EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000013560 (Gene tree)
Gene ID: 108260654
Gene Symbol: gatb
Alias: pet112|pet112l|si:ch211-150a22.1|zgc:103736
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 9271 bases
Position: chr29:12375401-12384671
Accession: 108260654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000019983	GatB_Yqey	PF02637.18	1.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000020847	-	1653	XM_017461085	ENSIPUP00000019983	550 (aa)	XP_017316574	A0A2D0QE60

Gene Model

Click here to download ENSIPUG00000013560's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG
ipu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013560	gatb	90	65.524	ENSG00000059691	GATB	78	78.700	Homo_sapiens
ENSIPUG00000013560	gatb	100	69.510	ENSAPOG00000022676	gatb	100	69.510	Acanthochromis_polyacanthus
ENSIPUG00000013560	gatb	90	64.128	ENSAMEG00000018434	GATB	89	64.128	Ailuropoda_melanoleuca
ENSIPUG00000013560	gatb	79	71.625	ENSACIG00000015827	gatb	100	71.625	Amphilophus_citrinellus
ENSIPUG00000013560	gatb	90	73.185	ENSAOCG00000009635	gatb	95	73.185	Amphiprion_ocellaris
ENSIPUG00000013560	gatb	95	66.095	ENSAPEG00000023666	gatb	99	66.095	Amphiprion_percula
ENSIPUG00000013560	gatb	100	68.784	ENSATEG00000011821	gatb	100	68.784	Anabas_testudineus
ENSIPUG00000013560	gatb	90	69.838	ENSAPLG00000003933	GATB	99	69.838	Anas_platyrhynchos
ENSIPUG00000013560	gatb	92	67.787	ENSACAG00000002772	GATB	92	67.787	Anolis_carolinensis
ENSIPUG00000013560	gatb	90	65.323	ENSANAG00000020953	GATB	89	65.323	Aotus_nancymaae
ENSIPUG00000013560	gatb	81	72.667	ENSACLG00000026091	gatb	91	72.667	Astatotilapia_calliptera
ENSIPUG00000013560	gatb	91	75.050	ENSAMXG00000021662	gatb	90	75.050	Astyanax_mexicanus
ENSIPUG00000013560	gatb	91	64.400	ENSBTAG00000013914	GATB	90	64.400	Bos_taurus
ENSIPUG00000013560	gatb	90	65.121	ENSCJAG00000002147	GATB	89	65.121	Callithrix_jacchus
ENSIPUG00000013560	gatb	93	63.372	ENSCAFG00000008088	GATB	92	63.372	Canis_familiaris
ENSIPUG00000013560	gatb	90	65.517	ENSCAFG00020026686	GATB	84	71.078	Canis_lupus_dingo
ENSIPUG00000013560	gatb	90	65.323	ENSCHIG00000020111	GATB	89	65.323	Capra_hircus
ENSIPUG00000013560	gatb	90	66.331	ENSTSYG00000009976	GATB	89	66.331	Carlito_syrichta
ENSIPUG00000013560	gatb	87	59.539	ENSCAPG00000010977	GATB	89	59.539	Cavia_aperea
ENSIPUG00000013560	gatb	90	65.323	ENSCPOG00000005023	GATB	89	65.323	Cavia_porcellus
ENSIPUG00000013560	gatb	74	71.569	ENSCCAG00000021445	GATB	82	71.569	Cebus_capucinus
ENSIPUG00000013560	gatb	90	64.919	ENSCATG00000034281	GATB	89	64.919	Cercocebus_atys
