EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000013691 (Gene tree)
Gene ID: 108273358
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 8091 bases
Position: chr12:19856589-19864679
Accession: 108273358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000020167	TAP_C	PF03943.13	8.1e-05	1	1
ENSIPUP00000020167	Exo_endo_phos	PF03372.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000021037	-	4125	XM_017482532	ENSIPUP00000020167	374 (aa)	XP_017338021	A0A2D0S6F8

Gene Model

Click here to download ENSIPUG00000013691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013691	tdp2b	94	53.824	ENSG00000111802	TDP2	94	53.463	Homo_sapiens
ENSIPUG00000013691	tdp2b	67	57.937	ENSAPOG00000018379	-	88	57.937	Acanthochromis_polyacanthus
ENSIPUG00000013691	tdp2b	72	56.934	ENSAMEG00000010230	TDP2	98	56.934	Ailuropoda_melanoleuca
ENSIPUG00000013691	tdp2b	68	57.752	ENSAPEG00000004208	-	92	57.752	Amphiprion_percula
ENSIPUG00000013691	tdp2b	72	54.710	ENSATEG00000010663	-	89	54.710	Anabas_testudineus
ENSIPUG00000013691	tdp2b	94	52.137	ENSACAG00000002332	TDP2	94	52.198	Anolis_carolinensis
ENSIPUG00000013691	tdp2b	94	53.073	ENSANAG00000020033	TDP2	92	53.073	Aotus_nancymaae
ENSIPUG00000013691	tdp2b	74	58.596	ENSACLG00000016132	tdp2b	96	58.596	Astatotilapia_calliptera
ENSIPUG00000013691	tdp2b	73	61.594	ENSACLG00000016148	tdp2b	97	61.594	Astatotilapia_calliptera
ENSIPUG00000013691	tdp2b	76	58.076	ENSACLG00000016174	tdp2b	98	58.076	Astatotilapia_calliptera
ENSIPUG00000013691	tdp2b	69	48.315	ENSAMXG00000036549	tdp2a	87	48.315	Astyanax_mexicanus
ENSIPUG00000013691	tdp2b	98	75.989	ENSAMXG00000011775	tdp2b	99	75.989	Astyanax_mexicanus
ENSIPUG00000013691	tdp2b	94	53.056	ENSBTAG00000000365	TDP2	97	52.128	Bos_taurus
ENSIPUG00000013691	tdp2b	94	54.958	ENSCJAG00000006074	TDP2	91	57.971	Callithrix_jacchus
ENSIPUG00000013691	tdp2b	94	54.108	ENSCJAG00000021963	-	92	54.108	Callithrix_jacchus
ENSIPUG00000013691	tdp2b	96	51.913	ENSCAFG00000010428	TDP2	94	58.029	Canis_familiaris
ENSIPUG00000013691	tdp2b	72	58.029	ENSCAFG00020009994	TDP2	94	58.029	Canis_lupus_dingo
ENSIPUG00000013691	tdp2b	79	53.741	ENSCHIG00000015294	-	93	57.246	Capra_hircus
ENSIPUG00000013691	tdp2b	87	51.235	ENSTSYG00000037199	TDP2	99	51.235	Carlito_syrichta
ENSIPUG00000013691	tdp2b	94	53.631	ENSCPOG00000006390	TDP2	93	53.631	Cavia_porcellus
ENSIPUG00000013691	tdp2b	94	53.352	ENSCCAG00000022734	TDP2	93	54.698	Cebus_capucinus
ENSIPUG00000013691	tdp2b	94	54.108	ENSCATG00000022076	TDP2	90	56.934	Cercocebus_atys
ENSIPUG00000013691	tdp2b	94	53.631	ENSCLAG00000002072	TDP2	93	53.631	Chinchilla_lanigera
ENSIPUG00000013691	tdp2b	94	54.108	ENSCSAG00000007769	TDP2	93	54.108	Chlorocebus_sabaeus
ENSIPUG00000013691	tdp2b	95	52.500	ENSCPBG00000006551	TDP2	86	52.500	Chrysemys_picta_bellii
ENSIPUG00000013691	tdp2b	94	53.824	ENSCANG00000040122	TDP2	96	53.463	Colobus_angolensis_palliatus
ENSIPUG00000013691	tdp2b	95	49.014	ENSCGRG00001000384	Tdp2	90	49.014	Cricetulus_griseus_chok1gshd
