EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000013347 (Gene tree)
Gene ID: 100528840
Gene Symbol: polr3f
Alias: rpc6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5035 bases
Position: chr27:16824301-16829335
Accession: 100528840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019750	RNA_pol_Rpc34	PF05158.12	2e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020606	-	2799	-	ENSIPUP00000019750	314 (aa)	-	E3TGN0

Gene Model

Click here to download ENSIPUG00000013347's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG
ipu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013347	polr3f	99	87.781	ENSG00000132664	POLR3F	98	87.781	Homo_sapiens
ENSIPUG00000013347	polr3f	100	90.823	ENSAPOG00000008271	polr3f	100	90.823	Acanthochromis_polyacanthus
ENSIPUG00000013347	polr3f	99	87.460	ENSAMEG00000005222	POLR3F	98	87.460	Ailuropoda_melanoleuca
ENSIPUG00000013347	polr3f	100	86.306	ENSACIG00000006705	polr3f	100	86.306	Amphilophus_citrinellus
ENSIPUG00000013347	polr3f	100	90.823	ENSAOCG00000000687	polr3f	100	90.823	Amphiprion_ocellaris
ENSIPUG00000013347	polr3f	100	90.506	ENSAPEG00000015263	polr3f	100	90.506	Amphiprion_percula
ENSIPUG00000013347	polr3f	88	93.818	ENSATEG00000015539	polr3f	100	93.818	Anabas_testudineus
ENSIPUG00000013347	polr3f	88	90.545	ENSAPLG00000005533	POLR3F	100	90.545	Anas_platyrhynchos
ENSIPUG00000013347	polr3f	98	86.084	ENSACAG00000014293	POLR3F	99	86.084	Anolis_carolinensis
ENSIPUG00000013347	polr3f	99	88.103	ENSANAG00000026726	POLR3F	98	88.103	Aotus_nancymaae
ENSIPUG00000013347	polr3f	100	92.089	ENSACLG00000003615	polr3f	100	92.089	Astatotilapia_calliptera
ENSIPUG00000013347	polr3f	100	95.860	ENSAMXG00000036020	polr3f	100	95.860	Astyanax_mexicanus
ENSIPUG00000013347	polr3f	99	87.138	ENSBTAG00000008825	POLR3F	98	87.138	Bos_taurus
ENSIPUG00000013347	polr3f	98	33.117	WBGene00021112	W09C3.4	98	33.117	Caenorhabditis_elegans
ENSIPUG00000013347	polr3f	99	88.103	ENSCJAG00000005159	POLR3F	98	88.103	Callithrix_jacchus
ENSIPUG00000013347	polr3f	99	87.138	ENSCAFG00000005420	POLR3F	98	87.138	Canis_familiaris
ENSIPUG00000013347	polr3f	99	87.138	ENSCAFG00020027500	POLR3F	98	87.138	Canis_lupus_dingo
ENSIPUG00000013347	polr3f	99	87.138	ENSCHIG00000014743	POLR3F	98	87.138	Capra_hircus
ENSIPUG00000013347	polr3f	100	86.392	ENSTSYG00000004207	POLR3F	100	86.392	Carlito_syrichta
ENSIPUG00000013347	polr3f	94	47.635	ENSCAPG00000008423	POLR3F	100	47.635	Cavia_aperea
ENSIPUG00000013347	polr3f	100	86.392	ENSCPOG00000002400	POLR3F	100	86.392	Cavia_porcellus
ENSIPUG00000013347	polr3f	99	78.135	ENSCCAG00000021800	POLR3F	98	78.135	Cebus_capucinus
ENSIPUG00000013347	polr3f	99	87.460	ENSCATG00000019507	POLR3F	98	87.460	Cercocebus_atys
