EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000013409 (Gene tree)
Gene ID: 108260407
Gene Symbol: eral1
Alias: si:ch211-207c6.1
Full Name: Era like 12S mitochondrial rRNA chaperone 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 14563 bases
Position: chr28:12338066-12352628
Accession: 108260407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019791	GTP_EFTU	PF00009.27	1.7e-10	1	1
ENSIPUP00000019791	MMR_HSR1	PF01926.23	4.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020648	-	4736	XM_017460688	ENSIPUP00000019791	450 (aa)	XP_017316177	W5UEC9

Gene Model

Click here to download ENSIPUG00000013409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013409	eral1	85	51.958	ENSG00000132591	ERAL1	99	55.696	Homo_sapiens
ENSIPUG00000013409	eral1	99	56.926	ENSAPOG00000000093	eral1	99	56.926	Acanthochromis_polyacanthus
ENSIPUG00000013409	eral1	97	47.500	ENSAMEG00000004602	ERAL1	91	47.500	Ailuropoda_melanoleuca
ENSIPUG00000013409	eral1	99	58.758	ENSACIG00000011545	eral1	99	58.758	Amphilophus_citrinellus
ENSIPUG00000013409	eral1	99	58.079	ENSAOCG00000014398	eral1	99	58.079	Amphiprion_ocellaris
ENSIPUG00000013409	eral1	99	58.515	ENSAPEG00000015466	eral1	99	58.515	Amphiprion_percula
ENSIPUG00000013409	eral1	99	58.022	ENSATEG00000005857	eral1	99	58.022	Anabas_testudineus
ENSIPUG00000013409	eral1	77	54.032	ENSAPLG00000014894	ERAL1	100	54.032	Anas_platyrhynchos
ENSIPUG00000013409	eral1	85	50.390	ENSANAG00000022216	-	83	50.390	Aotus_nancymaae
ENSIPUG00000013409	eral1	52	48.148	ENSANAG00000020670	-	99	48.148	Aotus_nancymaae
ENSIPUG00000013409	eral1	99	58.681	ENSACLG00000006437	eral1	99	58.681	Astatotilapia_calliptera
ENSIPUG00000013409	eral1	99	65.188	ENSAMXG00000037957	eral1	99	65.410	Astyanax_mexicanus
ENSIPUG00000013409	eral1	82	54.620	ENSBTAG00000015639	ERAL1	79	54.620	Bos_taurus
ENSIPUG00000013409	eral1	85	51.538	ENSCJAG00000045605	ERAL1	83	51.538	Callithrix_jacchus
ENSIPUG00000013409	eral1	86	52.591	ENSCAFG00000018813	ERAL1	84	52.591	Canis_familiaris
ENSIPUG00000013409	eral1	86	52.591	ENSCAFG00020011718	ERAL1	84	52.591	Canis_lupus_dingo
ENSIPUG00000013409	eral1	82	55.435	ENSCHIG00000021850	ERAL1	79	55.435	Capra_hircus
ENSIPUG00000013409	eral1	85	50.785	ENSTSYG00000007492	ERAL1	83	50.785	Carlito_syrichta
ENSIPUG00000013409	eral1	96	46.712	ENSCPOG00000009576	ERAL1	95	46.712	Cavia_porcellus
ENSIPUG00000013409	eral1	85	51.948	ENSCCAG00000036226	-	83	51.948	Cebus_capucinus
ENSIPUG00000013409	eral1	55	53.175	ENSCCAG00000031032	-	97	50.000	Cebus_capucinus
ENSIPUG00000013409	eral1	82	53.261	ENSCATG00000041378	ERAL1	79	53.261	Cercocebus_atys