ENSIPUG00000013691	tdp2b	95	48.169	ENSCGRG00000010250	Tdp2	92	48.189	Cricetulus_griseus_crigri
ENSIPUG00000013691	tdp2b	99	65.416	ENSCVAG00000003114	tdp2b	99	65.416	Cyprinodon_variegatus
ENSIPUG00000013691	tdp2b	97	68.817	ENSDARG00000035954	tdp2b	96	68.817	Danio_rerio
ENSIPUG00000013691	tdp2b	72	51.119	ENSDARG00000069941	tdp2a	58	51.119	Danio_rerio
ENSIPUG00000013691	tdp2b	94	53.541	ENSDNOG00000044082	TDP2	91	53.541	Dasypus_novemcinctus
ENSIPUG00000013691	tdp2b	71	56.985	ENSETEG00000019096	TDP2	98	56.985	Echinops_telfairi
ENSIPUG00000013691	tdp2b	96	37.002	ENSEBUG00000006535	tdp2a	99	37.002	Eptatretus_burgeri
ENSIPUG00000013691	tdp2b	94	53.073	ENSEASG00005007656	TDP2	97	52.139	Equus_asinus_asinus
ENSIPUG00000013691	tdp2b	94	53.073	ENSECAG00000014264	TDP2	94	52.732	Equus_caballus
ENSIPUG00000013691	tdp2b	94	54.802	ENSEEUG00000010776	TDP2	92	54.802	Erinaceus_europaeus
ENSIPUG00000013691	tdp2b	95	68.533	ENSELUG00000016449	tdp2b	96	68.533	Esox_lucius
ENSIPUG00000013691	tdp2b	68	49.213	ENSELUG00000009321	tdp2a	78	49.407	Esox_lucius
ENSIPUG00000013691	tdp2b	98	52.432	ENSFCAG00000025612	TDP2	96	52.432	Felis_catus
ENSIPUG00000013691	tdp2b	94	50.281	ENSFALG00000004710	TDP2	93	51.124	Ficedula_albicollis
ENSIPUG00000013691	tdp2b	72	59.124	ENSFDAG00000006512	TDP2	94	59.124	Fukomys_damarensis
ENSIPUG00000013691	tdp2b	73	50.719	ENSFHEG00000013560	-	94	50.719	Fundulus_heteroclitus
ENSIPUG00000013691	tdp2b	95	51.111	ENSGALG00000013637	TDP2	91	51.667	Gallus_gallus
ENSIPUG00000013691	tdp2b	97	52.419	ENSGAGG00000002853	TDP2	88	52.419	Gopherus_agassizii
ENSIPUG00000013691	tdp2b	94	52.793	ENSGGOG00000014237	TDP2	91	56.522	Gorilla_gorilla
ENSIPUG00000013691	tdp2b	99	66.220	ENSHBUG00000002714	tdp2b	99	66.220	Haplochromis_burtoni
ENSIPUG00000013691	tdp2b	56	63.333	ENSHBUG00000005421	-	84	64.532	Haplochromis_burtoni
ENSIPUG00000013691	tdp2b	96	53.719	ENSHGLG00000008655	TDP2	95	53.719	Heterocephalus_glaber_female
ENSIPUG00000013691	tdp2b	96	53.444	ENSHGLG00100019087	TDP2	95	53.444	Heterocephalus_glaber_male
ENSIPUG00000013691	tdp2b	95	49.722	ENSJJAG00000021685	Tdp2	96	49.722	Jaculus_jaculus
ENSIPUG00000013691	tdp2b	70	55.133	ENSKMAG00000015485	-	83	55.133	Kryptolebias_marmoratus
ENSIPUG00000013691	tdp2b	96	53.804	ENSLACG00000008852	TDP2	95	53.804	Latimeria_chalumnae
ENSIPUG00000013691	tdp2b	73	65.455	ENSLOCG00000005817	tdp2b	99	65.455	Lepisosteus_oculatus
ENSIPUG00000013691	tdp2b	94	53.073	ENSLAFG00000002567	TDP2	95	53.073	Loxodonta_africana
ENSIPUG00000013691	tdp2b	94	54.108	ENSMFAG00000045296	TDP2	96	53.740	Macaca_fascicularis
ENSIPUG00000013691	tdp2b	94	54.108	ENSMMUG00000009803	TDP2	96	53.740	Macaca_mulatta
ENSIPUG00000013691	tdp2b	94	54.108	ENSMNEG00000038003	TDP2	96	53.740	Macaca_nemestrina
ENSIPUG00000013691	tdp2b	94	54.108	ENSMLEG00000028883	TDP2	96	53.740	Mandrillus_leucophaeus
ENSIPUG00000013691	tdp2b	98	67.120	ENSMAMG00000013654	tdp2b	98	66.757	Mastacembelus_armatus
