EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013327 (Gene tree)
Gene ID: 108259223
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 13014 bases
Position: chr2:3757170-3770183
Accession: 108259223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019698	ResIII	PF04851.15	1.2e-06	1	1
ENSIPUP00000019741	ResIII	PF04851.15	3.5e-06	1	1
ENSIPUP00000019741	DEAD	PF00270.29	3.3e-49	1	1
ENSIPUP00000019698	DEAD	PF00270.29	3.3e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020550	-	4765	XM_017458495	ENSIPUP00000019698	893 (aa)	XP_017313984	W5URF8
ENSIPUT00000020594	-	2625	-	ENSIPUP00000019741	874 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000013327's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013327	ddx42	64	41.497	ENSIPUG00000002564	ddx46	52	42.755
ENSIPUG00000013327	ddx42	50	37.284	ENSIPUG00000009936	ddx3xb	77	35.478
ENSIPUG00000013327	ddx42	51	38.758	ENSIPUG00000023423	ddx43	68	38.758
ENSIPUG00000013327	ddx42	51	42.539	ENSIPUG00000007815	ddx5	74	41.935
ENSIPUG00000013327	ddx42	53	36.570	ENSIPUG00000023024	ddx3xa	70	35.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013327	ddx42	100	69.175	ENSG00000198231	DDX42	97	79.381	Homo_sapiens
ENSIPUG00000013327	ddx42	93	82.139	ENSAPOG00000017675	ddx42	99	78.971	Acanthochromis_polyacanthus
ENSIPUG00000013327	ddx42	100	70.370	ENSAMEG00000003200	DDX42	80	79.657	Ailuropoda_melanoleuca
ENSIPUG00000013327	ddx42	83	78.507	ENSACIG00000007376	ddx42	99	79.297	Amphilophus_citrinellus
ENSIPUG00000013327	ddx42	100	77.814	ENSAOCG00000003520	ddx42	100	77.814	Amphiprion_ocellaris
ENSIPUG00000013327	ddx42	100	78.149	ENSAPEG00000000984	ddx42	100	77.933	Amphiprion_percula
ENSIPUG00000013327	ddx42	100	77.885	ENSATEG00000022920	ddx42	100	77.457	Anabas_testudineus
ENSIPUG00000013327	ddx42	100	69.570	ENSAPLG00000010544	DDX42	80	79.524	Anas_platyrhynchos
ENSIPUG00000013327	ddx42	100	70.043	ENSACAG00000003994	DDX42	80	79.101	Anolis_carolinensis
ENSIPUG00000013327	ddx42	100	70.607	ENSANAG00000035693	DDX42	88	83.628	Aotus_nancymaae
ENSIPUG00000013327	ddx42	93	82.277	ENSACLG00000025113	ddx42	100	79.045	Astatotilapia_calliptera
ENSIPUG00000013327	ddx42	93	85.495	ENSAMXG00000011435	ddx42	100	80.717	Astyanax_mexicanus
ENSIPUG00000013327	ddx42	100	69.239	ENSBTAG00000021058	DDX42	87	82.372	Bos_taurus
ENSIPUG00000013327	ddx42	68	52.680	WBGene00008119	C46F11.4	80	52.824	Caenorhabditis_elegans
ENSIPUG00000013327	ddx42	100	70.607	ENSCJAG00000019649	DDX42	97	79.894	Callithrix_jacchus
ENSIPUG00000013327	ddx42	100	69.433	ENSCAFG00000012818	DDX42	80	79.657	Canis_familiaris
ENSIPUG00000013327	ddx42	100	69.433	ENSCAFG00020026631	DDX42	80	79.657	Canis_lupus_dingo
ENSIPUG00000013327	ddx42	100	71.475	ENSCHIG00000014431	DDX42	82	80.185	Capra_hircus
ENSIPUG00000013327	ddx42	100	69.780	ENSTSYG00000001380	DDX42	100	67.903	Carlito_syrichta