ENSIPUG00000013409	eral1	78	49.570	ENSCLAG00000004778	ERAL1	99	57.463	Chinchilla_lanigera
ENSIPUG00000013409	eral1	85	50.914	ENSCSAG00000007105	ERAL1	83	50.914	Chlorocebus_sabaeus
ENSIPUG00000013409	eral1	93	49.890	ENSCPBG00000020222	ERAL1	88	49.890	Chrysemys_picta_bellii
ENSIPUG00000013409	eral1	79	33.708	ENSCING00000003676	-	94	33.708	Ciona_intestinalis
ENSIPUG00000013409	eral1	85	51.697	ENSCANG00000028131	ERAL1	83	51.697	Colobus_angolensis_palliatus
ENSIPUG00000013409	eral1	86	49.741	ENSCGRG00001016601	Eral1	83	49.741	Cricetulus_griseus_chok1gshd
ENSIPUG00000013409	eral1	86	49.741	ENSCGRG00000002004	Eral1	83	49.741	Cricetulus_griseus_crigri
ENSIPUG00000013409	eral1	90	55.501	ENSCSEG00000016147	eral1	93	56.235	Cynoglossus_semilaevis
ENSIPUG00000013409	eral1	100	59.219	ENSCVAG00000013714	eral1	100	59.219	Cyprinodon_variegatus
ENSIPUG00000013409	eral1	99	58.747	ENSDARG00000059887	eral1	99	58.747	Danio_rerio
ENSIPUG00000013409	eral1	85	52.742	ENSDNOG00000044554	ERAL1	83	52.742	Dasypus_novemcinctus
ENSIPUG00000013409	eral1	86	50.000	ENSDORG00000011319	Eral1	84	50.000	Dipodomys_ordii
ENSIPUG00000013409	eral1	78	33.520	FBgn0038106	CG7488	86	32.961	Drosophila_melanogaster
ENSIPUG00000013409	eral1	60	50.360	ENSETEG00000011551	ERAL1	78	50.360	Echinops_telfairi
ENSIPUG00000013409	eral1	98	42.035	ENSEBUG00000004405	eral1	95	42.163	Eptatretus_burgeri
ENSIPUG00000013409	eral1	86	52.073	ENSEASG00005009864	ERAL1	84	52.073	Equus_asinus_asinus
ENSIPUG00000013409	eral1	86	52.455	ENSECAG00000013325	ERAL1	84	52.455	Equus_caballus
ENSIPUG00000013409	eral1	65	49.147	ENSEEUG00000005568	ERAL1	62	49.147	Erinaceus_europaeus
ENSIPUG00000013409	eral1	100	53.333	ENSELUG00000021860	eral1	100	53.333	Esox_lucius
ENSIPUG00000013409	eral1	86	51.813	ENSFCAG00000005232	ERAL1	84	51.813	Felis_catus
ENSIPUG00000013409	eral1	82	54.684	ENSFALG00000006357	ERAL1	98	54.684	Ficedula_albicollis
ENSIPUG00000013409	eral1	77	51.297	ENSFDAG00000001767	ERAL1	98	64.179	Fukomys_damarensis
ENSIPUG00000013409	eral1	100	56.710	ENSFHEG00000012028	eral1	100	56.710	Fundulus_heteroclitus
ENSIPUG00000013409	eral1	63	66.379	ENSGMOG00000014198	eral1	85	66.379	Gadus_morhua
ENSIPUG00000013409	eral1	82	53.133	ENSGALG00000003995	ERAL1	82	54.688	Gallus_gallus
ENSIPUG00000013409	eral1	99	58.531	ENSGAFG00000013837	eral1	99	58.531	Gambusia_affinis
ENSIPUG00000013409	eral1	80	62.222	ENSGACG00000020251	eral1	99	73.571	Gasterosteus_aculeatus
ENSIPUG00000013409	eral1	81	52.989	ENSGAGG00000023159	ERAL1	92	52.989	Gopherus_agassizii
ENSIPUG00000013409	eral1	66	49.832	ENSGGOG00000015953	ERAL1	75	49.832	Gorilla_gorilla