ENSIPUG00000013560	gatb	90	65.524	ENSCLAG00000005772	GATB	86	70.905	Chinchilla_lanigera
ENSIPUG00000013560	gatb	90	64.919	ENSCSAG00000003318	GATB	89	64.919	Chlorocebus_sabaeus
ENSIPUG00000013560	gatb	90	64.516	ENSCHOG00000008476	GATB	89	64.516	Choloepus_hoffmanni
ENSIPUG00000013560	gatb	90	69.636	ENSCPBG00000025824	GATB	89	69.636	Chrysemys_picta_bellii
ENSIPUG00000013560	gatb	90	65.121	ENSCANG00000029227	GATB	89	65.121	Colobus_angolensis_palliatus
ENSIPUG00000013560	gatb	90	66.129	ENSCGRG00001024051	GATB	86	71.638	Cricetulus_griseus_chok1gshd
ENSIPUG00000013560	gatb	90	66.129	ENSCGRG00000012974	GATB	86	71.638	Cricetulus_griseus_crigri
ENSIPUG00000013560	gatb	100	69.510	ENSCSEG00000004009	gatb	100	71.167	Cynoglossus_semilaevis
ENSIPUG00000013560	gatb	100	65.464	ENSCVAG00000017180	gatb	99	72.379	Cyprinodon_variegatus
ENSIPUG00000013560	gatb	99	72.826	ENSDARG00000037309	gatb	99	72.826	Danio_rerio
ENSIPUG00000013560	gatb	90	65.060	ENSDNOG00000012683	GATB	89	65.060	Dasypus_novemcinctus
ENSIPUG00000013560	gatb	93	62.428	ENSDORG00000010241	Gatb	93	62.428	Dipodomys_ordii
ENSIPUG00000013560	gatb	89	45.436	FBgn0039153	GatB	94	45.436	Drosophila_melanogaster
ENSIPUG00000013560	gatb	91	44.930	ENSETEG00000002356	GATB	90	44.930	Echinops_telfairi
ENSIPUG00000013560	gatb	90	67.140	ENSEASG00005015868	GATB	88	67.140	Equus_asinus_asinus
ENSIPUG00000013560	gatb	90	65.112	ENSECAG00000003539	GATB	88	65.112	Equus_caballus
ENSIPUG00000013560	gatb	76	63.333	ENSEEUG00000002311	GATB	75	63.333	Erinaceus_europaeus
ENSIPUG00000013560	gatb	100	68.165	ENSELUG00000013584	gatb	98	72.366	Esox_lucius
ENSIPUG00000013560	gatb	92	64.902	ENSFCAG00000003207	GATB	91	64.902	Felis_catus
ENSIPUG00000013560	gatb	81	67.411	ENSFALG00000002209	GATB	99	67.411	Ficedula_albicollis
ENSIPUG00000013560	gatb	90	64.777	ENSFDAG00000006426	GATB	86	69.927	Fukomys_damarensis
ENSIPUG00000013560	gatb	100	69.147	ENSFHEG00000008643	GATB	100	69.147	Fundulus_heteroclitus
ENSIPUG00000013560	gatb	89	70.935	ENSGMOG00000001575	gatb	100	70.935	Gadus_morhua
ENSIPUG00000013560	gatb	94	67.761	ENSGALG00000010097	GATB	95	67.761	Gallus_gallus
ENSIPUG00000013560	gatb	100	67.818	ENSGAFG00000014422	gatb	100	67.818	Gambusia_affinis
ENSIPUG00000013560	gatb	89	72.709	ENSGACG00000017143	gatb	99	72.709	Gasterosteus_aculeatus
ENSIPUG00000013560	gatb	90	69.433	ENSGAGG00000007826	GATB	89	69.433	Gopherus_agassizii
ENSIPUG00000013560	gatb	90	65.323	ENSGGOG00000011099	GATB	89	65.323	Gorilla_gorilla
ENSIPUG00000013560	gatb	98	69.259	ENSHBUG00000009656	gatb	98	69.259	Haplochromis_burtoni