ENSIPUG00000013327	ddx42	77	58.952	ENSCAPG00000013621	DDX42	82	63.411	Cavia_aperea
ENSIPUG00000013327	ddx42	100	69.547	ENSCPOG00000005633	DDX42	81	77.015	Cavia_porcellus
ENSIPUG00000013327	ddx42	100	66.631	ENSCCAG00000020612	DDX42	87	83.628	Cebus_capucinus
ENSIPUG00000013327	ddx42	100	70.137	ENSCATG00000030490	DDX42	81	83.628	Cercocebus_atys
ENSIPUG00000013327	ddx42	100	70.359	ENSCLAG00000003497	DDX42	80	79.657	Chinchilla_lanigera
ENSIPUG00000013327	ddx42	100	66.527	ENSCSAG00000003914	DDX42	80	75.953	Chlorocebus_sabaeus
ENSIPUG00000013327	ddx42	66	81.250	ENSCHOG00000006241	DDX42	62	81.250	Choloepus_hoffmanni
ENSIPUG00000013327	ddx42	100	68.744	ENSCPBG00000026682	DDX42	79	79.156	Chrysemys_picta_bellii
ENSIPUG00000013327	ddx42	51	66.441	ENSCING00000001837	-	97	66.441	Ciona_intestinalis
ENSIPUG00000013327	ddx42	100	70.032	ENSCANG00000034663	DDX42	89	83.706	Colobus_angolensis_palliatus
ENSIPUG00000013327	ddx42	100	69.716	ENSCGRG00001009775	Ddx42	80	80.053	Cricetulus_griseus_chok1gshd
ENSIPUG00000013327	ddx42	100	69.716	ENSCGRG00000011718	Ddx42	80	80.053	Cricetulus_griseus_crigri
ENSIPUG00000013327	ddx42	93	80.861	ENSCSEG00000021574	ddx42	100	76.605	Cynoglossus_semilaevis
ENSIPUG00000013327	ddx42	100	77.322	ENSCVAG00000011404	ddx42	100	77.283	Cyprinodon_variegatus
ENSIPUG00000013327	ddx42	100	81.699	ENSDARG00000037928	ddx42	100	80.283	Danio_rerio
ENSIPUG00000013327	ddx42	100	68.636	ENSDNOG00000007961	DDX42	81	75.629	Dasypus_novemcinctus
ENSIPUG00000013327	ddx42	100	63.675	ENSDORG00000004199	Ddx42	80	72.200	Dipodomys_ordii
ENSIPUG00000013327	ddx42	68	60.194	FBgn0036104	CG6418	84	58.074	Drosophila_melanogaster
ENSIPUG00000013327	ddx42	84	71.204	ENSEBUG00000001155	ddx42	91	71.204	Eptatretus_burgeri
ENSIPUG00000013327	ddx42	100	70.925	ENSEASG00005013089	DDX42	89	83.148	Equus_asinus_asinus
ENSIPUG00000013327	ddx42	100	69.360	ENSECAG00000022684	DDX42	80	79.657	Equus_caballus
ENSIPUG00000013327	ddx42	62	82.913	ENSEEUG00000009144	DDX42	73	82.101	Erinaceus_europaeus
ENSIPUG00000013327	ddx42	100	78.122	ENSELUG00000020593	ddx42	100	77.350	Esox_lucius
ENSIPUG00000013327	ddx42	100	69.223	ENSFCAG00000003499	DDX42	80	79.657	Felis_catus
ENSIPUG00000013327	ddx42	93	75.689	ENSFALG00000004675	DDX42	66	79.814	Ficedula_albicollis
ENSIPUG00000013327	ddx42	100	70.582	ENSFDAG00000020516	DDX42	80	79.657	Fukomys_damarensis
ENSIPUG00000013327	ddx42	100	77.538	ENSFHEG00000023290	ddx42	100	76.247	Fundulus_heteroclitus
ENSIPUG00000013327	ddx42	80	81.006	ENSGMOG00000004595	ddx42	79	80.726	Gadus_morhua
ENSIPUG00000013327	ddx42	100	69.497	ENSGALG00000000581	DDX42	79	79.392	Gallus_gallus
ENSIPUG00000013327	ddx42	95	79.954	ENSGAFG00000011846	ddx42	97	78.740	Gambusia_affinis
ENSIPUG00000013327	ddx42	100	72.414	ENSGACG00000009782	ddx42	100	72.797	Gasterosteus_aculeatus