ENSIPUG00000013347	polr3f	100	86.709	ENSCLAG00000016296	POLR3F	100	86.709	Chinchilla_lanigera
ENSIPUG00000013347	polr3f	99	87.460	ENSCSAG00000011513	POLR3F	98	87.460	Chlorocebus_sabaeus
ENSIPUG00000013347	polr3f	72	87.640	ENSCHOG00000013268	POLR3F	72	87.640	Choloepus_hoffmanni
ENSIPUG00000013347	polr3f	88	89.818	ENSCPBG00000023473	POLR3F	100	89.818	Chrysemys_picta_bellii
ENSIPUG00000013347	polr3f	99	60.191	ENSCING00000001212	-	99	60.191	Ciona_intestinalis
ENSIPUG00000013347	polr3f	71	60.538	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSIPUG00000013347	polr3f	92	86.598	ENSCANG00000037390	POLR3F	100	86.598	Colobus_angolensis_palliatus
ENSIPUG00000013347	polr3f	99	87.138	ENSCGRG00001002032	Polr3f	98	87.138	Cricetulus_griseus_chok1gshd
ENSIPUG00000013347	polr3f	99	87.138	ENSCGRG00000010852	Polr3f	98	87.138	Cricetulus_griseus_crigri
ENSIPUG00000013347	polr3f	100	88.291	ENSCSEG00000001247	polr3f	100	88.291	Cynoglossus_semilaevis
ENSIPUG00000013347	polr3f	100	89.873	ENSCVAG00000007611	polr3f	100	89.873	Cyprinodon_variegatus
ENSIPUG00000013347	polr3f	100	95.541	ENSDARG00000012572	polr3f	100	95.541	Danio_rerio
ENSIPUG00000013347	polr3f	100	84.177	ENSDNOG00000010719	POLR3F	100	84.177	Dasypus_novemcinctus
ENSIPUG00000013347	polr3f	99	87.460	ENSDORG00000016352	Polr3f	98	87.460	Dipodomys_ordii
ENSIPUG00000013347	polr3f	92	51.724	FBgn0038951	CG5380	96	51.724	Drosophila_melanogaster
ENSIPUG00000013347	polr3f	89	51.971	ENSETEG00000015485	-	99	51.971	Echinops_telfairi
ENSIPUG00000013347	polr3f	100	76.433	ENSEBUG00000006783	polr3f	100	76.433	Eptatretus_burgeri
ENSIPUG00000013347	polr3f	99	87.781	ENSEASG00005002022	POLR3F	98	87.781	Equus_asinus_asinus
ENSIPUG00000013347	polr3f	99	87.781	ENSECAG00000009920	POLR3F	98	87.781	Equus_caballus
ENSIPUG00000013347	polr3f	79	84.000	ENSEEUG00000000184	POLR3F	78	84.000	Erinaceus_europaeus
ENSIPUG00000013347	polr3f	100	93.312	ENSELUG00000001558	polr3f	100	93.312	Esox_lucius
ENSIPUG00000013347	polr3f	99	87.460	ENSFCAG00000013828	POLR3F	98	87.460	Felis_catus
ENSIPUG00000013347	polr3f	88	91.636	ENSFALG00000007623	POLR3F	100	91.636	Ficedula_albicollis
ENSIPUG00000013347	polr3f	100	86.392	ENSFDAG00000002528	POLR3F	100	86.392	Fukomys_damarensis
ENSIPUG00000013347	polr3f	100	88.608	ENSFHEG00000006450	polr3f	100	88.608	Fundulus_heteroclitus
ENSIPUG00000013347	polr3f	100	89.172	ENSGALG00000008749	POLR3F	100	89.172	Gallus_gallus
ENSIPUG00000013347	polr3f	100	90.190	ENSGAFG00000003698	polr3f	100	90.190	Gambusia_affinis
ENSIPUG00000013347	polr3f	100	87.580	ENSGAGG00000006151	POLR3F	100	87.580	Gopherus_agassizii
ENSIPUG00000013347	polr3f	99	87.781	ENSGGOG00000011543	POLR3F	98	87.781	Gorilla_gorilla
ENSIPUG00000013347	polr3f	100	92.405	ENSHBUG00000013806	polr3f	100	92.405	Haplochromis_burtoni