ENSIPUG00000013560	gatb	90	64.113	ENSHGLG00000001316	GATB	87	68.932	Heterocephalus_glaber_female
ENSIPUG00000013560	gatb	90	64.315	ENSHGLG00100004289	GATB	86	69.438	Heterocephalus_glaber_male
ENSIPUG00000013560	gatb	89	71.166	ENSHCOG00000006270	gatb	89	71.166	Hippocampus_comes
ENSIPUG00000013560	gatb	90	64.909	ENSSTOG00000005689	GATB	87	66.164	Ictidomys_tridecemlineatus
ENSIPUG00000013560	gatb	89	66.057	ENSJJAG00000016979	Gatb	86	71.111	Jaculus_jaculus
ENSIPUG00000013560	gatb	100	69.147	ENSKMAG00000004727	gatb	100	69.147	Kryptolebias_marmoratus
ENSIPUG00000013560	gatb	100	68.240	ENSLBEG00000019511	gatb	100	68.240	Labrus_bergylta
ENSIPUG00000013560	gatb	90	62.525	ENSLACG00000004352	GATB	96	63.489	Latimeria_chalumnae
ENSIPUG00000013560	gatb	100	59.571	ENSLOCG00000008564	gatb	100	59.571	Lepisosteus_oculatus
ENSIPUG00000013560	gatb	93	64.535	ENSLAFG00000022607	GATB	92	64.535	Loxodonta_africana
ENSIPUG00000013560	gatb	90	64.919	ENSMMUG00000011048	GATB	89	64.919	Macaca_mulatta
ENSIPUG00000013560	gatb	90	64.919	ENSMNEG00000040147	GATB	89	64.919	Macaca_nemestrina
ENSIPUG00000013560	gatb	90	65.121	ENSMLEG00000042135	GATB	89	65.121	Mandrillus_leucophaeus
ENSIPUG00000013560	gatb	100	68.240	ENSMAMG00000013256	gatb	100	68.240	Mastacembelus_armatus
ENSIPUG00000013560	gatb	100	68.784	ENSMZEG00005008495	gatb	100	68.784	Maylandia_zebra
ENSIPUG00000013560	gatb	90	70.385	ENSMGAG00000004276	GATB	97	70.385	Meleagris_gallopavo
ENSIPUG00000013560	gatb	90	66.331	ENSMAUG00000019099	Gatb	86	71.394	Mesocricetus_auratus
ENSIPUG00000013560	gatb	94	62.692	ENSMICG00000004311	GATB	92	62.692	Microcebus_murinus
ENSIPUG00000013560	gatb	90	65.121	ENSMOCG00000017566	Gatb	86	70.416	Microtus_ochrogaster
ENSIPUG00000013560	gatb	90	58.717	ENSMMOG00000005376	gatb	87	58.717	Mola_mola
ENSIPUG00000013560	gatb	90	67.071	ENSMODG00000001031	GATB	90	67.071	Monodelphis_domestica
ENSIPUG00000013560	gatb	98	67.712	ENSMALG00000003418	gatb	99	67.712	Monopterus_albus
ENSIPUG00000013560	gatb	94	63.148	MGP_CAROLIEiJ_G0025120	Gatb	92	66.972	Mus_caroli
ENSIPUG00000013560	gatb	94	63.269	ENSMUSG00000028085	Gatb	92	67.206	Mus_musculus
ENSIPUG00000013560	gatb	97	61.255	MGP_PahariEiJ_G0026563	Gatb	96	64.835	Mus_pahari
ENSIPUG00000013560	gatb	94	63.462	MGP_SPRETEiJ_G0026062	Gatb	93	63.462	Mus_spretus
ENSIPUG00000013560	gatb	92	64.314	ENSMPUG00000007394	GATB	91	64.314	Mustela_putorius_furo
ENSIPUG00000013560	gatb	90	66.129	ENSMLUG00000008194	GATB	89	66.129	Myotis_lucifugus
ENSIPUG00000013560	gatb	90	66.935	ENSNGAG00000002152	Gatb	86	71.883	Nannospalax_galili
