EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000013414 (Gene tree)
Gene ID: 108280759
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 9423 bases
Position: chr20:20829117-20838539
Accession: 108280759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019766	zf-C2H2	PF00096.26	4.1e-29	1	5
ENSIPUP00000019766	zf-C2H2	PF00096.26	4.1e-29	2	5
ENSIPUP00000019766	zf-C2H2	PF00096.26	4.1e-29	3	5
ENSIPUP00000019766	zf-C2H2	PF00096.26	4.1e-29	4	5
ENSIPUP00000019766	zf-C2H2	PF00096.26	4.1e-29	5	5
ENSIPUP00000019785	zf-C2H2	PF00096.26	5.6e-29	1	5
ENSIPUP00000019785	zf-C2H2	PF00096.26	5.6e-29	2	5
ENSIPUP00000019785	zf-C2H2	PF00096.26	5.6e-29	3	5
ENSIPUP00000019785	zf-C2H2	PF00096.26	5.6e-29	4	5
ENSIPUP00000019785	zf-C2H2	PF00096.26	5.6e-29	5	5
ENSIPUP00000019766	zf-met	PF12874.7	1.4e-05	1	2
ENSIPUP00000019766	zf-met	PF12874.7	1.4e-05	2	2
ENSIPUP00000019785	zf-met	PF12874.7	1.9e-05	1	2
ENSIPUP00000019785	zf-met	PF12874.7	1.9e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020642	GFI1 (1 of many)-202	2709	XM_017496132	ENSIPUP00000019785	410 (aa)	XP_017351621	A0A2D0T9R8
ENSIPUT00000020623	GFI1 (1 of many)-201	2546	XM_017496135	ENSIPUP00000019766	393 (aa)	XP_017351624	A0A2D0T9S6

Gene Model

Click here to download ENSIPUG00000013414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000013414	GFI1	65	46.479	ENSIPUG00000022751	-	98	46.479
ENSIPUG00000013414	GFI1	53	46.154	ENSIPUG00000015468	-	89	44.242
ENSIPUG00000013414	GFI1	72	45.536	ENSIPUG00000015294	-	75	45.324
ENSIPUG00000013414	GFI1	63	44.048	ENSIPUG00000015400	-	99	44.578
ENSIPUG00000013414	GFI1	68	41.071	ENSIPUG00000015233	-	78	41.071
ENSIPUG00000013414	GFI1	67	44.025	ENSIPUG00000006936	-	93	47.020
ENSIPUG00000013414	GFI1	100	61.750	ENSIPUG00000010071	gfi1ab	87	61.404
ENSIPUG00000013414	GFI1	66	45.763	ENSIPUG00000018102	znf646	59	39.450
ENSIPUG00000013414	GFI1	100	48.662	ENSIPUG00000012769	gfi1b	62	74.038
ENSIPUG00000013414	GFI1	72	41.667	ENSIPUG00000023761	-	62	41.667
ENSIPUG00000013414	GFI1	65	46.667	ENSIPUG00000023688	-	97	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013414	GFI1	100	57.309	ENSG00000162676	GFI1	100	56.613	Homo_sapiens
ENSIPUG00000013414	GFI1	100	61.364	ENSAPOG00000015189	gfi1ab	100	61.250	Acanthochromis_polyacanthus
ENSIPUG00000013414	GFI1	100	61.097	ENSACIG00000016354	gfi1ab	100	61.097	Amphilophus_citrinellus
ENSIPUG00000013414	GFI1	100	53.518	ENSAOCG00000008339	gfi1ab	100	53.465	Amphiprion_ocellaris
ENSIPUG00000013414	GFI1	100	61.965	ENSAPEG00000023870	gfi1ab	100	61.965	Amphiprion_percula
ENSIPUG00000013414	GFI1	100	59.548	ENSATEG00000009167	gfi1ab	89	59.548	Anabas_testudineus
ENSIPUG00000013414	GFI1	86	61.254	ENSAPLG00000015700	GFI1	99	61.254	Anas_platyrhynchos
ENSIPUG00000013414	GFI1	100	58.924	ENSACAG00000004498	GFI1	100	58.924	Anolis_carolinensis
ENSIPUG00000013414	GFI1	100	56.335	ENSANAG00000019656	GFI1	100	58.216	Aotus_nancymaae