ENSIPUG00000013691	tdp2b	71	58.582	ENSMZEG00005004103	tdp2b	89	58.582	Maylandia_zebra
ENSIPUG00000013691	tdp2b	72	57.823	ENSMZEG00005004077	tdp2b	99	57.823	Maylandia_zebra
ENSIPUG00000013691	tdp2b	64	57.317	ENSMZEG00005003980	-	80	57.317	Maylandia_zebra
ENSIPUG00000013691	tdp2b	99	64.611	ENSMZEG00005003950	tdp2b	99	64.611	Maylandia_zebra
ENSIPUG00000013691	tdp2b	76	60.417	ENSMZEG00005004126	tdp2b	98	60.417	Maylandia_zebra
ENSIPUG00000013691	tdp2b	68	61.479	ENSMZEG00005004055	tdp2b	84	61.479	Maylandia_zebra
ENSIPUG00000013691	tdp2b	70	61.597	ENSMZEG00005004153	tdp2b	92	61.597	Maylandia_zebra
ENSIPUG00000013691	tdp2b	95	52.222	ENSMGAG00000008014	TDP2	91	52.222	Meleagris_gallopavo
ENSIPUG00000013691	tdp2b	94	49.721	ENSMAUG00000014451	Tdp2	90	48.883	Mesocricetus_auratus
ENSIPUG00000013691	tdp2b	94	53.631	ENSMICG00000000039	TDP2	93	57.091	Microcebus_murinus
ENSIPUG00000013691	tdp2b	94	50.000	ENSMOCG00000002823	Tdp2	90	50.000	Microtus_ochrogaster
ENSIPUG00000013691	tdp2b	89	52.754	ENSMODG00000011653	TDP2	95	54.819	Monodelphis_domestica
ENSIPUG00000013691	tdp2b	66	60.400	ENSMALG00000005368	-	84	60.400	Monopterus_albus
ENSIPUG00000013691	tdp2b	94	51.412	MGP_CAROLIEiJ_G0018354	Tdp2	90	51.130	Mus_caroli
ENSIPUG00000013691	tdp2b	94	50.282	ENSMUSG00000035958	Tdp2	90	50.282	Mus_musculus
ENSIPUG00000013691	tdp2b	94	47.740	MGP_PahariEiJ_G0019417	Tdp2	90	47.740	Mus_pahari
ENSIPUG00000013691	tdp2b	94	50.282	MGP_SPRETEiJ_G0019220	Tdp2	89	50.282	Mus_spretus
ENSIPUG00000013691	tdp2b	94	54.469	ENSMPUG00000004516	TDP2	97	53.763	Mustela_putorius_furo
ENSIPUG00000013691	tdp2b	94	48.876	ENSMLUG00000013506	TDP2	92	49.438	Myotis_lucifugus
ENSIPUG00000013691	tdp2b	97	47.802	ENSNGAG00000001375	Tdp2	93	47.802	Nannospalax_galili
ENSIPUG00000013691	tdp2b	94	53.824	ENSNLEG00000002447	TDP2	94	53.824	Nomascus_leucogenys
ENSIPUG00000013691	tdp2b	95	54.144	ENSOPRG00000016299	TDP2	97	54.144	Ochotona_princeps
ENSIPUG00000013691	tdp2b	72	59.489	ENSODEG00000014018	TDP2	93	59.489	Octodon_degus
ENSIPUG00000013691	tdp2b	97	53.243	ENSOCUG00000013773	TDP2	95	53.243	Oryctolagus_cuniculus
ENSIPUG00000013691	tdp2b	68	54.864	ENSORLG00000001661	-	94	54.864	Oryzias_latipes
ENSIPUG00000013691	tdp2b	72	51.590	ENSORLG00020004634	-	94	54.864	Oryzias_latipes_hni
ENSIPUG00000013691	tdp2b	71	45.926	ENSORLG00015008190	-	98	45.926	Oryzias_latipes_hsok
ENSIPUG00000013691	tdp2b	71	52.256	ENSOMEG00000015899	-	92	53.629	Oryzias_melastigma
ENSIPUG00000013691	tdp2b	94	53.352	ENSOGAG00000025303	TDP2	91	53.352	Otolemur_garnettii
ENSIPUG00000013691	tdp2b	94	53.541	ENSPPAG00000029023	TDP2	94	53.186	Pan_paniscus
ENSIPUG00000013691	tdp2b	98	52.703	ENSPPRG00000015398	TDP2	96	52.703	Panthera_pardus
ENSIPUG00000013691	tdp2b	72	57.664	ENSPTIG00000018574	TDP2	94	57.664	Panthera_tigris_altaica
ENSIPUG00000013691	tdp2b	94	53.541	ENSPTRG00000017778	TDP2	94	53.186	Pan_troglodytes
ENSIPUG00000013691	tdp2b	94	54.674	ENSPANG00000017590	TDP2	96	54.294	Papio_anubis