ENSIPUG00000013327	ddx42	100	68.828	ENSGAGG00000024411	DDX42	78	79.128	Gopherus_agassizii
ENSIPUG00000013327	ddx42	100	70.233	ENSGGOG00000006779	DDX42	87	83.628	Gorilla_gorilla
ENSIPUG00000013327	ddx42	93	82.160	ENSHBUG00000008705	ddx42	100	78.936	Haplochromis_burtoni
ENSIPUG00000013327	ddx42	100	66.879	ENSHGLG00000010024	DDX42	80	75.474	Heterocephalus_glaber_female
ENSIPUG00000013327	ddx42	87	57.362	ENSHGLG00100007138	-	75	60.258	Heterocephalus_glaber_male
ENSIPUG00000013327	ddx42	100	69.401	ENSHGLG00100004479	-	80	79.392	Heterocephalus_glaber_male
ENSIPUG00000013327	ddx42	100	75.056	ENSHCOG00000003357	ddx42	99	76.438	Hippocampus_comes
ENSIPUG00000013327	ddx42	100	69.948	ENSSTOG00000008922	DDX42	80	79.657	Ictidomys_tridecemlineatus
ENSIPUG00000013327	ddx42	100	70.740	ENSJJAG00000011727	Ddx42	100	66.631	Jaculus_jaculus
ENSIPUG00000013327	ddx42	100	75.530	ENSKMAG00000009914	ddx42	100	77.297	Kryptolebias_marmoratus
ENSIPUG00000013327	ddx42	100	72.283	ENSLBEG00000004687	ddx42	100	72.848	Labrus_bergylta
ENSIPUG00000013327	ddx42	99	71.183	ENSLACG00000013476	DDX42	97	73.047	Latimeria_chalumnae
ENSIPUG00000013327	ddx42	100	77.244	ENSLOCG00000011764	ddx42	100	76.907	Lepisosteus_oculatus
ENSIPUG00000013327	ddx42	100	69.905	ENSLAFG00000003249	DDX42	80	79.789	Loxodonta_africana
ENSIPUG00000013327	ddx42	100	70.032	ENSMFAG00000031356	DDX42	81	83.628	Macaca_fascicularis
ENSIPUG00000013327	ddx42	100	70.638	ENSMMUG00000016762	DDX42	86	83.628	Macaca_mulatta
ENSIPUG00000013327	ddx42	100	70.032	ENSMNEG00000038250	DDX42	82	83.628	Macaca_nemestrina
ENSIPUG00000013327	ddx42	100	69.247	ENSMLEG00000043080	DDX42	81	80.445	Mandrillus_leucophaeus
ENSIPUG00000013327	ddx42	93	81.604	ENSMAMG00000021888	ddx42	98	76.923	Mastacembelus_armatus
ENSIPUG00000013327	ddx42	93	82.277	ENSMZEG00005023103	ddx42	100	79.045	Maylandia_zebra
ENSIPUG00000013327	ddx42	100	69.287	ENSMGAG00000001822	DDX42	79	79.392	Meleagris_gallopavo
ENSIPUG00000013327	ddx42	79	76.620	ENSMAUG00000020774	-	83	83.654	Mesocricetus_auratus
ENSIPUG00000013327	ddx42	100	70.807	ENSMICG00000009952	DDX42	80	79.630	Microcebus_murinus
ENSIPUG00000013327	ddx42	100	69.681	ENSMOCG00000015504	Ddx42	81	79.657	Microtus_ochrogaster
ENSIPUG00000013327	ddx42	93	75.630	ENSMMOG00000016963	ddx42	84	77.312	Mola_mola
ENSIPUG00000013327	ddx42	53	82.180	ENSMODG00000009917	-	98	80.922	Monodelphis_domestica
ENSIPUG00000013327	ddx42	100	78.486	ENSMALG00000007800	ddx42	100	76.965	Monopterus_albus
ENSIPUG00000013327	ddx42	100	69.506	MGP_CAROLIEiJ_G0017314	Ddx42	80	79.789	Mus_caroli
ENSIPUG00000013327	ddx42	100	69.777	ENSMUSG00000020705	Ddx42	80	79.789	Mus_musculus
ENSIPUG00000013327	ddx42	78	81.571	MGP_PahariEiJ_G0018444	-	98	80.714	Mus_pahari
ENSIPUG00000013327	ddx42	100	69.611	MGP_SPRETEiJ_G0018158	Ddx42	80	79.921	Mus_spretus
ENSIPUG00000013327	ddx42	100	68.789	ENSMPUG00000014921	DDX42	79	79.657	Mustela_putorius_furo