ENSIPUG00000013414	GFI1	100	62.624	ENSACLG00000026458	gfi1ab	93	62.624	Astatotilapia_calliptera
ENSIPUG00000013414	GFI1	100	59.500	ENSAMXG00000039600	gfi1ab	100	59.500	Astyanax_mexicanus
ENSIPUG00000013414	GFI1	100	72.917	ENSAMXG00000006669	GFI1	100	72.917	Astyanax_mexicanus
ENSIPUG00000013414	GFI1	100	58.275	ENSBTAG00000016723	GFI1	100	58.042	Bos_taurus
ENSIPUG00000013414	GFI1	100	57.773	ENSCJAG00000017609	GFI1	100	57.541	Callithrix_jacchus
ENSIPUG00000013414	GFI1	100	57.773	ENSCAFG00000020155	GFI1	100	57.077	Canis_familiaris
ENSIPUG00000013414	GFI1	100	57.773	ENSCAFG00020013371	GFI1	88	57.077	Canis_lupus_dingo
ENSIPUG00000013414	GFI1	100	57.576	ENSCHIG00000016135	GFI1	100	58.216	Capra_hircus
ENSIPUG00000013414	GFI1	100	58.237	ENSCPOG00000011727	GFI1	100	59.390	Cavia_porcellus
ENSIPUG00000013414	GFI1	100	57.442	ENSCCAG00000036072	GFI1	100	57.442	Cebus_capucinus
ENSIPUG00000013414	GFI1	100	58.005	ENSCATG00000037873	GFI1	100	57.309	Cercocebus_atys
ENSIPUG00000013414	GFI1	93	83.333	ENSCLAG00000005915	GFI1	83	83.333	Chinchilla_lanigera
ENSIPUG00000013414	GFI1	85	51.743	ENSCSAG00000001469	GFI1	100	50.938	Chlorocebus_sabaeus
ENSIPUG00000013414	GFI1	56	96.296	ENSCPBG00000015742	-	100	96.296	Chrysemys_picta_bellii
ENSIPUG00000013414	GFI1	100	57.541	ENSCANG00000034077	GFI1	100	57.981	Colobus_angolensis_palliatus
ENSIPUG00000013414	GFI1	100	56.613	ENSCGRG00001015432	Gfi1	100	57.309	Cricetulus_griseus_chok1gshd
ENSIPUG00000013414	GFI1	56	96.296	ENSCGRG00000013485	-	100	96.296	Cricetulus_griseus_crigri
ENSIPUG00000013414	GFI1	100	61.000	ENSCSEG00000017729	GFI1	100	61.000	Cynoglossus_semilaevis
ENSIPUG00000013414	GFI1	100	56.934	ENSCVAG00000004930	GFI1	100	57.831	Cyprinodon_variegatus
ENSIPUG00000013414	GFI1	100	60.253	ENSCVAG00000011828	gfi1ab	100	60.253	Cyprinodon_variegatus
ENSIPUG00000013414	GFI1	100	62.843	ENSDARG00000044457	gfi1ab	100	62.843	Danio_rerio
ENSIPUG00000013414	GFI1	100	56.944	ENSDNOG00000000782	GFI1	97	58.782	Dasypus_novemcinctus
ENSIPUG00000013414	GFI1	56	96.296	ENSDORG00000023443	-	100	96.296	Dipodomys_ordii
ENSIPUG00000013414	GFI1	100	58.782	ENSEASG00005015509	GFI1	86	58.782	Equus_asinus_asinus
ENSIPUG00000013414	GFI1	91	49.746	ENSECAG00000006647	GFI1	92	49.746	Equus_caballus
ENSIPUG00000013414	GFI1	100	57.995	ENSEEUG00000000198	GFI1	100	57.995	Erinaceus_europaeus
ENSIPUG00000013414	GFI1	100	63.210	ENSELUG00000003015	gfi1ab	99	63.210	Esox_lucius
ENSIPUG00000013414	GFI1	100	63.750	ENSELUG00000019033	GFI1	100	63.750	Esox_lucius
ENSIPUG00000013414	GFI1	100	57.773	ENSFCAG00000005914	GFI1	100	57.077	Felis_catus
ENSIPUG00000013414	GFI1	56	96.296	ENSFDAG00000019296	-	100	96.296	Fukomys_damarensis
ENSIPUG00000013414	GFI1	100	60.349	ENSFHEG00000010997	gfi1ab	100	60.349	Fundulus_heteroclitus
ENSIPUG00000013414	GFI1	100	56.448	ENSFHEG00000000341	GFI1	100	57.908	Fundulus_heteroclitus
