058.289ENSGAFG00000016766hdlbpa10058.289Gambusia_affinis
ENSIPUG00000013088hdlbp10086.381ENSGACG00000004648hdlbpa10086.537Gasterosteus_aculeatus
ENSIPUG00000013088hdlbp9980.886ENSGAGG00000004256HDLBP10080.886Gopherus_agassizii
ENSIPUG00000013088hdlbp9978.866ENSGGOG00000004392HDLBP10078.866Gorilla_gorilla
ENSIPUG00000013088hdlbp10089.564ENSHBUG00000001136hdlbpa10089.642Haplochromis_burtoni
ENSIPUG00000013088hdlbp9978.444ENSHGLG00000004910HDLBP10078.366Heterocephalus_glaber_female
ENSIPUG00000013088hdlbp9978.444ENSHGLG00100013326HDLBP10078.366Heterocephalus_glaber_male
ENSIPUG00000013088hdlbp10087.685ENSHCOG00000014837hdlbpa10087.782Hippocampus_comes
ENSIPUG00000013088hdlbp9978.366ENSSTOG00000013331HDLBP10078.755Ictidomys_tridecemlineatus
ENSIPUG00000013088hdlbp8940.921ENSJJAG00000013712-9340.921Jaculus_jaculus
ENSIPUG00000013088hdlbp9978.943ENSJJAG00000003596Hdlbp10078.943Jaculus_jaculus
ENSIPUG00000013088hdlbp10087.850ENSKMAG00000007571hdlbpa10087.928Kryptolebias_marmoratus
ENSIPUG00000013088hdlbp10088.199ENSLBEG00000027461hdlbpa10088.432Labrus_bergylta
ENSIPUG00000013088hdlbp10082.321ENSLACG00000003592HDLBP10082.362Latimeria_chalumnae
ENSIPUG00000013088hdlbp10088.638ENSLOCG00000006278hdlbpa10088.638Lepisosteus_oculatus
ENSIPUG00000013088hdlbp9978.555ENSLAFG00000014826HDLBP10078.555Loxodonta_africana
ENSIPUG00000013088hdlbp9978.866ENSMFAG00000033641HDLBP10078.866Macaca_fascicularis
ENSIPUG00000013088hdlbp9978.732ENSMMUG00000004730HDLBP10078.732Macaca_mulatta
ENSIPUG00000013088hdlbp9978.866ENSMNEG00000024260HDLBP10078.866Macaca_nemestrina
ENSIPUG00000013088hdlbp9978.866ENSMLEG00000042734HDLBP10078.866Mandrillus_leucophaeus
ENSIPUG00000013088hdlbp10089.564ENSMAMG00000008611hdlbpa10089.642Mastacembelus_armatus
ENSIPUG00000013088hdlbp10089.408ENSMZEG00005009513hdlbpa10089.486Maylandia_zebra
ENSIPUG00000013088hdlbp9978.555ENSMGAG00000003686HDLBP10083.304Meleagris_gallopavo
ENSIPUG00000013088hdlbp9979.021ENSMAUG00000017743Hdlbp10079.021Mesocricetus_auratus
ENSIPUG00000013088hdlbp9978.788ENSMICG00000004569HDLBP10078.788Microcebus_murinus
ENSIPUG00000013088hdlbp9978.866ENSMOCG00000006679Hdlbp10078.866Microtus_ochrogaster
ENSIPUG00000013088hdlbp9883.786ENSMMOG00000006880hdlbpa9983.786Mola_mola
ENSIPUG00000013088hdlbp9979.414ENSMODG00000016033HDLBP10079.337Monodelphis_domestica
ENSIPUG00000013088hdlbp10089.261ENSMALG00000015095hdlbpa10089.339Monopterus_albus
ENSIPUG00000013088hdlbp8943.096MGP_CAROLIEiJ_G00333744921511C20Rik10043.096Mus_caroli
ENSIPUG00000013088hdlbp9443.817MGP_CAROLIEiJ_G0033373Gm3829643.528Mus_caroli
ENSIPUG00000013088hdlbp9978.710MGP_CAROLIEiJ_G0014456Hdlbp10078.710Mus_caroli
ENSIPUG00000013088hdlbp9443.402ENSMUSG00000062791Gm3829543.402Mus_musculus
ENSIPUG00000013088hdlbp9978.710ENSMUSG00000034088Hdlbp10078.710Mus_musculus
ENSIPUG00000013088hdlbp8942.887ENSMUSG000000498154921511C20Rik10042.887Mus_musculus
ENSIPUG00000013088hdlbp9978.710MGP_PahariEiJ_G0027692Hdlbp10078.710Mus_pahari
ENSIPUG00000013088hdlbp9344.194MGP_PahariEiJ_G0031913Gm3829444.194Mus_pahari
