EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013175 (Gene tree)
Gene ID: -
Gene Symbol: npm2b
Alias: npm2|zgc:163013
Full Name: nucleoplasmin ATPase-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1025 bases
Position: chr16:18383209-18384233
Accession: 108276815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019426	Nucleoplasmin	PF03066.15	2.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020265	-	507	XM_017488807	ENSIPUP00000019426	169 (aa)	XP_017344296	-

Gene Model

Click here to download ENSIPUG00000013175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013175's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013175	npm2b	57	39.394	ENSIPUG00000008204	npm3	65	38.235
ENSIPUG00000013175	npm2b	60	42.157	ENSIPUG00000010101	npm2a	69	42.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013175	npm2b	62	38.739	ENSG00000158806	NPM2	85	38.261	Homo_sapiens
ENSIPUG00000013175	npm2b	87	43.137	ENSACAG00000000163	-	57	44.737	Anolis_carolinensis
ENSIPUG00000013175	npm2b	62	38.739	ENSANAG00000038138	-	85	38.261	Aotus_nancymaae
ENSIPUG00000013175	npm2b	100	81.250	ENSAMXG00000038475	npm2b	93	82.386	Astyanax_mexicanus
ENSIPUG00000013175	npm2b	57	40.816	ENSAMXG00000001084	npm2a	72	38.318	Astyanax_mexicanus
ENSIPUG00000013175	npm2b	99	38.251	ENSBTAG00000046918	NPM2	59	45.133	Bos_taurus
ENSIPUG00000013175	npm2b	61	38.532	ENSCJAG00000020389	NPM2	79	38.889	Callithrix_jacchus
ENSIPUG00000013175	npm2b	93	40.000	ENSCAFG00020007666	-	53	42.241	Canis_lupus_dingo
ENSIPUG00000013175	npm2b	63	42.342	ENSCAFG00020015194	-	54	41.818	Canis_lupus_dingo
ENSIPUG00000013175	npm2b	78	41.667	ENSCAFG00020015227	-	52	41.818	Canis_lupus_dingo
ENSIPUG00000013175	npm2b	89	37.654	ENSCAFG00020015318	-	51	39.252	Canis_lupus_dingo
ENSIPUG00000013175	npm2b	99	36.612	ENSCHIG00000026056	NPM2	57	44.248	Capra_hircus
ENSIPUG00000013175	npm2b	63	40.909	ENSTSYG00000026275	NPM2	79	40.566	Carlito_syrichta
ENSIPUG00000013175	npm2b	60	36.634	ENSCAPG00000006057	NPM2	55	36.275	Cavia_aperea
ENSIPUG00000013175	npm2b	60	36.634	ENSCPOG00000039799	NPM2	55	36.275	Cavia_porcellus
ENSIPUG00000013175	npm2b	86	38.750	ENSCCAG00000035076	NPM2	85	38.261	Cebus_capucinus
ENSIPUG00000013175	npm2b	62	38.739	ENSCATG00000031833	NPM2	85	38.261	Cercocebus_atys
ENSIPUG00000013175	npm2b	62	37.838	ENSCSAG00000016588	NPM2	57	38.889	Chlorocebus_sabaeus
ENSIPUG00000013175	npm2b	62	38.739	ENSCANG00000040109	NPM2	85	38.261	Colobus_angolensis_palliatus
ENSIPUG00000013175	npm2b	57	41.837	ENSDARG00000076391	npm2a	62	41.837	Danio_rerio
ENSIPUG00000013175	npm2b	100	85.549	ENSDARG00000053963	npm2b	95	87.283	Danio_rerio
ENSIPUG00000013175	npm2b	60	35.514	ENSDORG00000012371	Npm2	50	35.514	Dipodomys_ordii
ENSIPUG00000013175	npm2b	63	43.243	ENSEASG00005018856	NPM2	55	43.810	Equus_asinus_asinus
ENSIPUG00000013175	npm2b	66	40.351	ENSELUG00000017306	-	88	40.351	Esox_lucius
ENSIPUG00000013175	npm2b	99	62.088	ENSELUG00000004822	npm2b	100	61.404	Esox_lucius
ENSIPUG00000013175	npm2b	80	36.667	ENSFDAG00000007971	NPM2	55	38.462	Fukomys_damarensis
ENSIPUG00000013175	npm2b	64	45.455	ENSGALG00000050870	NPM2	55	45.455	Gallus_gallus
ENSIPUG00000013175	npm2b	62	38.318	ENSGALG00000054664	-	70	38.318	Gallus_gallus
ENSIPUG00000013175	npm2b	62	38.739	ENSGGOG00000007071	NPM2	85	38.261	Gorilla_gorilla
ENSIPUG00000013175	npm2b	82	33.333	ENSSTOG00000013623	NPM2	60	35.659	Ictidomys_tridecemlineatus
ENSIPUG00000013175	npm2b	64	37.719	ENSJJAG00000018214	Npm2	54	37.719	Jaculus_jaculus
ENSIPUG00000013175	npm2b	90	45.625	ENSLACG00000016196	NPM2	69	50.833	Latimeria_chalumnae