ENSIPUG00000013414	GFI1	100	60.199	ENSGMOG00000007737	gfi1ab	100	60.199	Gadus_morhua
ENSIPUG00000013414	GFI1	100	59.611	ENSGALG00000043650	GFI1	100	59.611	Gallus_gallus
ENSIPUG00000013414	GFI1	100	59.268	ENSGAFG00000016637	gfi1ab	100	59.268	Gambusia_affinis
ENSIPUG00000013414	GFI1	100	57.143	ENSGAFG00000018063	GFI1	100	59.169	Gambusia_affinis
ENSIPUG00000013414	GFI1	100	61.347	ENSGACG00000004257	gfi1ab	97	61.347	Gasterosteus_aculeatus
ENSIPUG00000013414	GFI1	56	96.296	ENSGAGG00000015899	GFI1	100	96.296	Gopherus_agassizii
ENSIPUG00000013414	GFI1	100	57.309	ENSGGOG00000005320	GFI1	100	56.613	Gorilla_gorilla
ENSIPUG00000013414	GFI1	100	62.376	ENSHBUG00000011969	gfi1ab	100	62.376	Haplochromis_burtoni
ENSIPUG00000013414	GFI1	100	58.019	ENSHGLG00000008020	GFI1	100	57.783	Heterocephalus_glaber_female
ENSIPUG00000013414	GFI1	100	58.019	ENSHGLG00100000610	GFI1	100	57.783	Heterocephalus_glaber_male
ENSIPUG00000013414	GFI1	100	58.025	ENSHCOG00000019555	GFI1	77	81.373	Hippocampus_comes
ENSIPUG00000013414	GFI1	100	54.940	ENSHCOG00000008590	gfi1ab	100	54.940	Hippocampus_comes
ENSIPUG00000013414	GFI1	100	57.944	ENSSTOG00000014583	GFI1	100	57.944	Ictidomys_tridecemlineatus
ENSIPUG00000013414	GFI1	100	59.413	ENSKMAG00000003810	gfi1ab	100	59.413	Kryptolebias_marmoratus
ENSIPUG00000013414	GFI1	100	61.084	ENSLBEG00000027776	gfi1ab	100	61.881	Labrus_bergylta
ENSIPUG00000013414	GFI1	99	46.482	ENSLACG00000017590	-	99	46.193	Latimeria_chalumnae
ENSIPUG00000013414	GFI1	100	63.547	ENSLACG00000013362	GFI1	98	63.793	Latimeria_chalumnae
ENSIPUG00000013414	GFI1	100	63.861	ENSLOCG00000004711	gfi1ab	100	63.861	Lepisosteus_oculatus
ENSIPUG00000013414	GFI1	100	58.768	ENSLAFG00000018346	GFI1	100	60.096	Loxodonta_africana
ENSIPUG00000013414	GFI1	100	58.005	ENSMFAG00000045801	GFI1	100	57.309	Macaca_fascicularis
ENSIPUG00000013414	GFI1	56	96.296	ENSMMUG00000005068	GFI1	100	96.296	Macaca_mulatta
ENSIPUG00000013414	GFI1	100	58.005	ENSMNEG00000036338	GFI1	100	57.309	Macaca_nemestrina
ENSIPUG00000013414	GFI1	100	58.005	ENSMLEG00000036181	GFI1	100	57.309	Mandrillus_leucophaeus
ENSIPUG00000013414	GFI1	100	61.634	ENSMAMG00000008125	gfi1ab	100	61.634	Mastacembelus_armatus
ENSIPUG00000013414	GFI1	100	62.624	ENSMZEG00005009895	gfi1ab	100	62.624	Maylandia_zebra
ENSIPUG00000013414	GFI1	87	61.648	ENSMGAG00000008187	GFI1	99	61.648	Meleagris_gallopavo
ENSIPUG00000013414	GFI1	56	96.296	ENSMAUG00000021273	-	100	96.296	Mesocricetus_auratus
ENSIPUG00000013414	GFI1	100	57.309	ENSMICG00000047208	GFI1	100	56.613	Microcebus_murinus
ENSIPUG00000013414	GFI1	56	96.296	ENSMOCG00000004478	-	100	96.296	Microtus_ochrogaster
ENSIPUG00000013414	GFI1	100	59.698	ENSMMOG00000005556	gfi1ab	100	59.698	Mola_mola
ENSIPUG00000013414	GFI1	100	57.710	ENSMODG00000011802	GFI1	100	57.944	Monodelphis_domestica