ENSIPUG00000013409	eral1	99	58.681	ENSHBUG00000022014	eral1	99	58.681	Haplochromis_burtoni
ENSIPUG00000013409	eral1	85	49.869	ENSHGLG00000009773	ERAL1	83	49.869	Heterocephalus_glaber_female
ENSIPUG00000013409	eral1	85	49.869	ENSHGLG00100018820	ERAL1	83	49.869	Heterocephalus_glaber_male
ENSIPUG00000013409	eral1	92	54.976	ENSHCOG00000009314	eral1	95	54.976	Hippocampus_comes
ENSIPUG00000013409	eral1	82	51.359	ENSSTOG00000003459	ERAL1	79	51.359	Ictidomys_tridecemlineatus
ENSIPUG00000013409	eral1	65	48.299	ENSJJAG00000014664	-	95	48.299	Jaculus_jaculus
ENSIPUG00000013409	eral1	99	56.140	ENSKMAG00000012520	eral1	99	56.140	Kryptolebias_marmoratus
ENSIPUG00000013409	eral1	99	57.081	ENSLBEG00000016447	eral1	99	57.081	Labrus_bergylta
ENSIPUG00000013409	eral1	100	48.971	ENSLACG00000012328	ERAL1	100	52.844	Latimeria_chalumnae
ENSIPUG00000013409	eral1	99	54.292	ENSLOCG00000003302	eral1	99	54.292	Lepisosteus_oculatus
ENSIPUG00000013409	eral1	81	52.877	ENSLAFG00000005438	ERAL1	79	52.446	Loxodonta_africana
ENSIPUG00000013409	eral1	85	51.958	ENSMFAG00000000501	ERAL1	83	51.958	Macaca_fascicularis
ENSIPUG00000013409	eral1	85	51.958	ENSMMUG00000002776	ERAL1	70	51.958	Macaca_mulatta
ENSIPUG00000013409	eral1	85	51.697	ENSMNEG00000039112	ERAL1	82	51.969	Macaca_nemestrina
ENSIPUG00000013409	eral1	82	53.261	ENSMLEG00000040246	ERAL1	79	53.261	Mandrillus_leucophaeus
ENSIPUG00000013409	eral1	99	57.330	ENSMAMG00000006623	eral1	99	57.330	Mastacembelus_armatus
ENSIPUG00000013409	eral1	99	58.681	ENSMZEG00005000255	eral1	99	58.681	Maylandia_zebra
ENSIPUG00000013409	eral1	79	53.525	ENSMGAG00000012769	ERAL1	97	53.525	Meleagris_gallopavo
ENSIPUG00000013409	eral1	66	46.980	ENSMAUG00000001516	Eral1	86	46.980	Mesocricetus_auratus
ENSIPUG00000013409	eral1	83	49.866	ENSMICG00000005345	ERAL1	80	49.866	Microcebus_murinus
ENSIPUG00000013409	eral1	86	50.000	ENSMOCG00000022786	Eral1	83	50.000	Microtus_ochrogaster
ENSIPUG00000013409	eral1	90	56.386	ENSMMOG00000005143	eral1	99	56.386	Mola_mola
ENSIPUG00000013409	eral1	97	45.249	ENSMODG00000019305	ERAL1	99	45.249	Monodelphis_domestica
ENSIPUG00000013409	eral1	91	57.767	ENSMALG00000013394	eral1	96	61.741	Monopterus_albus
ENSIPUG00000013409	eral1	86	50.646	MGP_CAROLIEiJ_G0016788	Eral1	84	50.646	Mus_caroli
ENSIPUG00000013409	eral1	86	50.904	ENSMUSG00000020832	Eral1	84	50.904	Mus_musculus
ENSIPUG00000013409	eral1	86	46.632	MGP_PahariEiJ_G0017925	Eral1	82	46.632	Mus_pahari
ENSIPUG00000013409	eral1	86	50.646	MGP_SPRETEiJ_G0017631	Eral1	84	50.646	Mus_spretus
ENSIPUG00000013409	eral1	86	50.777	ENSMPUG00000014146	ERAL1	84	50.777	Mustela_putorius_furo
ENSIPUG00000013409	eral1	86	50.773	ENSMLUG00000013467	ERAL1	84	50.773	Myotis_lucifugus