ENSIPUG00000013175	npm2b	66	68.966	ENSLOCG00000014878	npm2b	90	64.407	Lepisosteus_oculatus
ENSIPUG00000013175	npm2b	90	35.754	ENSLAFG00000015584	NPM2	52	40.708	Loxodonta_africana
ENSIPUG00000013175	npm2b	62	38.739	ENSMFAG00000032098	NPM2	85	38.261	Macaca_fascicularis
ENSIPUG00000013175	npm2b	62	38.739	ENSMMUG00000002034	NPM2	85	38.261	Macaca_mulatta
ENSIPUG00000013175	npm2b	62	38.739	ENSMNEG00000010994	NPM2	85	38.261	Macaca_nemestrina
ENSIPUG00000013175	npm2b	62	38.739	ENSMLEG00000030071	NPM2	85	38.261	Mandrillus_leucophaeus
ENSIPUG00000013175	npm2b	65	37.931	ENSMICG00000030722	-	85	37.931	Microcebus_murinus
ENSIPUG00000013175	npm2b	62	39.815	ENSMOCG00000017251	Npm2	57	39.815	Microtus_ochrogaster
ENSIPUG00000013175	npm2b	60	40.000	ENSMODG00000009677	-	55	40.187	Monodelphis_domestica
ENSIPUG00000013175	npm2b	56	44.792	ENSMUSG00000047911	Npm2	57	44.792	Mus_musculus
ENSIPUG00000013175	npm2b	60	41.121	ENSMLUG00000016075	NPM2	51	41.121	Myotis_lucifugus
ENSIPUG00000013175	npm2b	86	35.849	ENSNGAG00000022056	Npm2	50	37.736	Nannospalax_galili
ENSIPUG00000013175	npm2b	62	37.838	ENSNLEG00000035765	NPM2	85	37.391	Nomascus_leucogenys
ENSIPUG00000013175	npm2b	59	42.453	ENSOPRG00000012940	NPM2	50	42.453	Ochotona_princeps
ENSIPUG00000013175	npm2b	63	44.144	ENSOANG00000020262	-	51	44.643	Ornithorhynchus_anatinus
ENSIPUG00000013175	npm2b	81	36.000	ENSOCUG00000021756	NPM2	52	40.741	Oryctolagus_cuniculus
ENSIPUG00000013175	npm2b	90	35.503	ENSPPAG00000040749	NPM2	85	38.261	Pan_paniscus
ENSIPUG00000013175	npm2b	64	42.609	ENSPPRG00000022157	NPM2	84	42.609	Panthera_pardus
ENSIPUG00000013175	npm2b	63	41.818	ENSPTIG00000011553	NPM2	83	42.157	Panthera_tigris_altaica
ENSIPUG00000013175	npm2b	90	35.503	ENSPTRG00000020045	NPM2	85	38.261	Pan_troglodytes
ENSIPUG00000013175	npm2b	62	38.739	ENSPANG00000031080	NPM2	85	38.261	Papio_anubis
ENSIPUG00000013175	npm2b	99	59.551	ENSPKIG00000009700	npm2b	90	59.551	Paramormyrops_kingsleyae
ENSIPUG00000013175	npm2b	62	38.679	ENSPKIG00000007241	npm2a	72	38.679	Paramormyrops_kingsleyae
ENSIPUG00000013175	npm2b	63	47.273	ENSPSIG00000007722	NPM2	54	47.273	Pelodiscus_sinensis
ENSIPUG00000013175	npm2b	85	37.419	ENSPEMG00000013368	Npm2	50	38.462	Peromyscus_maniculatus_bairdii
ENSIPUG00000013175	npm2b	63	40.179	ENSPCIG00000012716	-	52	40.179	Phascolarctos_cinereus
ENSIPUG00000013175	npm2b	64	39.130	ENSPCOG00000018483	-	84	39.130	Propithecus_coquereli
ENSIPUG00000013175	npm2b	60	39.623	ENSPVAG00000009848	NPM2	51	40.000	Pteropus_vampyrus
ENSIPUG00000013175	npm2b	100	82.184	ENSPNAG00000001303	npm2b	93	85.632	Pygocentrus_nattereri
ENSIPUG00000013175	npm2b	57	39.796	ENSPNAG00000018186	npm2a	65	39.796	Pygocentrus_nattereri
ENSIPUG00000013175	npm2b	62	38.739	ENSRBIG00000029235	NPM2	85	38.261	Rhinopithecus_bieti
ENSIPUG00000013175	npm2b	62	38.739	ENSRROG00000044119	NPM2	85	38.261	Rhinopithecus_roxellana
ENSIPUG00000013175	npm2b	90	39.286	ENSSBOG00000025301	NPM2	85	38.261	Saimiri_boliviensis_boliviensis
ENSIPUG00000013175	npm2b	91	54.717	ENSSFOG00015010466	npm2b	91	55.975	Scleropages_formosus
ENSIPUG00000013175	npm2b	56	47.423	ENSSPUG00000011509	NPM2	68	47.423	Sphenodon_punctatus
ENSIPUG00000013175	npm2b	62	42.342	ENSSSCG00000009610	NPM2	61	40.179	Sus_scrofa
ENSIPUG00000013175	npm2b	63	42.478	ENSUAMG00000002809	NPM2	62	37.888	Ursus_americanus
ENSIPUG00000013175	npm2b	78	34.228	ENSVVUG00000007256	-	50	36.036	Vulpes_vulpes
ENSIPUG00000013175	npm2b	70	38.017	ENSXETG00000016499	-	82	39.252	Xenopus_tropicalis
ENSIPUG00000013175	npm2b	66	52.991	ENSXETG00000010542	npm2	65	52.991	Xenopus_tropicalis