ENSIPUG00000013088hdlbp8742.050MGP_PahariEiJ_G00319144921511C20Rik10042.050Mus_pahari
ENSIPUG00000013088hdlbp9443.320MGP_SPRETEiJ_G0034538Gm3829543.320Mus_spretus
ENSIPUG00000013088hdlbp9042.380MGP_SPRETEiJ_G00345394921511C20Rik10042.380Mus_spretus
ENSIPUG00000013088hdlbp9978.710MGP_SPRETEiJ_G0015260Hdlbp10078.710Mus_spretus
ENSIPUG00000013088hdlbp9978.866ENSMPUG00000000163HDLBP10078.866Mustela_putorius_furo
ENSIPUG00000013088hdlbp9978.833ENSMLUG00000005628HDLBP10078.833Myotis_lucifugus
ENSIPUG00000013088hdlbp9979.021ENSNGAG00000014873Hdlbp10079.021Nannospalax_galili
ENSIPUG00000013088hdlbp9790.472ENSNBRG00000000051hdlbpa9990.552Neolamprologus_brichardi
ENSIPUG00000013088hdlbp9372.081ENSNLEG00000031018-9971.429Nomascus_leucogenys
ENSIPUG00000013088hdlbp9978.710ENSNLEG00000013818HDLBP10078.710Nomascus_leucogenys
ENSIPUG00000013088hdlbp9987.031ENSMEUG00000008427HDLBP8787.031Notamacropus_eugenii
ENSIPUG00000013088hdlbp9380.100ENSOPRG00000011965-9480.100Ochotona_princeps
ENSIPUG00000013088hdlbp9978.505ENSODEG00000012313-10078.505Octodon_degus
ENSIPUG00000013088hdlbp9974.065ENSODEG00000017391-10074.065Octodon_degus
ENSIPUG00000013088hdlbp10089.408ENSONIG00000019272hdlbpa10089.486Oreochromis_niloticus
ENSIPUG00000013088hdlbp5983.803ENSOANG00000021864-10083.803Ornithorhynchus_anatinus
ENSIPUG00000013088hdlbp9980.311ENSOANG00000011759-10080.311Ornithorhynchus_anatinus
ENSIPUG00000013088hdlbp9978.788ENSOCUG00000012667HDLBP10078.788Oryctolagus_cuniculus
ENSIPUG00000013088hdlbp10088.390ENSORLG00000002226hdlbpa10088.545Oryzias_latipes
ENSIPUG00000013088hdlbp10088.390ENSORLG00020007905hdlbpa10088.545Oryzias_latipes_hni
ENSIPUG00000013088hdlbp10088.313ENSORLG00015004126hdlbpa10088.467Oryzias_latipes_hsok
ENSIPUG00000013088hdlbp10086.102ENSOMEG00000000247hdlbpa10086.258Oryzias_melastigma
ENSIPUG00000013088hdlbp9978.089ENSOGAG00000000738HDLBP10078.089Otolemur_garnettii
ENSIPUG00000013088hdlbp9976.411ENSOARG00000017870HDLBP10076.411Ovis_aries
ENSIPUG00000013088hdlbp9978.710ENSPPAG00000023318HDLBP10078.710Pan_paniscus
ENSIPUG00000013088hdlbp9978.943ENSPPRG00000010215HDLBP10078.943Panthera_pardus
ENSIPUG00000013088hdlbp9377.317ENSPTIG00000009328HDLBP9777.317Panthera_tigris_altaica
ENSIPUG00000013088hdlbp9978.788ENSPTRG00000013121HDLBP10078.788Pan_troglodytes
ENSIPUG00000013088hdlbp9978.866ENSPANG00000011832HDLBP10078.866Papio_anubis
ENSIPUG00000013088hdlbp10087.626ENSPKIG00000002392hdlbpa10087.626Paramormyrops_kingsleyae
ENSIPUG00000013088hdlbp9481.159ENSPSIG00000010068HDLBP10081.159Pelodiscus_sinensis
ENSIPUG00000013088hdlbp10077.798ENSPMGG00000002102hdlbpa10077.798Periophthalmus_magnuspinnatus
ENSIPUG00000013088hdlbp9978.943ENSPEMG00000017704Hdlbp10078.943Peromyscus_maniculatus_bairdii
ENSIPUG00000013088hdlbp9980.595ENSPCIG00000015375HDLBP9480.516Phascolarctos_cinereus
ENSIPUG00000013088hdlbp10088.318ENSPFOG00000000236hdlbpa10088.318Poecilia_formosa
ENSIPUG00000013088hdlbp9588.797ENSPLAG00000006033hdlbpa10088.880Poecilia_latipinna
ENSIPUG00000013088hdlbp10088.240ENSPMEG00000006627hdlbpa10088.318Poecilia_mexicana