ENSIPUG00000013327	ddx42	100	68.351	ENSMLUG00000011645	DDX42	79	79.524	Myotis_lucifugus
ENSIPUG00000013327	ddx42	100	71.199	ENSNGAG00000021897	Ddx42	81	79.921	Nannospalax_galili
ENSIPUG00000013327	ddx42	93	80.751	ENSNBRG00000004466	ddx42	100	77.633	Neolamprologus_brichardi
ENSIPUG00000013327	ddx42	100	70.626	ENSNLEG00000004248	DDX42	89	83.628	Nomascus_leucogenys
ENSIPUG00000013327	ddx42	75	71.134	ENSMEUG00000013227	-	71	71.134	Notamacropus_eugenii
ENSIPUG00000013327	ddx42	100	69.620	ENSOPRG00000014960	DDX42	80	79.657	Ochotona_princeps
ENSIPUG00000013327	ddx42	100	67.405	ENSODEG00000007810	DDX42	80	75.694	Octodon_degus
ENSIPUG00000013327	ddx42	93	82.277	ENSONIG00000000734	ddx42	100	79.262	Oreochromis_niloticus
ENSIPUG00000013327	ddx42	60	82.037	ENSOANG00000000265	DDX42	100	82.037	Ornithorhynchus_anatinus
ENSIPUG00000013327	ddx42	95	71.987	ENSOCUG00000004304	DDX42	74	79.789	Oryctolagus_cuniculus
ENSIPUG00000013327	ddx42	100	77.287	ENSORLG00000002395	ddx42	100	75.835	Oryzias_latipes
ENSIPUG00000013327	ddx42	100	77.097	ENSORLG00020011621	ddx42	100	76.144	Oryzias_latipes_hni
ENSIPUG00000013327	ddx42	100	76.882	ENSORLG00015004487	ddx42	100	76.035	Oryzias_latipes_hsok
ENSIPUG00000013327	ddx42	100	78.017	ENSOMEG00000020093	ddx42	100	78.275	Oryzias_melastigma
ENSIPUG00000013327	ddx42	100	69.811	ENSOGAG00000006872	DDX42	80	79.762	Otolemur_garnettii
ENSIPUG00000013327	ddx42	100	69.087	ENSOARG00000013540	DDX42	79	80.185	Ovis_aries
ENSIPUG00000013327	ddx42	100	69.958	ENSPPAG00000007496	DDX42	87	83.819	Pan_paniscus
ENSIPUG00000013327	ddx42	100	69.223	ENSPPRG00000002740	DDX42	80	79.657	Panthera_pardus
ENSIPUG00000013327	ddx42	100	69.118	ENSPTIG00000009932	DDX42	80	79.657	Panthera_tigris_altaica
ENSIPUG00000013327	ddx42	100	69.958	ENSPTRG00000009523	DDX42	87	83.819	Pan_troglodytes
ENSIPUG00000013327	ddx42	100	70.137	ENSPANG00000020990	DDX42	82	83.360	Papio_anubis
ENSIPUG00000013327	ddx42	100	79.070	ENSPKIG00000002901	ddx42	100	77.363	Paramormyrops_kingsleyae
ENSIPUG00000013327	ddx42	88	78.018	ENSPSIG00000010289	DDX42	91	79.392	Pelodiscus_sinensis
ENSIPUG00000013327	ddx42	100	73.529	ENSPMGG00000009323	ddx42	100	72.717	Periophthalmus_magnuspinnatus
ENSIPUG00000013327	ddx42	100	70.074	ENSPEMG00000006755	Ddx42	80	80.000	Peromyscus_maniculatus_bairdii
ENSIPUG00000013327	ddx42	84	71.336	ENSPMAG00000005580	ddx42	99	70.779	Petromyzon_marinus
ENSIPUG00000013327	ddx42	100	69.833	ENSPCIG00000009093	DDX42	79	79.657	Phascolarctos_cinereus
ENSIPUG00000013327	ddx42	100	77.110	ENSPFOG00000014104	ddx42	100	77.316	Poecilia_formosa
ENSIPUG00000013327	ddx42	100	76.899	ENSPLAG00000010522	ddx42	100	76.997	Poecilia_latipinna
ENSIPUG00000013327	ddx42	100	76.385	ENSPMEG00000010744	ddx42	100	76.663	Poecilia_mexicana
ENSIPUG00000013327	ddx42	100	75.311	ENSPREG00000009926	ddx42	100	75.288	Poecilia_reticulata