ENSIPUG00000013409	eral1	99	46.943	ENSNGAG00000019318	Eral1	84	51.163	Nannospalax_galili
ENSIPUG00000013409	eral1	99	58.057	ENSNBRG00000015799	eral1	99	58.057	Neolamprologus_brichardi
ENSIPUG00000013409	eral1	85	51.958	ENSNLEG00000002994	ERAL1	84	51.554	Nomascus_leucogenys
ENSIPUG00000013409	eral1	84	49.602	ENSMEUG00000015582	ERAL1	88	49.602	Notamacropus_eugenii
ENSIPUG00000013409	eral1	96	48.758	ENSOPRG00000014488	ERAL1	95	49.210	Ochotona_princeps
ENSIPUG00000013409	eral1	78	46.705	ENSODEG00000011337	ERAL1	99	50.746	Octodon_degus
ENSIPUG00000013409	eral1	90	61.916	ENSONIG00000012792	eral1	97	61.916	Oreochromis_niloticus
ENSIPUG00000013409	eral1	85	51.175	ENSOCUG00000005572	ERAL1	83	51.175	Oryctolagus_cuniculus
ENSIPUG00000013409	eral1	99	57.016	ENSORLG00000011440	eral1	98	57.016	Oryzias_latipes
ENSIPUG00000013409	eral1	100	57.048	ENSORLG00020018272	eral1	100	57.048	Oryzias_latipes_hni
ENSIPUG00000013409	eral1	100	57.048	ENSORLG00015001511	eral1	100	57.048	Oryzias_latipes_hsok
ENSIPUG00000013409	eral1	99	56.920	ENSOMEG00000007662	eral1	97	70.940	Oryzias_melastigma
ENSIPUG00000013409	eral1	86	51.036	ENSOGAG00000011082	ERAL1	84	51.036	Otolemur_garnettii
ENSIPUG00000013409	eral1	82	55.163	ENSOARG00000004456	ERAL1	73	55.163	Ovis_aries
ENSIPUG00000013409	eral1	62	48.014	ENSPPAG00000033864	-	91	50.980	Pan_paniscus
ENSIPUG00000013409	eral1	86	51.813	ENSPPRG00000006097	ERAL1	84	51.813	Panthera_pardus
ENSIPUG00000013409	eral1	86	51.813	ENSPTIG00000013961	ERAL1	84	51.813	Panthera_tigris_altaica
ENSIPUG00000013409	eral1	85	52.219	ENSPTRG00000008938	ERAL1	83	52.219	Pan_troglodytes
ENSIPUG00000013409	eral1	82	52.989	ENSPANG00000023400	ERAL1	79	52.989	Papio_anubis
ENSIPUG00000013409	eral1	100	53.846	ENSPKIG00000016278	eral1	99	53.846	Paramormyrops_kingsleyae
ENSIPUG00000013409	eral1	89	49.083	ENSPSIG00000007018	ERAL1	99	49.083	Pelodiscus_sinensis
ENSIPUG00000013409	eral1	91	59.564	ENSPMGG00000007387	eral1	94	59.564	Periophthalmus_magnuspinnatus
ENSIPUG00000013409	eral1	86	50.388	ENSPEMG00000000668	Eral1	84	50.388	Peromyscus_maniculatus_bairdii
ENSIPUG00000013409	eral1	78	46.927	ENSPMAG00000008076	eral1	98	46.927	Petromyzon_marinus
ENSIPUG00000013409	eral1	90	61.928	ENSPFOG00000018592	eral1	99	61.928	Poecilia_formosa
ENSIPUG00000013409	eral1	94	60.277	ENSPLAG00000022753	eral1	92	60.277	Poecilia_latipinna
ENSIPUG00000013409	eral1	94	60.325	ENSPMEG00000018207	eral1	92	60.325	Poecilia_mexicana
ENSIPUG00000013409	eral1	94	60.277	ENSPREG00000006895	eral1	95	60.277	Poecilia_reticulata
ENSIPUG00000013409	eral1	85	52.480	ENSPPYG00000008113	ERAL1	83	52.480	Pongo_abelii