ENSIPUG00000013414	GFI1	100	59.596	ENSMALG00000014672	gfi1ab	100	59.596	Monopterus_albus
ENSIPUG00000013414	GFI1	100	58.065	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSIPUG00000013414	GFI1	100	57.309	ENSMUSG00000029275	Gfi1	100	59.155	Mus_musculus
ENSIPUG00000013414	GFI1	100	57.834	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSIPUG00000013414	GFI1	100	58.065	MGP_SPRETEiJ_G0028507	Gfi1	100	58.216	Mus_spretus
ENSIPUG00000013414	GFI1	100	62.374	ENSMPUG00000004178	GFI1	97	62.374	Mustela_putorius_furo
ENSIPUG00000013414	GFI1	100	57.710	ENSMLUG00000015191	GFI1	97	57.944	Myotis_lucifugus
ENSIPUG00000013414	GFI1	56	96.296	ENSNGAG00000002549	-	100	96.296	Nannospalax_galili
ENSIPUG00000013414	GFI1	100	62.162	ENSNBRG00000015774	gfi1ab	100	62.162	Neolamprologus_brichardi
ENSIPUG00000013414	GFI1	86	58.777	ENSNLEG00000010470	GFI1	92	58.777	Nomascus_leucogenys
ENSIPUG00000013414	GFI1	100	56.845	ENSOPRG00000001473	GFI1	100	56.613	Ochotona_princeps
ENSIPUG00000013414	GFI1	56	96.296	ENSODEG00000006410	-	100	96.296	Octodon_degus
ENSIPUG00000013414	GFI1	100	62.871	ENSONIG00000019246	gfi1ab	100	62.871	Oreochromis_niloticus
ENSIPUG00000013414	GFI1	55	96.154	ENSOANG00000022289	-	83	96.154	Ornithorhynchus_anatinus
ENSIPUG00000013414	GFI1	85	49.600	ENSOCUG00000023553	GFI1	93	49.600	Oryctolagus_cuniculus
ENSIPUG00000013414	GFI1	100	60.354	ENSORLG00000013806	gfi1ab	100	60.354	Oryzias_latipes
ENSIPUG00000013414	GFI1	100	59.398	ENSORLG00000005060	GFI1	100	59.398	Oryzias_latipes
ENSIPUG00000013414	GFI1	100	59.653	ENSORLG00020001602	gfi1ab	100	59.653	Oryzias_latipes_hni
ENSIPUG00000013414	GFI1	100	55.164	ENSORLG00020002817	GFI1	100	65.278	Oryzias_latipes_hni
ENSIPUG00000013414	GFI1	100	58.794	ENSORLG00015006070	GFI1	100	58.794	Oryzias_latipes_hsok
ENSIPUG00000013414	GFI1	100	59.398	ENSOMEG00000016722	GFI1	100	59.296	Oryzias_melastigma
ENSIPUG00000013414	GFI1	100	61.055	ENSOGAG00000027913	GFI1	100	61.055	Otolemur_garnettii
ENSIPUG00000013414	GFI1	100	60.101	ENSPPAG00000042186	GFI1	100	60.101	Pan_paniscus
ENSIPUG00000013414	GFI1	100	57.773	ENSPPRG00000007521	GFI1	100	57.077	Panthera_pardus
ENSIPUG00000013414	GFI1	100	58.237	ENSPTRG00000043053	GFI1	100	57.077	Pan_troglodytes
ENSIPUG00000013414	GFI1	100	58.005	ENSPANG00000016433	GFI1	100	57.309	Papio_anubis
ENSIPUG00000013414	GFI1	100	65.281	ENSPKIG00000004263	GFI1	100	65.281	Paramormyrops_kingsleyae
ENSIPUG00000013414	GFI1	88	62.360	ENSPSIG00000008734	GFI1	98	62.360	Pelodiscus_sinensis
ENSIPUG00000013414	GFI1	66	74.107	ENSPMGG00000011041	GFI1	82	74.107	Periophthalmus_magnuspinnatus
ENSIPUG00000013414	GFI1	100	62.563	ENSPMGG00000012546	gfi1ab	100	62.563	Periophthalmus_magnuspinnatus
ENSIPUG00000013414	GFI1	100	59.330	ENSPCIG00000013728	GFI1	100	59.809	Phascolarctos_cinereus
ENSIPUG00000013414	GFI1	100	59.902	ENSPFOG00000023214	gfi1ab	100	59.902	Poecilia_formosa