ENSIPUG00000013347	polr3f	100	86.392	ENSHGLG00000011867	POLR3F	100	86.392	Heterocephalus_glaber_female
ENSIPUG00000013347	polr3f	100	86.392	ENSHGLG00100012577	POLR3F	100	86.392	Heterocephalus_glaber_male
ENSIPUG00000013347	polr3f	100	80.063	ENSHCOG00000011751	polr3f	100	80.063	Hippocampus_comes
ENSIPUG00000013347	polr3f	99	87.460	ENSSTOG00000013588	POLR3F	98	87.460	Ictidomys_tridecemlineatus
ENSIPUG00000013347	polr3f	99	86.817	ENSJJAG00000017513	Polr3f	98	86.817	Jaculus_jaculus
ENSIPUG00000013347	polr3f	88	84.364	ENSKMAG00000016495	polr3f	100	84.364	Kryptolebias_marmoratus
ENSIPUG00000013347	polr3f	74	94.828	ENSLBEG00000011998	polr3f	100	94.828	Labrus_bergylta
ENSIPUG00000013347	polr3f	100	89.490	ENSLACG00000009371	POLR3F	100	89.490	Latimeria_chalumnae
ENSIPUG00000013347	polr3f	100	93.312	ENSLOCG00000015701	polr3f	100	93.312	Lepisosteus_oculatus
ENSIPUG00000013347	polr3f	99	87.138	ENSLAFG00000004929	POLR3F	98	87.138	Loxodonta_africana
ENSIPUG00000013347	polr3f	99	87.460	ENSMFAG00000002227	POLR3F	98	87.460	Macaca_fascicularis
ENSIPUG00000013347	polr3f	88	89.818	ENSMMUG00000004143	POLR3F	100	89.818	Macaca_mulatta
ENSIPUG00000013347	polr3f	99	87.460	ENSMNEG00000033404	POLR3F	98	87.460	Macaca_nemestrina
ENSIPUG00000013347	polr3f	99	87.460	ENSMLEG00000021905	POLR3F	98	87.460	Mandrillus_leucophaeus
ENSIPUG00000013347	polr3f	100	91.139	ENSMAMG00000017975	polr3f	100	91.139	Mastacembelus_armatus
ENSIPUG00000013347	polr3f	100	91.772	ENSMZEG00005015134	polr3f	100	91.772	Maylandia_zebra
ENSIPUG00000013347	polr3f	100	89.490	ENSMGAG00000006691	POLR3F	100	89.490	Meleagris_gallopavo
ENSIPUG00000013347	polr3f	99	86.817	ENSMAUG00000020176	Polr3f	98	86.817	Mesocricetus_auratus
ENSIPUG00000013347	polr3f	99	87.460	ENSMICG00000044519	POLR3F	98	87.460	Microcebus_murinus
ENSIPUG00000013347	polr3f	99	87.138	ENSMOCG00000018352	Polr3f	98	87.138	Microtus_ochrogaster
ENSIPUG00000013347	polr3f	94	91.919	ENSMMOG00000018477	polr3f	100	91.919	Mola_mola
ENSIPUG00000013347	polr3f	100	86.709	ENSMODG00000005624	POLR3F	100	86.709	Monodelphis_domestica
ENSIPUG00000013347	polr3f	100	91.456	ENSMALG00000006685	polr3f	100	91.456	Monopterus_albus
ENSIPUG00000013347	polr3f	99	86.495	MGP_CAROLIEiJ_G0024385	Polr3f	98	86.495	Mus_caroli
ENSIPUG00000013347	polr3f	99	86.495	ENSMUSG00000027427	Polr3f	98	86.495	Mus_musculus
ENSIPUG00000013347	polr3f	99	86.495	MGP_PahariEiJ_G0025829	Polr3f	98	86.495	Mus_pahari
ENSIPUG00000013347	polr3f	99	86.495	MGP_SPRETEiJ_G0025304	Polr3f	98	86.495	Mus_spretus
ENSIPUG00000013347	polr3f	100	66.769	ENSMPUG00000001252	-	100	66.769	Mustela_putorius_furo
ENSIPUG00000013347	polr3f	100	86.709	ENSMLUG00000014844	POLR3F	100	86.709	Myotis_lucifugus
ENSIPUG00000013347	polr3f	99	86.495	ENSNGAG00000010898	Polr3f	98	86.495	Nannospalax_galili