ENSIPUG00000013560	gatb	79	72.210	ENSNBRG00000005947	gatb	100	72.210	Neolamprologus_brichardi
ENSIPUG00000013560	gatb	90	65.323	ENSNLEG00000005836	GATB	89	65.323	Nomascus_leucogenys
ENSIPUG00000013560	gatb	90	65.253	ENSMEUG00000001479	GATB	99	65.253	Notamacropus_eugenii
ENSIPUG00000013560	gatb	95	62.384	ENSOPRG00000011496	GATB	96	62.384	Ochotona_princeps
ENSIPUG00000013560	gatb	90	65.121	ENSODEG00000005429	GATB	87	69.976	Octodon_degus
ENSIPUG00000013560	gatb	100	69.147	ENSONIG00000010059	gatb	100	69.147	Oreochromis_niloticus
ENSIPUG00000013560	gatb	79	63.825	ENSOANG00000005282	GATB	99	63.825	Ornithorhynchus_anatinus
ENSIPUG00000013560	gatb	91	65.800	ENSOCUG00000016875	GATB	90	65.800	Oryctolagus_cuniculus
ENSIPUG00000013560	gatb	89	69.715	ENSORLG00000007740	gatb	99	69.715	Oryzias_latipes
ENSIPUG00000013560	gatb	99	67.514	ENSORLG00020016385	gatb	99	67.514	Oryzias_latipes_hni
ENSIPUG00000013560	gatb	99	67.455	ENSOMEG00000003089	gatb	99	67.455	Oryzias_melastigma
ENSIPUG00000013560	gatb	91	64.000	ENSOGAG00000014181	GATB	90	64.000	Otolemur_garnettii
ENSIPUG00000013560	gatb	90	64.930	ENSOARG00000004355	GATB	89	64.930	Ovis_aries
ENSIPUG00000013560	gatb	90	65.524	ENSPPAG00000041690	GATB	89	65.524	Pan_paniscus
ENSIPUG00000013560	gatb	92	64.902	ENSPPRG00000004993	GATB	91	64.902	Panthera_pardus
ENSIPUG00000013560	gatb	92	64.902	ENSPTIG00000021433	GATB	91	64.902	Panthera_tigris_altaica
ENSIPUG00000013560	gatb	90	62.097	ENSPTRG00000016513	GATB	89	62.097	Pan_troglodytes
ENSIPUG00000013560	gatb	90	62.298	ENSPANG00000024036	GATB	89	62.298	Papio_anubis
ENSIPUG00000013560	gatb	100	67.027	ENSPKIG00000017076	gatb	97	70.659	Paramormyrops_kingsleyae
ENSIPUG00000013560	gatb	90	68.219	ENSPSIG00000017832	GATB	90	68.219	Pelodiscus_sinensis
ENSIPUG00000013560	gatb	90	60.484	ENSPMGG00000016497	gatb	88	60.484	Periophthalmus_magnuspinnatus
ENSIPUG00000013560	gatb	90	65.524	ENSPEMG00000011096	Gatb	86	70.660	Peromyscus_maniculatus_bairdii
ENSIPUG00000013560	gatb	90	67.273	ENSPCIG00000015213	GATB	90	67.273	Phascolarctos_cinereus
ENSIPUG00000013560	gatb	100	67.450	ENSPFOG00000009933	gatb	100	67.450	Poecilia_formosa
ENSIPUG00000013560	gatb	100	68.000	ENSPLAG00000015569	gatb	100	68.000	Poecilia_latipinna
ENSIPUG00000013560	gatb	100	67.455	ENSPMEG00000006100	gatb	100	67.455	Poecilia_mexicana
ENSIPUG00000013560	gatb	100	67.636	ENSPREG00000000128	gatb	100	67.636	Poecilia_reticulata
ENSIPUG00000013560	gatb	90	65.927	ENSPPYG00000015121	GATB	89	65.927	Pongo_abelii
ENSIPUG00000013560	gatb	90	52.016	ENSPCAG00000005950	GATB	89	52.016	Procavia_capensis