ENSIPUG00000013414	GFI1	100	59.413	ENSPLAG00000005376	GFI1	91	60.147	Poecilia_latipinna
ENSIPUG00000013414	GFI1	100	59.902	ENSPLAG00000010879	gfi1ab	96	78.378	Poecilia_latipinna
ENSIPUG00000013414	GFI1	100	59.951	ENSPMEG00000013694	gfi1ab	100	59.951	Poecilia_mexicana
ENSIPUG00000013414	GFI1	100	59.506	ENSPMEG00000019299	GFI1	100	60.000	Poecilia_mexicana
ENSIPUG00000013414	GFI1	78	77.143	ENSPREG00000007997	GFI1	89	77.143	Poecilia_reticulata
ENSIPUG00000013414	GFI1	100	59.852	ENSPREG00000014097	gfi1ab	100	59.852	Poecilia_reticulata
ENSIPUG00000013414	GFI1	100	46.313	ENSPCAG00000011020	GFI1	100	46.313	Procavia_capensis
ENSIPUG00000013414	GFI1	100	57.541	ENSPCOG00000020540	GFI1	100	56.613	Propithecus_coquereli
ENSIPUG00000013414	GFI1	100	57.746	ENSPVAG00000006928	GFI1	100	57.944	Pteropus_vampyrus
ENSIPUG00000013414	GFI1	100	62.624	ENSPNYG00000021183	gfi1ab	100	62.624	Pundamilia_nyererei
ENSIPUG00000013414	GFI1	100	72.658	ENSPNAG00000028014	GFI1	100	72.658	Pygocentrus_nattereri
ENSIPUG00000013414	GFI1	100	59.799	ENSPNAG00000027258	gfi1ab	100	59.799	Pygocentrus_nattereri
ENSIPUG00000013414	GFI1	100	57.541	ENSRNOG00000002042	Gfi1	100	58.920	Rattus_norvegicus
ENSIPUG00000013414	GFI1	100	58.005	ENSRBIG00000036467	GFI1	100	57.309	Rhinopithecus_bieti
ENSIPUG00000013414	GFI1	100	58.005	ENSRROG00000031687	GFI1	100	57.309	Rhinopithecus_roxellana
ENSIPUG00000013414	GFI1	100	57.773	ENSSBOG00000031300	GFI1	100	57.077	Saimiri_boliviensis_boliviensis
ENSIPUG00000013414	GFI1	100	63.840	ENSSFOG00015020295	gfi1	100	63.840	Scleropages_formosus
ENSIPUG00000013414	GFI1	100	61.809	ENSSMAG00000002782	gfi1ab	100	61.634	Scophthalmus_maximus
ENSIPUG00000013414	GFI1	100	60.202	ENSSDUG00000022410	gfi1ab	100	60.202	Seriola_dumerili
ENSIPUG00000013414	GFI1	100	60.697	ENSSLDG00000020163	gfi1ab	100	59.950	Seriola_lalandi_dorsalis
ENSIPUG00000013414	GFI1	81	75.676	ENSSPAG00000009140	gfi1ab	100	75.676	Stegastes_partitus
ENSIPUG00000013414	GFI1	100	57.339	ENSSSCG00000006902	GFI1	100	59.294	Sus_scrofa
ENSIPUG00000013414	GFI1	87	63.068	ENSTGUG00000006060	GFI1	99	63.068	Taeniopygia_guttata
ENSIPUG00000013414	GFI1	100	58.838	ENSTRUG00000000415	gfi1ab	100	60.202	Takifugu_rubripes
ENSIPUG00000013414	GFI1	100	60.197	ENSTNIG00000000651	gfi1ab	97	60.099	Tetraodon_nigroviridis
ENSIPUG00000013414	GFI1	100	58.178	ENSTTRG00000000082	GFI1	100	57.783	Tursiops_truncatus
ENSIPUG00000013414	GFI1	100	59.518	ENSUAMG00000021124	GFI1	91	60.482	Ursus_americanus
ENSIPUG00000013414	GFI1	56	96.296	ENSUMAG00000011251	-	100	96.296	Ursus_maritimus
ENSIPUG00000013414	GFI1	100	61.235	ENSXETG00000023006	gfi1	98	60.988	Xenopus_tropicalis
ENSIPUG00000013414	GFI1	56	79.817	ENSXCOG00000013213	-	56	79.817	Xiphophorus_couchianus
ENSIPUG00000013414	GFI1	100	59.113	ENSXMAG00000010523	gfi1ab	100	59.113	Xiphophorus_maculatus
ENSIPUG00000013414	GFI1	86	50.430	ENSXMAG00000009274	GFI1	70	52.841	Xiphophorus_maculatus