ENSIPUG00000013347	polr3f	100	92.089	ENSNBRG00000020796	polr3f	100	92.089	Neolamprologus_brichardi
ENSIPUG00000013347	polr3f	99	87.781	ENSNLEG00000009778	POLR3F	98	87.781	Nomascus_leucogenys
ENSIPUG00000013347	polr3f	94	82.712	ENSMEUG00000010320	POLR3F	100	82.712	Notamacropus_eugenii
ENSIPUG00000013347	polr3f	99	86.817	ENSOPRG00000003385	POLR3F	98	86.817	Ochotona_princeps
ENSIPUG00000013347	polr3f	100	87.025	ENSODEG00000011521	POLR3F	100	87.025	Octodon_degus
ENSIPUG00000013347	polr3f	100	90.823	ENSONIG00000006858	polr3f	100	90.823	Oreochromis_niloticus
ENSIPUG00000013347	polr3f	100	87.342	ENSOANG00000001253	POLR3F	100	87.342	Ornithorhynchus_anatinus
ENSIPUG00000013347	polr3f	99	87.781	ENSOCUG00000015067	POLR3F	98	87.781	Oryctolagus_cuniculus
ENSIPUG00000013347	polr3f	100	87.658	ENSORLG00000022412	polr3f	100	87.658	Oryzias_latipes
ENSIPUG00000013347	polr3f	100	87.658	ENSORLG00020021944	polr3f	100	87.658	Oryzias_latipes_hni
ENSIPUG00000013347	polr3f	99	86.495	ENSOGAG00000002916	POLR3F	98	86.495	Otolemur_garnettii
ENSIPUG00000013347	polr3f	100	52.215	ENSOARG00000008647	-	100	52.215	Ovis_aries
ENSIPUG00000013347	polr3f	99	87.138	ENSOARG00000000315	-	98	87.138	Ovis_aries
ENSIPUG00000013347	polr3f	99	87.781	ENSPPAG00000036681	POLR3F	98	87.781	Pan_paniscus
ENSIPUG00000013347	polr3f	99	87.460	ENSPPRG00000024604	POLR3F	98	87.460	Panthera_pardus
ENSIPUG00000013347	polr3f	99	87.460	ENSPTIG00000020292	POLR3F	98	87.460	Panthera_tigris_altaica
ENSIPUG00000013347	polr3f	99	87.781	ENSPTRG00000013287	POLR3F	98	87.781	Pan_troglodytes
ENSIPUG00000013347	polr3f	99	87.460	ENSPANG00000025015	POLR3F	98	87.460	Papio_anubis
ENSIPUG00000013347	polr3f	100	93.949	ENSPKIG00000004427	polr3f	100	93.949	Paramormyrops_kingsleyae
ENSIPUG00000013347	polr3f	88	91.273	ENSPSIG00000016613	POLR3F	100	91.273	Pelodiscus_sinensis
ENSIPUG00000013347	polr3f	100	56.426	ENSPMGG00000018350	polr3f	100	60.127	Periophthalmus_magnuspinnatus
ENSIPUG00000013347	polr3f	99	87.460	ENSPEMG00000006966	Polr3f	98	87.460	Peromyscus_maniculatus_bairdii
ENSIPUG00000013347	polr3f	100	80.573	ENSPMAG00000005530	polr3f	100	80.573	Petromyzon_marinus
ENSIPUG00000013347	polr3f	100	86.392	ENSPCIG00000000908	POLR3F	85	86.392	Phascolarctos_cinereus
ENSIPUG00000013347	polr3f	100	90.823	ENSPFOG00000018334	polr3f	100	90.823	Poecilia_formosa
ENSIPUG00000013347	polr3f	100	90.823	ENSPLAG00000021803	polr3f	100	90.823	Poecilia_latipinna
ENSIPUG00000013347	polr3f	100	90.823	ENSPMEG00000013150	polr3f	100	90.823	Poecilia_mexicana
ENSIPUG00000013347	polr3f	100	90.823	ENSPREG00000005278	polr3f	100	90.823	Poecilia_reticulata
ENSIPUG00000013347	polr3f	99	87.781	ENSPPYG00000010737	POLR3F	98	87.781	Pongo_abelii
ENSIPUG00000013347	polr3f	65	89.189	ENSPCAG00000004893	POLR3F	70	89.189	Procavia_capensis