ENSIPUG00000013088hdlbp10063.007ENSPREG00000014450hdlbpa10063.007Poecilia_reticulata
ENSIPUG00000013088hdlbp9978.710ENSPPYG00000013351HDLBP10078.710Pongo_abelii
ENSIPUG00000013088hdlbp9972.147ENSPCAG00000011136HDLBP7972.147Procavia_capensis
ENSIPUG00000013088hdlbp9969.492ENSPCOG00000021622HDLBP10069.492Propithecus_coquereli
ENSIPUG00000013088hdlbp9978.132ENSPVAG00000000555HDLBP10078.132Pteropus_vampyrus
ENSIPUG00000013088hdlbp10089.486ENSPNYG00000020753hdlbpa10089.564Pundamilia_nyererei
ENSIPUG00000013088hdlbp10088.240ENSPNAG00000029610hdlbpa10088.240Pygocentrus_nattereri
ENSIPUG00000013088hdlbp9444.545ENSRNOG00000031294RGD15631049644.545Rattus_norvegicus
ENSIPUG00000013088hdlbp9242.520ENSRNOG00000042823RGD15612309342.520Rattus_norvegicus
ENSIPUG00000013088hdlbp8842.825ENSRNOG00000028847AABR07040251.110042.825Rattus_norvegicus
ENSIPUG00000013088hdlbp9978.710ENSRNOG00000031479Hdlbp10078.710Rattus_norvegicus
ENSIPUG00000013088hdlbp9978.866ENSRBIG00000041381HDLBP10078.866Rhinopithecus_bieti
ENSIPUG00000013088hdlbp9978.866ENSRROG00000034263HDLBP10078.866Rhinopithecus_roxellana
ENSIPUG00000013088hdlbp9978.694ENSSBOG00000029714-9778.694Saimiri_boliviensis_boliviensis
ENSIPUG00000013088hdlbp9170.578ENSSBOG00000033067-9670.578Saimiri_boliviensis_boliviensis
ENSIPUG00000013088hdlbp9980.264ENSSHAG00000012422HDLBP10080.264Sarcophilus_harrisii
ENSIPUG00000013088hdlbp10089.339ENSSFOG00015018627hdlbp10089.339Scleropages_formosus
ENSIPUG00000013088hdlbp10088.863ENSSMAG00000002382hdlbpa10089.019Scophthalmus_maximus
ENSIPUG00000013088hdlbp10090.513ENSSDUG00000022258hdlbpa10090.513Seriola_dumerili
ENSIPUG00000013088hdlbp10090.435ENSSLDG00000004437hdlbpa10090.435Seriola_lalandi_dorsalis
ENSIPUG00000013088hdlbp9369.405ENSSARG00000012639HDLBP9469.405Sorex_araneus
ENSIPUG00000013088hdlbp9979.409ENSSPUG00000009182HDLBP10079.409Sphenodon_punctatus
ENSIPUG00000013088hdlbp10089.642ENSSPAG00000009145hdlbpa10089.798Stegastes_partitus
ENSIPUG00000013088hdlbp9977.778ENSSSCG00000016379HDLBP10079.459Sus_scrofa
ENSIPUG00000013088hdlbp9682.625ENSTGUG00000006189HDLBP10082.625Taeniopygia_guttata
ENSIPUG00000013088hdlbp10087.062ENSTRUG00000012148hdlbpa10087.062Takifugu_rubripes
ENSIPUG00000013088hdlbp9987.776ENSTNIG00000004185hdlbpa10087.776Tetraodon_nigroviridis
ENSIPUG00000013088hdlbp8872.956ENSTBEG00000001860HDLBP8872.956Tupaia_belangeri
ENSIPUG00000013088hdlbp9977.966ENSTTRG00000015251HDLBP7777.966Tursiops_truncatus
ENSIPUG00000013088hdlbp9979.099ENSUAMG00000018383HDLBP10079.357Ursus_americanus
ENSIPUG00000013088hdlbp9979.021ENSUMAG00000010539HDLBP10079.021Ursus_maritimus
ENSIPUG00000013088hdlbp9056.700ENSVPAG00000003112HDLBP9256.700Vicugna_pacos
ENSIPUG00000013088hdlbp9579.778ENSVVUG00000022797HDLBP9979.778Vulpes_vulpes
ENSIPUG00000013088hdlbp9978.305ENSXETG00000012164hdlbp9978.305Xenopus_tropicalis
ENSIPUG00000013088hdlbp10087.451ENSXCOG00000005943hdlbpa10087.451Xiphophorus_couchianus
ENSIPUG00000013088hdlbp10087.928ENSXMAG00000003787hdlbpa10088.006Xiphophorus_maculatus

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