ENSIPUG00000013560	gatb	94	62.885	ENSPCOG00000021777	GATB	94	62.885	Propithecus_coquereli
ENSIPUG00000013560	gatb	90	65.323	ENSPVAG00000006891	GATB	89	65.323	Pteropus_vampyrus
ENSIPUG00000013560	gatb	100	68.784	ENSPNYG00000013884	gatb	100	68.784	Pundamilia_nyererei
ENSIPUG00000013560	gatb	100	75.993	ENSPNAG00000020150	gatb	100	75.993	Pygocentrus_nattereri
ENSIPUG00000013560	gatb	98	60.623	ENSRNOG00000037655	Gatb	97	60.623	Rattus_norvegicus
ENSIPUG00000013560	gatb	90	65.323	ENSRBIG00000006453	GATB	89	65.323	Rhinopithecus_bieti
ENSIPUG00000013560	gatb	90	65.323	ENSRROG00000041575	GATB	89	65.323	Rhinopithecus_roxellana
ENSIPUG00000013560	gatb	88	31.166	YBL080C	-	92	31.166	Saccharomyces_cerevisiae
ENSIPUG00000013560	gatb	90	65.121	ENSSBOG00000022495	GATB	89	65.121	Saimiri_boliviensis_boliviensis
ENSIPUG00000013560	gatb	90	66.263	ENSSHAG00000011763	GATB	90	66.263	Sarcophilus_harrisii
ENSIPUG00000013560	gatb	100	67.568	ENSSFOG00015015565	gatb	98	67.568	Scleropages_formosus
ENSIPUG00000013560	gatb	100	68.240	ENSSMAG00000003609	gatb	76	68.240	Scophthalmus_maximus
ENSIPUG00000013560	gatb	99	68.909	ENSSDUG00000019847	gatb	99	68.909	Seriola_dumerili
ENSIPUG00000013560	gatb	90	71.515	ENSSLDG00000010253	gatb	95	71.515	Seriola_lalandi_dorsalis
ENSIPUG00000013560	gatb	65	67.273	ENSSARG00000003212	GATB	64	67.273	Sorex_araneus
ENSIPUG00000013560	gatb	89	68.024	ENSSPUG00000014453	GATB	97	66.865	Sphenodon_punctatus
ENSIPUG00000013560	gatb	90	73.387	ENSSPAG00000014465	gatb	99	73.387	Stegastes_partitus
ENSIPUG00000013560	gatb	90	65.323	ENSSSCG00000009015	GATB	99	63.616	Sus_scrofa
ENSIPUG00000013560	gatb	90	69.636	ENSTGUG00000004986	GATB	99	69.636	Taeniopygia_guttata
ENSIPUG00000013560	gatb	90	64.427	ENSTRUG00000015238	gatb	92	64.427	Takifugu_rubripes
ENSIPUG00000013560	gatb	74	69.608	ENSTNIG00000003378	gatb	99	69.608	Tetraodon_nigroviridis
ENSIPUG00000013560	gatb	78	47.209	ENSTBEG00000009804	GATB	87	47.209	Tupaia_belangeri
ENSIPUG00000013560	gatb	90	64.919	ENSTTRG00000010679	GATB	89	64.919	Tursiops_truncatus
ENSIPUG00000013560	gatb	90	64.919	ENSUAMG00000021441	GATB	89	64.919	Ursus_americanus
ENSIPUG00000013560	gatb	90	64.919	ENSUMAG00000016157	GATB	89	64.919	Ursus_maritimus
ENSIPUG00000013560	gatb	70	79.197	ENSVPAG00000010844	GATB	69	79.197	Vicugna_pacos
ENSIPUG00000013560	gatb	90	65.121	ENSVVUG00000025083	GATB	89	65.121	Vulpes_vulpes
ENSIPUG00000013560	gatb	88	67.901	ENSXETG00000034167	GATB	99	67.470	Xenopus_tropicalis
ENSIPUG00000013560	gatb	100	68.421	ENSXMAG00000008071	gatb	100	68.599	Xiphophorus_maculatus