ENSIPUG00000013347	polr3f	99	87.460	ENSPCOG00000004543	POLR3F	98	87.460	Propithecus_coquereli
ENSIPUG00000013347	polr3f	99	87.138	ENSPVAG00000000403	POLR3F	98	87.138	Pteropus_vampyrus
ENSIPUG00000013347	polr3f	100	92.405	ENSPNYG00000016276	polr3f	100	92.405	Pundamilia_nyererei
ENSIPUG00000013347	polr3f	100	97.134	ENSPNAG00000005164	polr3f	100	97.134	Pygocentrus_nattereri
ENSIPUG00000013347	polr3f	99	86.817	ENSRNOG00000007548	Polr3f	84	86.817	Rattus_norvegicus
ENSIPUG00000013347	polr3f	99	87.460	ENSRBIG00000021268	POLR3F	98	87.460	Rhinopithecus_bieti
ENSIPUG00000013347	polr3f	99	87.460	ENSRROG00000039911	POLR3F	98	87.460	Rhinopithecus_roxellana
ENSIPUG00000013347	polr3f	99	88.103	ENSSBOG00000018207	POLR3F	98	88.103	Saimiri_boliviensis_boliviensis
ENSIPUG00000013347	polr3f	100	69.085	ENSSHAG00000018160	POLR3F	100	69.085	Sarcophilus_harrisii
ENSIPUG00000013347	polr3f	100	94.268	ENSSFOG00015022433	polr3f	100	94.268	Scleropages_formosus
ENSIPUG00000013347	polr3f	100	88.291	ENSSMAG00000021029	polr3f	100	88.291	Scophthalmus_maximus
ENSIPUG00000013347	polr3f	100	79.747	ENSSDUG00000022435	polr3f	100	79.747	Seriola_dumerili
ENSIPUG00000013347	polr3f	100	90.506	ENSSLDG00000012761	polr3f	100	90.506	Seriola_lalandi_dorsalis
ENSIPUG00000013347	polr3f	100	78.797	ENSSARG00000006039	POLR3F	100	78.797	Sorex_araneus
ENSIPUG00000013347	polr3f	100	86.943	ENSSPUG00000001873	POLR3F	100	86.943	Sphenodon_punctatus
ENSIPUG00000013347	polr3f	100	82.911	ENSSPAG00000002092	polr3f	100	82.911	Stegastes_partitus
ENSIPUG00000013347	polr3f	99	87.138	ENSSSCG00000007095	POLR3F	100	91.810	Sus_scrofa
ENSIPUG00000013347	polr3f	100	89.172	ENSTGUG00000005839	POLR3F	100	89.172	Taeniopygia_guttata
ENSIPUG00000013347	polr3f	100	88.608	ENSTRUG00000012101	polr3f	100	88.608	Takifugu_rubripes
ENSIPUG00000013347	polr3f	100	87.342	ENSTNIG00000006456	polr3f	100	87.342	Tetraodon_nigroviridis
ENSIPUG00000013347	polr3f	99	71.061	ENSTBEG00000007921	POLR3F	98	71.061	Tupaia_belangeri
ENSIPUG00000013347	polr3f	99	87.138	ENSTTRG00000002580	POLR3F	98	87.138	Tursiops_truncatus
ENSIPUG00000013347	polr3f	53	88.554	ENSUAMG00000024166	POLR3F	100	88.554	Ursus_americanus
ENSIPUG00000013347	polr3f	99	87.138	ENSUMAG00000024944	POLR3F	98	87.138	Ursus_maritimus
ENSIPUG00000013347	polr3f	99	86.495	ENSVPAG00000009063	POLR3F	98	86.495	Vicugna_pacos
ENSIPUG00000013347	polr3f	99	87.138	ENSVVUG00000012925	POLR3F	98	87.138	Vulpes_vulpes
ENSIPUG00000013347	polr3f	100	87.261	ENSXETG00000024898	polr3f	100	87.261	Xenopus_tropicalis
ENSIPUG00000013347	polr3f	88	92.727	ENSXCOG00000010301	polr3f	100	92.727	Xiphophorus_couchianus
ENSIPUG00000013347	polr3f	100	90.506	ENSXMAG00000004604	polr3f	100	90.506	Xiphophorus_maculatus