ENSIPUG00000013327	ddx42	100	67.366	ENSPPYG00000008531	DDX42	79	77.851	Pongo_abelii
ENSIPUG00000013327	ddx42	92	65.000	ENSPCAG00000002474	DDX42	78	74.671	Procavia_capensis
ENSIPUG00000013327	ddx42	100	61.301	ENSPCOG00000001559	DDX42	86	76.412	Propithecus_coquereli
ENSIPUG00000013327	ddx42	100	68.254	ENSPVAG00000000160	DDX42	79	78.447	Pteropus_vampyrus
ENSIPUG00000013327	ddx42	76	80.687	ENSPNYG00000013954	ddx42	97	77.214	Pundamilia_nyererei
ENSIPUG00000013327	ddx42	100	79.936	ENSPNAG00000017352	ddx42	100	83.262	Pygocentrus_nattereri
ENSIPUG00000013327	ddx42	100	69.401	ENSRNOG00000009474	Ddx42	80	79.657	Rattus_norvegicus
ENSIPUG00000013327	ddx42	100	70.032	ENSRBIG00000004781	DDX42	89	83.706	Rhinopithecus_bieti
ENSIPUG00000013327	ddx42	100	70.032	ENSRROG00000029794	DDX42	81	79.894	Rhinopithecus_roxellana
ENSIPUG00000013327	ddx42	100	70.789	ENSSBOG00000029624	DDX42	87	83.628	Saimiri_boliviensis_boliviensis
ENSIPUG00000013327	ddx42	100	69.634	ENSSHAG00000012896	-	79	79.524	Sarcophilus_harrisii
ENSIPUG00000013327	ddx42	70	48.042	ENSSHAG00000007919	-	69	56.723	Sarcophilus_harrisii
ENSIPUG00000013327	ddx42	87	85.515	ENSSFOG00015014064	ddx42	83	85.006	Scleropages_formosus
ENSIPUG00000013327	ddx42	100	77.681	ENSSMAG00000009077	ddx42	100	77.036	Scophthalmus_maximus
ENSIPUG00000013327	ddx42	100	76.997	ENSSDUG00000022221	ddx42	100	77.381	Seriola_dumerili
ENSIPUG00000013327	ddx42	100	76.667	ENSSLDG00000018483	ddx42	100	77.049	Seriola_lalandi_dorsalis
ENSIPUG00000013327	ddx42	100	69.515	ENSSARG00000009847	DDX42	80	79.603	Sorex_araneus
ENSIPUG00000013327	ddx42	100	70.414	ENSSPUG00000018806	DDX42	100	68.393	Sphenodon_punctatus
ENSIPUG00000013327	ddx42	93	81.786	ENSSPAG00000013055	ddx42	100	77.922	Stegastes_partitus
ENSIPUG00000013327	ddx42	84	69.004	ENSSSCG00000017289	DDX42	73	83.967	Sus_scrofa
ENSIPUG00000013327	ddx42	100	70.626	ENSTGUG00000001931	DDX42	80	79.156	Taeniopygia_guttata
ENSIPUG00000013327	ddx42	100	76.999	ENSTRUG00000010711	ddx42	99	83.151	Takifugu_rubripes
ENSIPUG00000013327	ddx42	85	75.393	ENSTBEG00000010159	DDX42	98	75.033	Tupaia_belangeri
ENSIPUG00000013327	ddx42	100	69.662	ENSTTRG00000006962	DDX42	80	79.921	Tursiops_truncatus
ENSIPUG00000013327	ddx42	100	70.253	ENSUAMG00000007321	DDX42	80	79.657	Ursus_americanus
ENSIPUG00000013327	ddx42	100	70.233	ENSUMAG00000017438	DDX42	80	79.392	Ursus_maritimus
ENSIPUG00000013327	ddx42	93	67.516	ENSVPAG00000009633	DDX42	73	76.481	Vicugna_pacos
ENSIPUG00000013327	ddx42	100	69.013	ENSVVUG00000006095	DDX42	80	79.657	Vulpes_vulpes
ENSIPUG00000013327	ddx42	100	69.738	ENSXETG00000003245	ddx42	79	79.576	Xenopus_tropicalis
ENSIPUG00000013327	ddx42	83	78.105	ENSXCOG00000017560	ddx42	97	80.577	Xiphophorus_couchianus
ENSIPUG00000013327	ddx42	100	77.646	ENSXMAG00000008138	ddx42	100	78.907	Xiphophorus_maculatus