ENSIPUG00000013691	tdp2b	98	65.229	ENSPKIG00000006483	tdp2b	97	65.229	Paramormyrops_kingsleyae
ENSIPUG00000013691	tdp2b	72	57.721	ENSPSIG00000004948	TDP2	94	57.721	Pelodiscus_sinensis
ENSIPUG00000013691	tdp2b	94	51.955	ENSPEMG00000001788	Tdp2	90	51.955	Peromyscus_maniculatus_bairdii
ENSIPUG00000013691	tdp2b	68	43.911	ENSPMAG00000001570	tdp2b	99	45.018	Petromyzon_marinus
ENSIPUG00000013691	tdp2b	95	52.909	ENSPCIG00000007316	TDP2	89	52.329	Phascolarctos_cinereus
ENSIPUG00000013691	tdp2b	72	50.182	ENSPFOG00000017990	-	99	50.182	Poecilia_formosa
ENSIPUG00000013691	tdp2b	70	52.256	ENSPLAG00000019439	-	83	52.256	Poecilia_latipinna
ENSIPUG00000013691	tdp2b	73	50.538	ENSPMEG00000010824	-	92	50.538	Poecilia_mexicana
ENSIPUG00000013691	tdp2b	94	53.824	ENSPPYG00000016282	TDP2	87	53.463	Pongo_abelii
ENSIPUG00000013691	tdp2b	94	52.235	ENSPCOG00000021415	TDP2	96	56.204	Propithecus_coquereli
ENSIPUG00000013691	tdp2b	99	64.611	ENSPNYG00000011532	tdp2b	99	64.611	Pundamilia_nyererei
ENSIPUG00000013691	tdp2b	70	58.781	ENSPNYG00000011504	tdp2b	90	58.781	Pundamilia_nyererei
ENSIPUG00000013691	tdp2b	66	53.846	ENSPNAG00000022162	tdp2a	63	53.846	Pygocentrus_nattereri
ENSIPUG00000013691	tdp2b	93	50.000	ENSRNOG00000018246	Tdp2	89	50.000	Rattus_norvegicus
ENSIPUG00000013691	tdp2b	94	53.541	ENSRBIG00000037119	TDP2	96	53.186	Rhinopithecus_bieti
ENSIPUG00000013691	tdp2b	94	53.258	ENSRROG00000005025	TDP2	90	56.204	Rhinopithecus_roxellana
ENSIPUG00000013691	tdp2b	94	52.793	ENSSBOG00000028734	TDP2	93	54.027	Saimiri_boliviensis_boliviensis
ENSIPUG00000013691	tdp2b	99	51.613	ENSSHAG00000002506	TDP2	94	51.613	Sarcophilus_harrisii
ENSIPUG00000013691	tdp2b	68	54.150	ENSSFOG00015011322	-	71	53.360	Scleropages_formosus
ENSIPUG00000013691	tdp2b	72	56.679	ENSSARG00000013547	TDP2	99	56.679	Sorex_araneus
ENSIPUG00000013691	tdp2b	96	52.235	ENSSPUG00000008288	TDP2	95	52.235	Sphenodon_punctatus
ENSIPUG00000013691	tdp2b	94	53.352	ENSSSCG00000001092	TDP2	94	53.005	Sus_scrofa
ENSIPUG00000013691	tdp2b	69	57.198	ENSTGUG00000009035	TDP2	98	57.198	Taeniopygia_guttata
ENSIPUG00000013691	tdp2b	96	66.482	ENSTRUG00000014347	tdp2b	96	66.482	Takifugu_rubripes
ENSIPUG00000013691	tdp2b	68	57.471	ENSTRUG00000012218	-	91	57.471	Takifugu_rubripes
ENSIPUG00000013691	tdp2b	68	57.143	ENSTNIG00000010260	TDP2	98	57.143	Tetraodon_nigroviridis
ENSIPUG00000013691	tdp2b	96	66.482	ENSTNIG00000017792	tdp2b	96	66.482	Tetraodon_nigroviridis
ENSIPUG00000013691	tdp2b	94	52.793	ENSTTRG00000016376	TDP2	94	52.459	Tursiops_truncatus
ENSIPUG00000013691	tdp2b	97	49.596	ENSUAMG00000025939	TDP2	97	49.596	Ursus_americanus
ENSIPUG00000013691	tdp2b	72	56.569	ENSUMAG00000020111	TDP2	91	56.569	Ursus_maritimus
ENSIPUG00000013691	tdp2b	95	54.696	ENSXETG00000014826	tdp2	93	54.696	Xenopus_tropicalis
ENSIPUG00000013691	tdp2b	66	54.582	ENSXCOG00000010778	-	69	54.582	Xiphophorus_couchianus
ENSIPUG00000013691	tdp2b	66	54.582	ENSXMAG00000022252	-	72	54.582	Xiphophorus_maculatus