ENSIPUG00000013409	eral1	82	52.446	ENSPCAG00000003013	ERAL1	80	52.446	Procavia_capensis
ENSIPUG00000013409	eral1	85	50.521	ENSPCOG00000023179	ERAL1	83	50.521	Propithecus_coquereli
ENSIPUG00000013409	eral1	82	53.100	ENSPVAG00000001796	ERAL1	80	53.100	Pteropus_vampyrus
ENSIPUG00000013409	eral1	99	58.462	ENSPNYG00000017330	eral1	99	58.462	Pundamilia_nyererei
ENSIPUG00000013409	eral1	100	69.690	ENSPNAG00000009960	eral1	100	69.690	Pygocentrus_nattereri
ENSIPUG00000013409	eral1	86	51.163	ENSRNOG00000010673	Eral1	83	51.163	Rattus_norvegicus
ENSIPUG00000013409	eral1	85	51.697	ENSRBIG00000006150	ERAL1	83	51.697	Rhinopithecus_bieti
ENSIPUG00000013409	eral1	85	51.958	ENSRROG00000026778	ERAL1	83	51.958	Rhinopithecus_roxellana
ENSIPUG00000013409	eral1	78	53.541	ENSSHAG00000014995	ERAL1	89	53.541	Sarcophilus_harrisii
ENSIPUG00000013409	eral1	80	60.976	ENSSFOG00015015511	eral1	91	60.976	Scleropages_formosus
ENSIPUG00000013409	eral1	96	58.409	ENSSMAG00000000305	eral1	96	58.409	Scophthalmus_maximus
ENSIPUG00000013409	eral1	99	58.658	ENSSDUG00000017121	eral1	99	58.658	Seriola_dumerili
ENSIPUG00000013409	eral1	99	58.405	ENSSLDG00000019349	eral1	99	58.405	Seriola_lalandi_dorsalis
ENSIPUG00000013409	eral1	86	50.000	ENSSARG00000010129	ERAL1	84	50.000	Sorex_araneus
ENSIPUG00000013409	eral1	83	52.941	ENSSPUG00000005676	ERAL1	99	61.538	Sphenodon_punctatus
ENSIPUG00000013409	eral1	99	58.643	ENSSPAG00000018370	eral1	99	58.643	Stegastes_partitus
ENSIPUG00000013409	eral1	82	53.533	ENSSSCG00000017776	ERAL1	83	52.219	Sus_scrofa
ENSIPUG00000013409	eral1	81	46.512	ENSTGUG00000006210	ERAL1	99	46.512	Taeniopygia_guttata
ENSIPUG00000013409	eral1	99	53.659	ENSTRUG00000000660	eral1	99	53.659	Takifugu_rubripes
ENSIPUG00000013409	eral1	76	53.699	ENSTNIG00000008531	eral1	98	74.510	Tetraodon_nigroviridis
ENSIPUG00000013409	eral1	82	46.757	ENSTBEG00000007215	ERAL1	79	46.757	Tupaia_belangeri
ENSIPUG00000013409	eral1	82	54.891	ENSTTRG00000004107	ERAL1	79	54.891	Tursiops_truncatus
ENSIPUG00000013409	eral1	97	47.500	ENSUAMG00000015904	ERAL1	91	47.500	Ursus_americanus
ENSIPUG00000013409	eral1	97	47.500	ENSUMAG00000011679	ERAL1	91	47.500	Ursus_maritimus
ENSIPUG00000013409	eral1	67	49.835	ENSVPAG00000006626	ERAL1	76	49.835	Vicugna_pacos
ENSIPUG00000013409	eral1	86	53.230	ENSVVUG00000017651	ERAL1	84	53.230	Vulpes_vulpes
ENSIPUG00000013409	eral1	82	56.098	ENSXETG00000019633	eral1	92	56.098	Xenopus_tropicalis
ENSIPUG00000013409	eral1	92	60.377	ENSXCOG00000005705	eral1	92	60.047	Xiphophorus_couchianus
ENSIPUG00000013409	eral1	99	57.609	ENSXMAG00000005455	eral1	99	57.328	Xiphophorus_maculatus